RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 SEC63Q9UGP8 760 aaKnown RBP11.07□□□□□ -0.64
GPNMB-211ENST00000479625 FBXL21Q9UKT6 434 aa11.07□□□□□ -0.64
GPNMB-211ENST00000479625 PCDHA6Q9UN73 950 aa11.07□□□□□ -0.64
GPNMB-211ENST00000479625 USTQ9Y2C2 406 aa11.07□□□□□ -0.64
GPNMB-211ENST00000479625 PCDHA8Q9Y5H6 950 aa11.07□□□□□ -0.64
GPNMB-211ENST00000479625 COL1A2P08123 1366 aa11.06□□□□□ -0.64
GPNMB-211ENST00000479625 ERICH2A1L162 156 aa11.06□□□□□ -0.64
GPNMB-211ENST00000479625 SPDYE3A6NKU9 549 aa11.06□□□□□ -0.64
GPNMB-211ENST00000479625 ZBTB42B2RXF5 422 aa11.06□□□□□ -0.64
GPNMB-211ENST00000479625 CCNE2O96020 404 aa11.06□□□□□ -0.64
GPNMB-211ENST00000479625 CFHP08603 1231 aa11.06□□□□□ -0.64
GPNMB-211ENST00000479625 CYP21A2P08686 494 aa11.06□□□□□ -0.64
GPNMB-211ENST00000479625 RXRAP19793 462 aa11.06□□□□□ -0.64
GPNMB-211ENST00000479625 TRDNQ13061 729 aa11.06□□□□□ -0.64
GPNMB-211ENST00000479625 TDGQ13569 410 aa11.06□□□□□ -0.64
GPNMB-211ENST00000479625 CATIPQ7Z7H3 387 aa11.06□□□□□ -0.64
GPNMB-211ENST00000479625 HELQQ8TDG4 1101 aa11.06□□□□□ -0.64
GPNMB-211ENST00000479625 TNPO1Q92973 898 aaKnown RBP11.06□□□□□ -0.64
GPNMB-211ENST00000479625 ZNF668Q96K58 619 aaPredicted RBP11.06□□□□□ -0.64
GPNMB-211ENST00000479625 RTP3Q9BQQ7 232 aa11.06□□□□□ -0.64
GPNMB-211ENST00000479625 SDF4Q9BRK5 362 aa11.06□□□□□ -0.64
GPNMB-211ENST00000479625 ZBP1Q9H171 429 aa11.06□□□□□ -0.64
GPNMB-211ENST00000479625 PSTPIP2Q9H939 334 aa11.06□□□□□ -0.64
GPNMB-211ENST00000479625 DZANK1Q9NVP4 752 aa11.06□□□□□ -0.64
GPNMB-211ENST00000479625 NFASCO94856 1347 aa11.06□□□□□ -0.64
GPNMB-211ENST00000479625 IGKV6D-21A0A0A0MT36 114 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 KRBA1A5PL33 1030 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 BACH1O14867 736 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 HOXA2O43364 376 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 HBP1O60381 514 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 GPR32O75388 356 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 C22orf31O95567 290 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 CXCL14O95715 111 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 MAP1BP46821 2468 aaKnown RBP11.05□□□□□ -0.64
GPNMB-211ENST00000479625 CLCN3P51790 818 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 CRYBB1P53674 252 aaPredicted RBP11.05□□□□□ -0.64
GPNMB-211ENST00000479625 BCAR1P56945 870 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 PUM1Q14671 1186 aaKnown RBP eCLIP11.05□□□□□ -0.64
GPNMB-211ENST00000479625 SPECC1Q5M775 1068 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 ATAT1Q5SQI0 421 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 ODR4Q5SWX8 454 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 CCDC149Q6ZUS6 474 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 TRMT1LQ7Z2T5 733 aaKnown RBP11.05□□□□□ -0.64
GPNMB-211ENST00000479625 ECHDC2Q86YB7 292 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 RAB11FIP4Q86YS3 637 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 PLEKHM2Q8IWE5 1019 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 ZNF654Q8IZM8 581 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 VPS52Q8N1B4 723 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 SRBD1Q8N5C6 995 aaKnown RBP11.05□□□□□ -0.64
GPNMB-211ENST00000479625 CTCFLQ8NI51 663 aaPredicted RBP11.05□□□□□ -0.64
GPNMB-211ENST00000479625 SLC22A17Q8WUG5 538 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 BCL7CQ8WUZ0 217 aaPredicted RBP11.05□□□□□ -0.64
GPNMB-211ENST00000479625 RSAD2Q8WXG1 361 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 MXRA8Q9BRK3 442 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 KCNK12Q9HB15 430 aa11.05□□□□□ -0.64
GPNMB-211ENST00000479625 AGO4Q9HCK5 861 aaKnown RBP11.05□□□□□ -0.64
GPNMB-211ENST00000479625 USP24Q9UPU5 2620 aa11.04□□□□□ -0.64
GPNMB-211ENST00000479625 E7EWF7 191 aa11.04□□□□□ -0.64
GPNMB-211ENST00000479625 HIP1O00291 1037 aa11.04□□□□□ -0.64
GPNMB-211ENST00000479625 N4BP1O75113 896 aaKnown RBP11.04□□□□□ -0.64
GPNMB-211ENST00000479625 ZC3H11AO75152 810 aaKnown RBP eCLIP11.04□□□□□ -0.64
GPNMB-211ENST00000479625 ATG7O95352 703 aa11.04□□□□□ -0.64
GPNMB-211ENST00000479625 ATP4AP20648 1035 aa11.04□□□□□ -0.64
GPNMB-211ENST00000479625 FGFR4P22455 802 aa11.04□□□□□ -0.64
GPNMB-211ENST00000479625 PTH1RQ03431 593 aa11.04□□□□□ -0.64
GPNMB-211ENST00000479625 HDAC1Q13547 482 aaPredicted RBP11.04□□□□□ -0.64
GPNMB-211ENST00000479625 RALYLQ86SE5 291 aaKnown RBP11.04□□□□□ -0.64
GPNMB-211ENST00000479625 CABP7Q86V35 215 aa11.04□□□□□ -0.64
GPNMB-211ENST00000479625 METTL13Q8N6R0 699 aa11.04□□□□□ -0.64
GPNMB-211ENST00000479625 KCNV2Q8TDN2 545 aa11.04□□□□□ -0.64
GPNMB-211ENST00000479625 ACSF2Q96CM8 615 aaPredicted RBP11.04□□□□□ -0.64
GPNMB-211ENST00000479625 TMEM169Q96HH4 297 aa11.04□□□□□ -0.64
GPNMB-211ENST00000479625 LY9Q9HBG7 655 aa11.04□□□□□ -0.64
GPNMB-211ENST00000479625 DLL3Q9NYJ7 618 aa11.04□□□□□ -0.64
GPNMB-211ENST00000479625 CA14Q9ULX7 337 aa11.04□□□□□ -0.64
GPNMB-211ENST00000479625 ACACBO00763 2458 aa11.04□□□□□ -0.64
GPNMB-211ENST00000479625 CHD6Q8TD26 2715 aa11.03□□□□□ -0.64
GPNMB-211ENST00000479625 MAFGO15525 162 aa11.03□□□□□ -0.64
GPNMB-211ENST00000479625 DCNP07585 359 aaKnown RBP11.03□□□□□ -0.64
GPNMB-211ENST00000479625 CTSAP10619 480 aa11.03□□□□□ -0.64
GPNMB-211ENST00000479625 SLC26A2P50443 739 aa11.03□□□□□ -0.64
GPNMB-211ENST00000479625 NLRP11P59045 1033 aaKnown RBP11.03□□□□□ -0.64
GPNMB-211ENST00000479625 COL9A3Q14050 684 aaPredicted RBP11.03□□□□□ -0.64
GPNMB-211ENST00000479625 SART3Q15020 963 aaKnown RBP11.03□□□□□ -0.64
GPNMB-211ENST00000479625 RSPO4Q2I0M5 234 aaPredicted RBP11.03□□□□□ -0.64
GPNMB-211ENST00000479625 ZNF484Q5JVG2 852 aa11.03□□□□□ -0.64
GPNMB-211ENST00000479625 FAM160B1Q5W0V3 765 aa11.03□□□□□ -0.64
GPNMB-211ENST00000479625 PDXDC2PQ6P474 469 aa11.03□□□□□ -0.64
GPNMB-211ENST00000479625 ABHD15Q6UXT9 468 aa11.03□□□□□ -0.64
GPNMB-211ENST00000479625 OTOP3Q7RTS5 596 aa11.03□□□□□ -0.64
GPNMB-211ENST00000479625 HEATR3Q7Z4Q2 680 aa11.03□□□□□ -0.64
GPNMB-211ENST00000479625 GPR149Q86SP6 731 aa11.03□□□□□ -0.64
GPNMB-211ENST00000479625 LAPTM4BQ86VI4 370 aa11.03□□□□□ -0.64
GPNMB-211ENST00000479625 MB21D2Q8IYB1 491 aaPredicted RBP11.03□□□□□ -0.64
GPNMB-211ENST00000479625 LRRC71Q8N4P6 559 aa11.03□□□□□ -0.64
GPNMB-211ENST00000479625 CCDC82Q8N4S0 544 aa11.03□□□□□ -0.64
GPNMB-211ENST00000479625 NCOA7Q8NI08 942 aa11.03□□□□□ -0.64
GPNMB-211ENST00000479625 IGDCC4Q8TDY8 1250 aa11.03□□□□□ -0.64
GPNMB-211ENST00000479625 ZFRQ96KR1 1074 aaKnown RBP11.03□□□□□ -0.64
GPNMB-211ENST00000479625 VN1R3Q9BXE9 311 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms