RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 SKIP12755 728 aa14.61□□□□□ -0.07
ABCF3-212ENST00000478288 SFPQP23246 707 aaKnown RBP eCLIP14.61□□□□□ -0.07
ABCF3-212ENST00000478288 CCT2P78371 535 aaKnown RBP14.61□□□□□ -0.07
ABCF3-212ENST00000478288 ZXDAP98168 799 aa14.61□□□□□ -0.07
ABCF3-212ENST00000478288 NHLH1Q02575 133 aa14.61□□□□□ -0.07
ABCF3-212ENST00000478288 NPY5RQ15761 445 aa14.61□□□□□ -0.07
ABCF3-212ENST00000478288 PLPP4Q5VZY2 271 aa14.61□□□□□ -0.07
ABCF3-212ENST00000478288 ANKRD54Q6NXT1 300 aa14.61□□□□□ -0.07
ABCF3-212ENST00000478288 CPLX2Q6PUV4 134 aaKnown RBP14.61□□□□□ -0.07
ABCF3-212ENST00000478288 MIER3Q7Z3K6 550 aa14.61□□□□□ -0.07
ABCF3-212ENST00000478288 BLIDQ8IZY5 108 aa14.61□□□□□ -0.07
ABCF3-212ENST00000478288 SLC39A11Q8N1S5 342 aa14.61□□□□□ -0.07
ABCF3-212ENST00000478288 FBXL18Q96ME1 805 aa14.61□□□□□ -0.07
ABCF3-212ENST00000478288 SCLT1Q96NL6 688 aa14.61□□□□□ -0.07
ABCF3-212ENST00000478288 JPH2Q9BR39 696 aaPredicted RBP14.61□□□□□ -0.07
ABCF3-212ENST00000478288 INO80BQ9C086 356 aaPredicted RBP14.61□□□□□ -0.07
ABCF3-212ENST00000478288 PPME1Q9Y570 386 aa14.61□□□□□ -0.07
ABCF3-212ENST00000478288 TMEM221A6NGB7 291 aa14.6□□□□□ -0.07
ABCF3-212ENST00000478288 HIDE1A8MVS5 230 aa14.6□□□□□ -0.07
ABCF3-212ENST00000478288 M0R296 226 aa14.6□□□□□ -0.07
ABCF3-212ENST00000478288 CPLX1O14810 134 aa14.6□□□□□ -0.07
ABCF3-212ENST00000478288 TDP2O95551 362 aa14.6□□□□□ -0.07
ABCF3-212ENST00000478288 DNM2P50570 870 aa14.6□□□□□ -0.07
ABCF3-212ENST00000478288 RBM10P98175 930 aaKnown RBP14.6□□□□□ -0.07
ABCF3-212ENST00000478288 SMC1AQ14683 1233 aaKnown RBP14.6□□□□□ -0.07
ABCF3-212ENST00000478288 SYCE2Q6PIF2 218 aa14.6□□□□□ -0.07
ABCF3-212ENST00000478288 MRPL43Q8N983 215 aaKnown RBP14.6□□□□□ -0.07
ABCF3-212ENST00000478288 CASP10Q92851 521 aa14.6□□□□□ -0.07
ABCF3-212ENST00000478288 PRRX2Q99811 253 aa14.6□□□□□ -0.07
ABCF3-212ENST00000478288 SEPT9Q9UHD8 586 aaPredicted RBP14.6□□□□□ -0.07
ABCF3-212ENST00000478288 CYP46A1Q9Y6A2 500 aa14.6□□□□□ -0.07
ABCF3-212ENST00000478288 CFAP54Q96N23 3096 aa14.6□□□□□ -0.07
ABCF3-212ENST00000478288 RIF1Q5UIP0 2472 aaKnown RBP14.59□□□□□ -0.07
ABCF3-212ENST00000478288 C2orf71A6NGG8 1288 aa14.59□□□□□ -0.07
ABCF3-212ENST00000478288 MAFO75444 373 aaPredicted RBP14.59□□□□□ -0.07
ABCF3-212ENST00000478288 TECP42680 631 aa14.59□□□□□ -0.07
ABCF3-212ENST00000478288 PHKA2P46019 1235 aa14.59□□□□□ -0.07
ABCF3-212ENST00000478288 ALDH7A1P49419 539 aaKnown RBP14.59□□□□□ -0.07
ABCF3-212ENST00000478288 PSMC5P62195 406 aa14.59□□□□□ -0.07
ABCF3-212ENST00000478288 SIGLEC14Q08ET2 396 aa14.59□□□□□ -0.07
ABCF3-212ENST00000478288 PPP2R5CQ13362 524 aa14.59□□□□□ -0.07
ABCF3-212ENST00000478288 DRP2Q13474 957 aa14.59□□□□□ -0.07
ABCF3-212ENST00000478288 BMS1Q14692 1282 aaKnown RBP14.59□□□□□ -0.07
ABCF3-212ENST00000478288 NONOQ15233 471 aaKnown RBP eCLIP14.59□□□□□ -0.07
ABCF3-212ENST00000478288 MTERF2Q49AM1 385 aa14.59□□□□□ -0.07
ABCF3-212ENST00000478288 TPRNQ4KMQ1 711 aa14.59□□□□□ -0.07
ABCF3-212ENST00000478288 KRT25Q7Z3Z0 450 aa14.59□□□□□ -0.07
ABCF3-212ENST00000478288 TMC7Q7Z402 723 aa14.59□□□□□ -0.07
ABCF3-212ENST00000478288 EXOC8Q8IYI6 725 aa14.59□□□□□ -0.07
ABCF3-212ENST00000478288 HELQQ8TDG4 1101 aa14.59□□□□□ -0.07
ABCF3-212ENST00000478288 RPGRIP1Q96KN7 1286 aa14.59□□□□□ -0.07
ABCF3-212ENST00000478288 NECTIN4Q96NY8 510 aa14.59□□□□□ -0.07
ABCF3-212ENST00000478288 IRAK3Q9Y616 596 aa14.59□□□□□ -0.07
ABCF3-212ENST00000478288 VPS13AQ96RL7 3174 aa14.59□□□□□ -0.07
ABCF3-212ENST00000478288 DMDP11532 3685 aa14.58□□□□□ -0.08
ABCF3-212ENST00000478288 ARID2Q68CP9 1835 aa14.58□□□□□ -0.08
ABCF3-212ENST00000478288 A0A087WZ62 844 aa14.58□□□□□ -0.08
ABCF3-212ENST00000478288 DKC1O60832 514 aaKnown RBP eCLIP14.58□□□□□ -0.08
ABCF3-212ENST00000478288 ZNF623O75123 536 aa14.58□□□□□ -0.08
ABCF3-212ENST00000478288 CDKL5O76039 1030 aa14.58□□□□□ -0.08
ABCF3-212ENST00000478288 GCFC2P16383 781 aaKnown RBP14.58□□□□□ -0.08
ABCF3-212ENST00000478288 PBX3P40426 434 aa14.58□□□□□ -0.08
ABCF3-212ENST00000478288 RAB27AP51159 221 aa14.58□□□□□ -0.08
ABCF3-212ENST00000478288 POLGP54098 1239 aaPredicted RBP14.58□□□□□ -0.08
ABCF3-212ENST00000478288 BCAR1P56945 870 aa14.58□□□□□ -0.08
ABCF3-212ENST00000478288 ITIH3Q06033 890 aa14.58□□□□□ -0.08
ABCF3-212ENST00000478288 GIT2Q14161 759 aa14.58□□□□□ -0.08
ABCF3-212ENST00000478288 PTPN21Q16825 1174 aa14.58□□□□□ -0.08
ABCF3-212ENST00000478288 PPP4R3AQ6IN85 833 aa14.58□□□□□ -0.08
ABCF3-212ENST00000478288 ANO5Q75V66 913 aa14.58□□□□□ -0.08
ABCF3-212ENST00000478288 RNF169Q8NCN4 708 aa14.58□□□□□ -0.08
ABCF3-212ENST00000478288 GJA10Q969M2 543 aa14.58□□□□□ -0.08
ABCF3-212ENST00000478288 PBXIP1Q96AQ6 731 aa14.58□□□□□ -0.08
ABCF3-212ENST00000478288 TMEM169Q96HH4 297 aa14.58□□□□□ -0.08
ABCF3-212ENST00000478288 FAM20AQ96MK3 541 aa14.58□□□□□ -0.08
ABCF3-212ENST00000478288 FDXACB1Q9BRP7 624 aaPredicted RBP14.58□□□□□ -0.08
ABCF3-212ENST00000478288 STK39Q9UEW8 545 aa14.58□□□□□ -0.08
ABCF3-212ENST00000478288 DDX25Q9UHL0 483 aaKnown RBP14.58□□□□□ -0.08
ABCF3-212ENST00000478288 HCFC2Q9Y5Z7 792 aa14.58□□□□□ -0.08
ABCF3-212ENST00000478288 DENND4AQ7Z401 1863 aa14.57□□□□□ -0.08
ABCF3-212ENST00000478288 ZFHX2Q9C0A1 2572 aaPredicted RBP14.57□□□□□ -0.08
ABCF3-212ENST00000478288 FGFR4P22455 802 aa14.57□□□□□ -0.08
ABCF3-212ENST00000478288 QARSP47897 775 aaKnown RBP14.57□□□□□ -0.08
ABCF3-212ENST00000478288 GLB1LQ6UWU2 654 aa14.57□□□□□ -0.08
ABCF3-212ENST00000478288 ALYREFQ86V81 257 aaKnown RBP14.57□□□□□ -0.08
ABCF3-212ENST00000478288 SUGP1Q8IWZ8 645 aaKnown RBP14.57□□□□□ -0.08
ABCF3-212ENST00000478288 ZNF668Q96K58 619 aaPredicted RBP14.57□□□□□ -0.08
ABCF3-212ENST00000478288 ADAM7Q9H2U9 754 aa14.57□□□□□ -0.08
ABCF3-212ENST00000478288 KCNMB3Q9NPA1 279 aa14.57□□□□□ -0.08
ABCF3-212ENST00000478288 SUCLA2Q9P2R7 463 aaPredicted RBP14.57□□□□□ -0.08
ABCF3-212ENST00000478288 VAV3Q9UKW4 847 aa14.57□□□□□ -0.08
ABCF3-212ENST00000478288 NR2E1Q9Y466 385 aa14.57□□□□□ -0.08
ABCF3-212ENST00000478288 STK36Q9NRP7 1315 aa14.57□□□□□ -0.08
ABCF3-212ENST00000478288 TBX3O15119 743 aa14.56□□□□□ -0.08
ABCF3-212ENST00000478288 SLC37A4O43826 429 aa14.56□□□□□ -0.08
ABCF3-212ENST00000478288 GAS2O43903 313 aaKnown RBP14.56□□□□□ -0.08
ABCF3-212ENST00000478288 MRE11P49959 708 aa14.56□□□□□ -0.08
ABCF3-212ENST00000478288 PTPN5P54829 565 aa14.56□□□□□ -0.08
ABCF3-212ENST00000478288 TWF2Q6IBS0 349 aaKnown RBP14.56□□□□□ -0.08
ABCF3-212ENST00000478288 CES5AQ6NT32 575 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms