RNA–Protein interactions for RNA: ENST00000477836.1

SMARCB1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 2

Gene SMARCB1, Length 660 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-206ENST00000477836 CEP295Q9C0D2 2601 aa11.09□□□□□ -0.63
SMARCB1-206ENST00000477836 FAM170BA6NMN3 283 aa11.08□□□□□ -0.64
SMARCB1-206ENST00000477836 GDF9O60383 454 aa11.08□□□□□ -0.64
SMARCB1-206ENST00000477836 SSBP05455 408 aaKnown RBP eCLIP11.08□□□□□ -0.64
SMARCB1-206ENST00000477836 MYBP10242 640 aa11.08□□□□□ -0.64
SMARCB1-206ENST00000477836 ZSCAN20P17040 1043 aaPredicted RBP11.08□□□□□ -0.64
SMARCB1-206ENST00000477836 STAT5BP51692 787 aa11.08□□□□□ -0.64
SMARCB1-206ENST00000477836 CRYBB1P53674 252 aaPredicted RBP11.08□□□□□ -0.64
SMARCB1-206ENST00000477836 MCMDC2Q4G0Z9 681 aa11.08□□□□□ -0.64
SMARCB1-206ENST00000477836 CMASQ8NFW8 434 aaPredicted RBP11.08□□□□□ -0.64
SMARCB1-206ENST00000477836 NELL1Q92832 810 aa11.08□□□□□ -0.64
SMARCB1-206ENST00000477836 IGSF21Q96ID5 467 aa11.08□□□□□ -0.64
SMARCB1-206ENST00000477836 FAM227BQ96M60 508 aa11.08□□□□□ -0.64
SMARCB1-206ENST00000477836 MRPL9Q9BYD2 267 aaKnown RBP11.08□□□□□ -0.64
SMARCB1-206ENST00000477836 MAN1C1Q9NR34 630 aa11.08□□□□□ -0.64
SMARCB1-206ENST00000477836 GCN1Q92616 2671 aaKnown RBP11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 A0A0D9SFI3 127 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 C1QTNF9BB2RNN3 333 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 B4E1Z4 1266 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 ZNF213O14771 459 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 INPPL1O15357 1258 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 CDC45O75419 566 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 CNPP09543 421 aaKnown RBP11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 C1QTNF9P0C862 333 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 LAMP2P13473 410 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 ITGB5P18084 799 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 SDSP20132 328 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 CD72P21854 359 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 GPC5P78333 572 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 MTMR1Q13613 665 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 HTR4Q13639 388 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 SLC35G1Q2M3R5 365 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 C8orf34Q49A92 452 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 IL31Q6EBC2 164 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 LAIR1Q6GTX8 287 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 USP17L6PQ6QN14 398 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 PRR23CQ6ZRP0 262 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 GET4Q7L5D6 327 aaPredicted RBP11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 PLPPR4Q7Z2D5 763 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 ZNF589Q86UQ0 364 aaPredicted RBP11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 BCL7CQ8WUZ0 217 aaPredicted RBP11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 CUL5Q93034 780 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 JPH1Q9HDC5 661 aaPredicted RBP11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 SEMA4GQ9NTN9 838 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 SLC9A2Q9UBY0 812 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 DSPP15924 2871 aaKnown RBP11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 DMXL2Q8TDJ6 3036 aa11.07□□□□□ -0.64
SMARCB1-206ENST00000477836 EVPLQ92817 2033 aa11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 DOCK8Q8NF50 2099 aa11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 PNMA6FA0A0J9YX94 578 aa11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 PALM3A6NDB9 673 aaPredicted RBP11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 ANHXE9PGG2 379 aa11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 RFPL2O75678 378 aa11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 VTNP04004 478 aa11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 RETP07949 1114 aa11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 MAGEA9P43362 315 aa11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 PRKCQQ04759 706 aa11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 MLF2Q15773 248 aaPredicted RBP11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 IFIT1BQ5T764 474 aaKnown RBP11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 CASC1Q6TDU7 716 aa11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 PRR23BQ6ZRT6 265 aa11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 PIBF1Q8WXW3 757 aa11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 SMG7Q92540 1137 aaKnown RBP11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 RPP25Q9BUL9 199 aaKnown RBP11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 DDX23Q9BUQ8 820 aaKnown RBP11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 VN1R3Q9BXE9 311 aa11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 OSBPL6Q9BZF3 934 aa11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 RIOX1Q9H6W3 641 aa11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 ZSWIM5Q9P217 1185 aa11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 SMG1Q96Q15 3661 aaKnown RBP11.06□□□□□ -0.64
SMARCB1-206ENST00000477836 C2CD2LO14523 706 aa11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 CYTH3O43739 400 aa11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 LRP3O75074 770 aa11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 GPR32O75388 356 aa11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 GALTP07902 379 aa11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 NT5C2P49902 561 aa11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 ACTR2P61160 394 aa11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 CSRP2Q16527 193 aa11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 SLC44A4Q53GD3 710 aa11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 ZBTB41Q5SVQ8 909 aa11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 UNQ6494/PRO21346Q6UXR6 183 aa11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 CYP26C1Q6V0L0 522 aa11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 ZNF598Q86UK7 904 aaKnown RBP11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 CELF5Q8N6W0 485 aaKnown RBP11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 RILPL2Q969X0 211 aa11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 UBAC1Q9BSL1 405 aa11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 MYL10Q9BUA6 226 aa11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 FAM126AQ9BYI3 521 aaPredicted RBP11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 NRDE2Q9H7Z3 1164 aa11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 PIDD1Q9HB75 910 aa11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 LTB4R2Q9NPC1 389 aa11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 PRMT8Q9NR22 394 aaPredicted RBP11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 BAZ2BQ9UIF8 2168 aaKnown RBP11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 MYH15Q9Y2K3 1946 aa11.05□□□□□ -0.64
SMARCB1-206ENST00000477836 A0A0U1RQF3 1178 aa11.04□□□□□ -0.64
SMARCB1-206ENST00000477836 MEIS2O14770 477 aa11.04□□□□□ -0.64
SMARCB1-206ENST00000477836 HBP1O60381 514 aa11.04□□□□□ -0.64
SMARCB1-206ENST00000477836 ELMSAN1Q6PJG2 1045 aa11.04□□□□□ -0.64
SMARCB1-206ENST00000477836 LRSAM1Q6UWE0 723 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms