RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 AMHP03971 560 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 XRCC6P12956 609 aaKnown RBP eCLIP7.66□□□□□ -1.18
BRCA1-215ENST00000478531 DARSP14868 501 aaKnown RBP7.66□□□□□ -1.18
BRCA1-215ENST00000478531 PLCG1P19174 1290 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 EIF4BP23588 611 aaKnown RBP7.66□□□□□ -1.18
BRCA1-215ENST00000478531 TXLNAP40222 546 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 PBX2P40425 430 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 ME1P48163 572 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 RAD51AP2Q09MP3 1159 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 USP49Q70CQ1 688 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 ZNF410Q86VK4 478 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 USP38Q8NB14 1042 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 RNF149Q8NC42 400 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 MCPH1Q8NEM0 835 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 ASAP3Q8TDY4 903 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 SLC9A7Q96T83 725 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 ZBED2Q9BTP6 218 aa7.66□□□□□ -1.18
BRCA1-215ENST00000478531 GCOM2Q9BZD3 368 aaPredicted RBP7.66□□□□□ -1.18
BRCA1-215ENST00000478531 UNC80Q8N2C7 3258 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 XIRP2A4UGR9 3374 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-215ENST00000478531 LRRIQ4A6NIV6 560 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 GPR182O15218 404 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 MGEA5O60502 916 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 MYOGP15173 224 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 SFPQP23246 707 aaKnown RBP eCLIP7.65□□□□□ -1.18
BRCA1-215ENST00000478531 DNAJB2P25686 324 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 SMAD3P84022 425 aaKnown RBP7.65□□□□□ -1.18
BRCA1-215ENST00000478531 CAPSQ13938 189 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 MXD4Q14582 209 aaPredicted RBP7.65□□□□□ -1.18
BRCA1-215ENST00000478531 TMEM119Q4V9L6 283 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 HYIQ5T013 277 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 CATSPER4Q7RTX7 472 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 HERC6Q8IVU3 1022 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 KCNG4Q8TDN1 519 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 LINC01599Q8WXQ3 324 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 FAM161BQ96MY7 647 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 RUSC1Q9BVN2 902 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 PBX4Q9BYU1 374 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 TMX1Q9H3N1 280 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 ERVK-5Q9HDB9 667 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 CFAP45Q9UL16 551 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 ATP6V1DQ9Y5K8 247 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 SQORQ9Y6N5 450 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 KIAA1671Q9BY89 1806 aa7.65□□□□□ -1.18
BRCA1-215ENST00000478531 TLL1O43897 1013 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 PPP6R2O75170 966 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 PLA2G4BP0C869 781 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 LIG1P18858 919 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 CYP11B2P19099 503 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 GLRA2P23416 452 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 PHKA2P46019 1235 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 KRT85P78386 507 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 CDC42EP1Q00587 391 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 TFDP1Q14186 410 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 ODR4Q5SWX8 454 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 Q7L0L9 218 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 ZNF710Q8N1W2 664 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 PDILTQ8N807 584 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 LRRC15Q8TF66 581 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 TIFAQ96CG3 184 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 ADAM2Q99965 735 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 FTHL17Q9BXU8 183 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 PANK2Q9BZ23 570 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 MINDY3Q9H8M7 445 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 IFT122Q9HBG6 1241 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 CCDC39Q9UFE4 941 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 MSRAQ9UJ68 235 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 PIN4Q9Y237 131 aaKnown RBP7.64□□□□□ -1.19
BRCA1-215ENST00000478531 FNDC1Q4ZHG4 1894 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-215ENST00000478531 NPHP3-ACAD11A0A0J9YXS1 232 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 INO80B-WBP1J3KQ70 363 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 ENPP3O14638 875 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 ASAP2O43150 1006 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 HIP1RO75146 1068 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 ERLIN2O94905 339 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 CA3P07451 260 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 ZSCAN20P17040 1043 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-215ENST00000478531 ARL2P36404 184 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 NUCB2P80303 420 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 MCM6Q14566 821 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 RAB30Q15771 203 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 ATL3Q6DD88 541 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 RINT1Q6NUQ1 792 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 GPBP1Q86WP2 473 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 RNF169Q8NCN4 708 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 PHOSPHO2Q8TCD6 241 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 BSNDQ8WZ55 320 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 RAD54LQ92698 747 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 IFT74Q96LB3 600 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 SPATA32Q96LK8 384 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 YME1L1Q96TA2 773 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 KIFC3Q9BVG8 833 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 INO80BQ9C086 356 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-215ENST00000478531 CCSER1Q9C0I3 900 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 TSPYL2Q9H2G4 693 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-215ENST00000478531 NKX2-4Q9H2Z4 354 aa7.64□□□□□ -1.19
BRCA1-215ENST00000478531 YBX2Q9Y2T7 364 aaKnown RBP7.64□□□□□ -1.19
BRCA1-215ENST00000478531 COL4A4P53420 1690 aaPredicted RBP7.64□□□□□ -1.19
BRCA1-215ENST00000478531 A0A0C4DFX4 3053 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms