RNA–Protein interactions for RNA: ENST00000475319.1

ECHDC1-215, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 1,543 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-215ENST00000475319 EHBP1L1Q8N3D4 1523 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 RTL1A6NKG5 1358 aa6.54□□□□□ -1.36
ECHDC1-215ENST00000475319 ZNF335Q9H4Z2 1342 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 CEP170BQ9Y4F5 1589 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 ERBINQ96RT1 1412 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 GPR75-ASB3A0A0A6YYF3 556 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 HTR3EA5X5Y0 456 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 ADCY3O60266 1144 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 PFDN1O60925 122 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 B3GALNT1O75752 331 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 GFPT2O94808 682 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 LDHAP00338 332 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 HNRNPCP07910 306 aaKnown RBP eCLIP6.53□□□□□ -1.363e-6■□□□□ 11
ECHDC1-215ENST00000475319 ACRP10323 421 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 ESRRAP11474 423 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 SELPP16109 830 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 PRKAR2BP31323 418 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 STAT3P40763 770 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 CD97P48960 835 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 CTCFP49711 727 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 PEX5P50542 639 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 MRPS35P82673 323 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 PDE1BQ01064 536 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 AKAP17AQ02040 695 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 STIM1Q13586 685 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 CBX2Q14781 532 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 BEND6Q5SZJ8 279 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 TMEM53Q6P2H8 277 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 CYB5D1Q6P9G0 228 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 BRSK2Q8IWQ3 736 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 RAVER1Q8IY67 606 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 LSMEM2Q8N112 164 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 RASSF8Q8NHQ8 419 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 ATRIPQ8WXE1 791 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 P3H4Q92791 437 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 NAP1L4Q99733 375 aaKnown RBP6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 RTFDC1Q9BY42 306 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 PDGFDQ9GZP0 370 aaPredicted RBP6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 PDE11AQ9HCR9 933 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 SLC40A1Q9NP59 571 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 FKBP14Q9NWM8 211 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 STK39Q9UEW8 545 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 TPCN1Q9ULQ1 816 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 PCDHB10Q9UN67 800 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 ASB3Q9Y575 518 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 TIMM22Q9Y584 194 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 CORINQ9Y5Q5 1042 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 EID1Q9Y6B2 187 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 SLC4A7Q9Y6M7 1214 aa6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.53□□□□□ -1.36
ECHDC1-215ENST00000475319 LTBP3Q9NS15 1303 aa6.52□□□□□ -1.36
ECHDC1-215ENST00000475319 A0A087X0B3 334 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 BUB1BO60566 1050 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 TSPAN1O60635 241 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 CCDC192P0DO97 292 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 GNAT2P19087 354 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 FGFR3P22607 806 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 KIF5BP33176 963 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 AARSP49588 968 aaKnown RBP eCLIP6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 GUCY2FP51841 1108 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 TBX4P57082 545 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 EVCP57679 992 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 GSDMDP57764 484 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 BASP1P80723 227 aaKnown RBP6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 EXOSC10Q01780 885 aaKnown RBP6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 ITGA7Q13683 1181 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 SEPT2Q15019 361 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 BCL2A1Q16548 175 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 SLC10A6Q3KNW5 377 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 NEPROQ6NW34 567 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 UNC5AQ6ZN44 842 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 CEP128Q6ZU80 1094 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 ZNF365Q70YC5 407 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 SRGAP1Q7Z6B7 1085 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 ZNF554Q86TJ5 538 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 DDX42Q86XP3 938 aaKnown RBP eCLIP6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 ITPRIPQ8IWB1 547 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 CCDC146Q8IYE0 955 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 ARHGAP18Q8N392 663 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 KIAA1958Q8N8K9 716 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 ZBTB38Q8NAP3 1195 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 GSDMBQ8TAX9 411 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 DIS3LQ8TF46 1054 aaKnown RBP6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 ANKRD49Q8WVL7 239 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 IFT81Q8WYA0 676 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 FUCA2Q9BTY2 467 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 PUS3Q9BZE2 481 aaKnown RBP6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 UBE2OQ9C0C9 1292 aaKnown RBP6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 LACRTQ9GZZ8 138 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 FAM204AQ9H8W3 233 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 PARVBQ9HBI1 364 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 PREBQ9HCU5 417 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 ANO10Q9NW15 660 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 SUCLA2Q9P2R7 463 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 IP6K2Q9UHH9 426 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 TTC7AQ9ULT0 858 aaPredicted RBP6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 PCDHB2Q9Y5E7 798 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 LTBP4Q8N2S1 1624 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 CCDC141Q6ZP82 1450 aa6.52□□□□□ -1.37
ECHDC1-215ENST00000475319 PRR36Q9H6K5 1346 aa6.52□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms