RNA–Protein interactions for RNA: ENST00000480127.1

COL17A1-205, Transcript of collagen type XVII alpha 1 chain, humanhuman

TSL 3

Gene COL17A1, Length 420 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL17A1-205ENST00000480127 FEZF2Q8TBJ5 459 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 BBXQ8WY36 941 aaPredicted RBP7.98□□□□□ -1.13
COL17A1-205ENST00000480127 NKD2Q969F2 451 aaPredicted RBP7.98□□□□□ -1.13
COL17A1-205ENST00000480127 ZNF558Q96NG5 402 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 TEKT3Q9BXF9 490 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 RNF26Q9BY78 433 aaPredicted RBP7.98□□□□□ -1.13
COL17A1-205ENST00000480127 BRMS1Q9HCU9 246 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 PDRG1Q9NUG6 133 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 LIMD1Q9UGP4 676 aa7.98□□□□□ -1.13
COL17A1-205ENST00000480127 SEPT9Q9UHD8 586 aaPredicted RBP7.98□□□□□ -1.13
COL17A1-205ENST00000480127 ESYT2A0FGR8 921 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 FAM86B1E9PN63 330 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 MAGEB2O15479 319 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 DHX15O43143 795 aaKnown RBP7.97□□□□□ -1.13
COL17A1-205ENST00000480127 HOXA2O43364 376 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 PI15O43692 258 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 EIF5BO60841 1220 aaKnown RBP7.97□□□□□ -1.13
COL17A1-205ENST00000480127 VTNP04004 478 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 FAM86B2P0C5J1 330 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 NPR3P17342 541 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 SFNP31947 248 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 PPM1AP35813 382 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 MTHFRP42898 656 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 ID4P47928 161 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 JAK3P52333 1124 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 PRKCEQ02156 737 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 KRT17Q04695 432 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 TRIM29Q14134 588 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 SMC1AQ14683 1233 aaKnown RBP7.97□□□□□ -1.13
COL17A1-205ENST00000480127 CLLU1OSQ5K130 101 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 TYW1BQ6NUM6 668 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 EFCAB12Q6NXP0 572 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 KANK3Q6NY19 840 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 RUFY3Q7L099 469 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 ECHDC2Q86YB7 292 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 ADSSL1Q8N142 457 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 LRRC43Q8N309 656 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 C12orf76Q8N812 135 aaPredicted RBP7.97□□□□□ -1.13
COL17A1-205ENST00000480127 LARP6Q9BRS8 491 aaKnown RBP7.97□□□□□ -1.13
COL17A1-205ENST00000480127 ZMYND12Q9H0C1 365 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 DISC1Q9NRI5 854 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 SPG21Q9NZD8 308 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 SPTBN4Q9H254 2564 aa7.97□□□□□ -1.13
COL17A1-205ENST00000480127 DDX11L8A8MPP1 907 aa7.96□□□□□ -1.14
COL17A1-205ENST00000480127 DEXIO95424 95 aa7.96□□□□□ -1.14
COL17A1-205ENST00000480127 OATP04181 439 aa7.96□□□□□ -1.14
COL17A1-205ENST00000480127 CYP3A4P08684 503 aa7.96□□□□□ -1.14
COL17A1-205ENST00000480127 IFNAR1P17181 557 aa7.96□□□□□ -1.14
COL17A1-205ENST00000480127 CLCN3P51790 818 aa7.96□□□□□ -1.14
COL17A1-205ENST00000480127 NLRP11P59045 1033 aaKnown RBP7.96□□□□□ -1.14
COL17A1-205ENST00000480127 RNASELQ05823 741 aaKnown RBP7.96□□□□□ -1.14
COL17A1-205ENST00000480127 FUT2Q10981 343 aa7.96□□□□□ -1.14
COL17A1-205ENST00000480127 GNL2Q13823 731 aaKnown RBP7.96□□□□□ -1.14
COL17A1-205ENST00000480127 NONOQ15233 471 aaKnown RBP eCLIP7.96□□□□□ -1.14
COL17A1-205ENST00000480127 LETM2Q2VYF4 491 aa7.96□□□□□ -1.14
COL17A1-205ENST00000480127 MTERF2Q49AM1 385 aa7.96□□□□□ -1.14
COL17A1-205ENST00000480127 RARS2Q5T160 578 aaKnown RBP7.96□□□□□ -1.14
COL17A1-205ENST00000480127 KIAA1841Q6NSI8 718 aa7.96□□□□□ -1.14
COL17A1-205ENST00000480127 ZNF598Q86UK7 904 aaKnown RBP7.96□□□□□ -1.14
COL17A1-205ENST00000480127 LRRC71Q8N4P6 559 aa7.96□□□□□ -1.14
COL17A1-205ENST00000480127 LINC01465Q8N7H1 131 aa7.96□□□□□ -1.14
COL17A1-205ENST00000480127 TDRD5Q8NAT2 981 aaKnown RBP7.96□□□□□ -1.14
COL17A1-205ENST00000480127 TBCKQ8TEA7 893 aa7.96□□□□□ -1.14
COL17A1-205ENST00000480127 SLC22A17Q8WUG5 538 aa7.96□□□□□ -1.14
COL17A1-205ENST00000480127 WASF1Q92558 559 aa7.96□□□□□ -1.14
COL17A1-205ENST00000480127 ZNF668Q96K58 619 aaPredicted RBP7.96□□□□□ -1.14
COL17A1-205ENST00000480127 ADAMTS10Q9H324 1103 aa7.96□□□□□ -1.14
COL17A1-205ENST00000480127 SH3GLB2Q9NR46 395 aa7.96□□□□□ -1.14
COL17A1-205ENST00000480127 PCDHA4Q9UN74 947 aa7.96□□□□□ -1.14
COL17A1-205ENST00000480127 USTQ9Y2C2 406 aa7.96□□□□□ -1.14
COL17A1-205ENST00000480127 PTPRZ1P23471 2315 aaPredicted RBP7.96□□□□□ -1.14
COL17A1-205ENST00000480127 MYO15AQ9UKN7 3530 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 IGLV3-22A0A075B6J6 115 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 A0A0U1RQF3 1178 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 NT5C1B-RDH14C9J2C7 533 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 DKC1O60832 514 aaKnown RBP eCLIP7.95□□□□□ -1.14
COL17A1-205ENST00000480127 BAG4O95429 457 aaKnown RBP7.95□□□□□ -1.14
COL17A1-205ENST00000480127 CXCL14O95715 111 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 EOMESO95936 686 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 EPCAMP16422 314 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 AOC1P19801 751 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 SFPQP23246 707 aaKnown RBP eCLIP7.95□□□□□ -1.14
COL17A1-205ENST00000480127 EIF4BP23588 611 aaKnown RBP7.95□□□□□ -1.14
COL17A1-205ENST00000480127 PDIA3P30101 505 aaKnown RBP7.95□□□□□ -1.14
COL17A1-205ENST00000480127 CLK2P49760 499 aaKnown RBP7.95□□□□□ -1.14
COL17A1-205ENST00000480127 USP11P51784 963 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 FOSBP53539 338 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 ANKRD1Q15327 319 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 ATAT1Q5SQI0 421 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 TWF2Q6IBS0 349 aaKnown RBP7.95□□□□□ -1.14
COL17A1-205ENST00000480127 KRT25Q7Z3Z0 450 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 TMEM173Q86WV6 379 aaPredicted RBP7.95□□□□□ -1.14
COL17A1-205ENST00000480127 CCDC105Q8IYK2 499 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 BLIDQ8IZY5 108 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 ZNF710Q8N1W2 664 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 PLCD3Q8N3E9 789 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 FLCNQ8NFG4 579 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 HELQQ8TDG4 1101 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 AUTS2Q8WXX7 1259 aa7.95□□□□□ -1.14
COL17A1-205ENST00000480127 JPH2Q9BR39 696 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms