RNA–Protein interactions for RNA: ENST00000485023.1

DDR1-246, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-246ENST00000485023 XRCC6P12956 609 aaKnown RBP eCLIP18.04■□□□□ 0.48
DDR1-246ENST00000485023 ZSCAN20P17040 1043 aaPredicted RBP18.04■□□□□ 0.48
DDR1-246ENST00000485023 SARSP49591 514 aaKnown RBP18.04■□□□□ 0.48
DDR1-246ENST00000485023 GRIN1Q05586 938 aa18.04■□□□□ 0.48
DDR1-246ENST00000485023 CAPSQ13938 189 aa18.04■□□□□ 0.48
DDR1-246ENST00000485023 ADGRE1Q14246 886 aa18.04■□□□□ 0.48
DDR1-246ENST00000485023 DSC3Q14574 896 aa18.04■□□□□ 0.48
DDR1-246ENST00000485023 RNF169Q8NCN4 708 aa18.04■□□□□ 0.48
DDR1-246ENST00000485023 SP7Q8TDD2 431 aaPredicted RBP18.04■□□□□ 0.48
DDR1-246ENST00000485023 MMTAG2Q9BU76 263 aaKnown RBP18.04■□□□□ 0.48
DDR1-246ENST00000485023 MINDY3Q9H8M7 445 aa18.04■□□□□ 0.48
DDR1-246ENST00000485023 POLD4Q9HCU8 107 aa18.04■□□□□ 0.48
DDR1-246ENST00000485023 C1orf112Q9NSG2 853 aa18.04■□□□□ 0.48
DDR1-246ENST00000485023 PIN4Q9Y237 131 aaKnown RBP18.04■□□□□ 0.48
DDR1-246ENST00000485023 PCDHB7Q9Y5E2 793 aa18.04■□□□□ 0.48
DDR1-246ENST00000485023 DGKIO75912 1065 aa18.03■□□□□ 0.48
DDR1-246ENST00000485023 BMP15O95972 392 aa18.03■□□□□ 0.48
DDR1-246ENST00000485023 STAG3L1P0CL83 205 aa18.03■□□□□ 0.48
DDR1-246ENST00000485023 GLRA2P23416 452 aa18.03■□□□□ 0.48
DDR1-246ENST00000485023 ARL2P36404 184 aa18.03■□□□□ 0.48
DDR1-246ENST00000485023 PHKA2P46019 1235 aa18.03■□□□□ 0.48
DDR1-246ENST00000485023 BTG3Q14201 252 aaPredicted RBP18.03■□□□□ 0.48
DDR1-246ENST00000485023 FOXD4L6Q3SYB3 417 aaPredicted RBP18.03■□□□□ 0.48
DDR1-246ENST00000485023 ARL6IP4Q66PJ3 421 aaKnown RBP18.03■□□□□ 0.48
DDR1-246ENST00000485023 FOXD4L3Q6VB84 417 aaPredicted RBP18.03■□□□□ 0.48
DDR1-246ENST00000485023 SLC24A5Q71RS6 500 aa18.03■□□□□ 0.48
DDR1-246ENST00000485023 KCNK18Q7Z418 384 aa18.03■□□□□ 0.48
DDR1-246ENST00000485023 MICALL1Q8N3F8 863 aa18.03■□□□□ 0.48
DDR1-246ENST00000485023 GDPD5Q8WTR4 605 aa18.03■□□□□ 0.48
DDR1-246ENST00000485023 CDK5RAP3Q96JB5 506 aa18.03■□□□□ 0.48
DDR1-246ENST00000485023 TGS1Q96RS0 853 aaKnown RBP18.03■□□□□ 0.48
DDR1-246ENST00000485023 STK24Q9Y6E0 443 aa18.03■□□□□ 0.48
DDR1-246ENST00000485023 COL4A4P53420 1690 aaPredicted RBP18.03■□□□□ 0.48
DDR1-246ENST00000485023 COL4A6Q14031 1691 aa18.03■□□□□ 0.48
DDR1-246ENST00000485023 CUL9Q8IWT3 2517 aa18.02■□□□□ 0.48
DDR1-246ENST00000485023 C9IYK1 514 aa18.02■□□□□ 0.48
DDR1-246ENST00000485023 SSBP05455 408 aaKnown RBP eCLIP18.02■□□□□ 0.48
DDR1-246ENST00000485023 FGFR1P11362 822 aa18.02■□□□□ 0.48
DDR1-246ENST00000485023 MUTP22033 750 aa18.02■□□□□ 0.48
DDR1-246ENST00000485023 MARCKSP29966 332 aaPredicted RBP18.02■□□□□ 0.48
DDR1-246ENST00000485023 TFDP1Q14186 410 aa18.02■□□□□ 0.48
DDR1-246ENST00000485023 MXD4Q14582 209 aaPredicted RBP18.02■□□□□ 0.48
DDR1-246ENST00000485023 CABP7Q86V35 215 aa18.02■□□□□ 0.48
DDR1-246ENST00000485023 FIBCD1Q8N539 461 aa18.02■□□□□ 0.48
DDR1-246ENST00000485023 MCPH1Q8NEM0 835 aa18.02■□□□□ 0.48
DDR1-246ENST00000485023 PPM1EQ8WY54 764 aa18.02■□□□□ 0.48
DDR1-246ENST00000485023 PNMA5Q96PV4 448 aa18.02■□□□□ 0.48
DDR1-246ENST00000485023 USP28Q96RU2 1077 aa18.02■□□□□ 0.48
DDR1-246ENST00000485023 INO80BQ9C086 356 aaPredicted RBP18.02■□□□□ 0.48
DDR1-246ENST00000485023 RC3H2Q9HBD1 1191 aaKnown RBP18.02■□□□□ 0.48
DDR1-246ENST00000485023 DNM3Q9UQ16 869 aa18.02■□□□□ 0.48
DDR1-246ENST00000485023 LRRIQ4A6NIV6 560 aa18.01■□□□□ 0.47
DDR1-246ENST00000485023 INO80B-WBP1J3KQ70 363 aa18.01■□□□□ 0.47
DDR1-246ENST00000485023 ASAP2O43150 1006 aa18.01■□□□□ 0.47
DDR1-246ENST00000485023 ERVK-21P61565 698 aa18.01■□□□□ 0.47
DDR1-246ENST00000485023 GRB10Q13322 594 aa18.01■□□□□ 0.47
DDR1-246ENST00000485023 PKP1Q13835 747 aa18.01■□□□□ 0.47
DDR1-246ENST00000485023 PTPAQ15257 358 aa18.01■□□□□ 0.47
DDR1-246ENST00000485023 LONRF3Q496Y0 759 aa18.01■□□□□ 0.47
DDR1-246ENST00000485023 TWF2Q6IBS0 349 aaKnown RBP18.01■□□□□ 0.47
DDR1-246ENST00000485023 CRIPAKQ8N1N5 446 aa18.01■□□□□ 0.47
DDR1-246ENST00000485023 RASSF8Q8NHQ8 419 aa18.01■□□□□ 0.47
DDR1-246ENST00000485023 MAFAQ8NHW3 353 aaPredicted RBP18.01■□□□□ 0.47
DDR1-246ENST00000485023 ZSCAN16Q9H4T2 348 aaPredicted RBP18.01■□□□□ 0.47
DDR1-246ENST00000485023 ERLIN2O94905 339 aa18■□□□□ 0.47
DDR1-246ENST00000485023 EYA4O95677 639 aa18■□□□□ 0.47
DDR1-246ENST00000485023 CYP11B2P19099 503 aa18■□□□□ 0.47
DDR1-246ENST00000485023 UBA7P41226 1012 aa18■□□□□ 0.47
DDR1-246ENST00000485023 CCDC85BQ15834 202 aaPredicted RBP18■□□□□ 0.47
DDR1-246ENST00000485023 SPECC1Q5M775 1068 aa18■□□□□ 0.47
DDR1-246ENST00000485023 SRGAP1Q7Z6B7 1085 aa18■□□□□ 0.47
DDR1-246ENST00000485023 FBXO22Q8NEZ5 403 aa18■□□□□ 0.47
DDR1-246ENST00000485023 BSNDQ8WZ55 320 aa18■□□□□ 0.47
DDR1-246ENST00000485023 ZNF689Q96CS4 500 aaPredicted RBP18■□□□□ 0.47
DDR1-246ENST00000485023 RUSC1Q9BVN2 902 aa18■□□□□ 0.47
DDR1-246ENST00000485023 AGPAT5Q9NUQ2 364 aa18■□□□□ 0.47
DDR1-246ENST00000485023 TMEM161AQ9NX61 479 aa18■□□□□ 0.47
DDR1-246ENST00000485023 MRPL42Q9Y6G3 142 aaKnown RBP18■□□□□ 0.47
DDR1-246ENST00000485023 TBKBP1A7MCY6 615 aa17.99■□□□□ 0.47
DDR1-246ENST00000485023 CSPG5O95196 566 aa17.99■□□□□ 0.47
DDR1-246ENST00000485023 ZSCAN22P10073 491 aaPredicted RBP17.99■□□□□ 0.47
DDR1-246ENST00000485023 LIG1P18858 919 aa17.99■□□□□ 0.47
DDR1-246ENST00000485023 CTNNB1P35222 781 aa17.99■□□□□ 0.47
DDR1-246ENST00000485023 PTENP60484 403 aa17.99■□□□□ 0.47
DDR1-246ENST00000485023 MBTD1Q05BQ5 628 aa17.99■□□□□ 0.47
DDR1-246ENST00000485023 EPC2Q52LR7 807 aa17.99■□□□□ 0.47
DDR1-246ENST00000485023 ECHDC2Q86YB7 292 aa17.99■□□□□ 0.47
DDR1-246ENST00000485023 TMEM192Q8IY95 271 aa17.99■□□□□ 0.47
DDR1-246ENST00000485023 AK8Q96MA6 479 aa17.99■□□□□ 0.47
DDR1-246ENST00000485023 CLIC6Q96NY7 704 aa17.99■□□□□ 0.47
DDR1-246ENST00000485023 CSRNP2Q9H175 543 aa17.99■□□□□ 0.47
DDR1-246ENST00000485023 DACT1Q9NYF0 836 aa17.99■□□□□ 0.47
DDR1-246ENST00000485023 HCSTQ9UBK5 93 aa17.99■□□□□ 0.47
DDR1-246ENST00000485023 DAXXQ9UER7 740 aaPredicted RBP17.99■□□□□ 0.47
DDR1-246ENST00000485023 FBXO2Q9UK22 296 aaPredicted RBP17.99■□□□□ 0.47
DDR1-246ENST00000485023 CHD7Q9P2D1 2997 aa17.99■□□□□ 0.47
DDR1-246ENST00000485023 TTC3P53804 2025 aa17.98■□□□□ 0.47
DDR1-246ENST00000485023 TSPAN1O60635 241 aa17.98■□□□□ 0.47
DDR1-246ENST00000485023 LONP1P36776 959 aaKnown RBP17.98■□□□□ 0.47
DDR1-246ENST00000485023 FAM189BP81408 668 aa17.98■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms