RNA–Protein interactions for RNA: ENST00000474309.1

EXOSC1-207, Transcript of exosome component 1, humanhuman

TSL 5

Gene EXOSC1, Length 260 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-207ENST00000474309 LRRC71Q8N4P6 559 aa13□□□□□ -0.33
EXOSC1-207ENST00000474309 RDM1Q8NG50 284 aa13□□□□□ -0.33
EXOSC1-207ENST00000474309 HELQQ8TDG4 1101 aa13□□□□□ -0.33
EXOSC1-207ENST00000474309 TMEM169Q96HH4 297 aa13□□□□□ -0.33
EXOSC1-207ENST00000474309 NIFKQ9BYG3 293 aaKnown RBP13□□□□□ -0.33
EXOSC1-207ENST00000474309 GCOM2Q9BZD3 368 aaPredicted RBP13□□□□□ -0.33
EXOSC1-207ENST00000474309 DZANK1Q9NVP4 752 aa13□□□□□ -0.33
EXOSC1-207ENST00000474309 USP34Q70CQ2 3546 aa13□□□□□ -0.33
EXOSC1-207ENST00000474309 IGKV6-21A0A0C4DH24 114 aa12.99□□□□□ -0.33
EXOSC1-207ENST00000474309 H0Y858 1186 aa12.99□□□□□ -0.33
EXOSC1-207ENST00000474309 ADAMTS3O15072 1205 aa12.99□□□□□ -0.33
EXOSC1-207ENST00000474309 MSH4O15457 936 aa12.99□□□□□ -0.33
EXOSC1-207ENST00000474309 EDIL3O43854 480 aa12.99□□□□□ -0.33
EXOSC1-207ENST00000474309 ZNF623O75123 536 aa12.99□□□□□ -0.33
EXOSC1-207ENST00000474309 BRD1O95696 1058 aa12.99□□□□□ -0.33
EXOSC1-207ENST00000474309 PDGFBP01127 241 aaPredicted RBP12.99□□□□□ -0.33
EXOSC1-207ENST00000474309 CTSAP10619 480 aa12.99□□□□□ -0.33
EXOSC1-207ENST00000474309 PHKA2P46019 1235 aa12.99□□□□□ -0.33
EXOSC1-207ENST00000474309 DNM2P50570 870 aa12.99□□□□□ -0.33
EXOSC1-207ENST00000474309 PRKCEQ02156 737 aa12.99□□□□□ -0.33
EXOSC1-207ENST00000474309 KIAA1841Q6NSI8 718 aa12.99□□□□□ -0.33
EXOSC1-207ENST00000474309 VPS52Q8N1B4 723 aa12.99□□□□□ -0.33
EXOSC1-207ENST00000474309 RNF169Q8NCN4 708 aa12.99□□□□□ -0.33
EXOSC1-207ENST00000474309 NLRP7Q8WX94 980 aa12.99□□□□□ -0.33
EXOSC1-207ENST00000474309 KCNB2Q92953 911 aa12.99□□□□□ -0.33
EXOSC1-207ENST00000474309 ZBP1Q9H171 429 aa12.99□□□□□ -0.33
EXOSC1-207ENST00000474309 TSHZ2Q9NRE2 1034 aa12.99□□□□□ -0.33
EXOSC1-207ENST00000474309 FAM86C1Q9NVL1 165 aa12.99□□□□□ -0.33
EXOSC1-207ENST00000474309 STK39Q9UEW8 545 aa12.99□□□□□ -0.33
EXOSC1-207ENST00000474309 NT5C1B-RDH14C9J2C7 533 aa12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 GAS7O60861 476 aa12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 SP100P23497 879 aaPredicted RBP12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 CLCN5P51795 746 aa12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 FGD1P98174 961 aa12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 FOXK2Q01167 660 aa12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 AKAP17AQ02040 695 aaKnown RBP12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 XKR3Q5GH77 459 aa12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 ASTLQ6HA08 431 aaPredicted RBP12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 ZNF410Q86VK4 478 aa12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 PPFIBP1Q86W92 1011 aa12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 TMEM87AQ8NBN3 555 aa12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 CCDC148Q8NFR7 591 aa12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 SLC22A17Q8WUG5 538 aa12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 SLC5A5Q92911 643 aa12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 IGSF21Q96ID5 467 aa12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 CCDC136Q96JN2 1154 aa12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 ZNF668Q96K58 619 aaPredicted RBP12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 SCLT1Q96NL6 688 aa12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 CEP89Q96ST8 783 aa12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 TEKT3Q9BXF9 490 aa12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 RNF26Q9BY78 433 aaPredicted RBP12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 C22orf23Q9BZE7 217 aa12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 SH3GLB2Q9NR46 395 aa12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 NAP1L2Q9ULW6 460 aaPredicted RBP12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 SPTBN4Q9H254 2564 aa12.98□□□□□ -0.33
EXOSC1-207ENST00000474309 NID2Q14112 1375 aa12.97□□□□□ -0.33
EXOSC1-207ENST00000474309 PSMD10O75832 226 aa12.97□□□□□ -0.33
EXOSC1-207ENST00000474309 GALTP07902 379 aa12.97□□□□□ -0.33
EXOSC1-207ENST00000474309 FGFR4P22455 802 aa12.97□□□□□ -0.33
EXOSC1-207ENST00000474309 SFPQP23246 707 aaKnown RBP eCLIP12.97□□□□□ -0.33
EXOSC1-207ENST00000474309 NBL1P41271 181 aa12.97□□□□□ -0.33
EXOSC1-207ENST00000474309 NTRK3Q16288 839 aa12.97□□□□□ -0.33
EXOSC1-207ENST00000474309 Q4G0T1 1027 aa12.97□□□□□ -0.33
EXOSC1-207ENST00000474309 RARS2Q5T160 578 aaKnown RBP12.97□□□□□ -0.33
EXOSC1-207ENST00000474309 B3GNT9Q6UX72 402 aa12.97□□□□□ -0.33
EXOSC1-207ENST00000474309 TDRD5Q8NAT2 981 aaKnown RBP12.97□□□□□ -0.33
EXOSC1-207ENST00000474309 AGXT2Q9BYV1 514 aa12.97□□□□□ -0.33
EXOSC1-207ENST00000474309 NRDE2Q9H7Z3 1164 aa12.97□□□□□ -0.33
EXOSC1-207ENST00000474309 CYP26B1Q9NR63 512 aa12.97□□□□□ -0.33
EXOSC1-207ENST00000474309 LIMD1Q9UGP4 676 aa12.97□□□□□ -0.33
EXOSC1-207ENST00000474309 CDH22Q9UJ99 828 aa12.97□□□□□ -0.33
EXOSC1-207ENST00000474309 DBR1Q9UK59 544 aaKnown RBP12.97□□□□□ -0.33
EXOSC1-207ENST00000474309 PLXNA3P51805 1871 aa12.97□□□□□ -0.33
EXOSC1-207ENST00000474309 CFAP54Q96N23 3096 aa12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 CYP3A7-CYP3A51PA0A087WV96 503 aa12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 A0A087WZ62 844 aa12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 ZC3H11AO75152 810 aaKnown RBP eCLIP12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 OFD1O75665 1012 aa12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 STBD1O95210 358 aa12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 IFNAR1P17181 557 aa12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 CYP3A7P24462 503 aa12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 RAB27AP51159 221 aa12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 UGCGQ16739 394 aa12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 NOMO2Q5JPE7 1267 aa12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 LRCH2Q5VUJ6 765 aa12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 GLB1LQ6UWU2 654 aa12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 Q6ZUG5 572 aa12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 MIER3Q7Z3K6 550 aa12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 C12orf76Q8N812 135 aaPredicted RBP12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 TMEM105Q8N8V8 129 aa12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 BRF1Q92994 677 aa12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 ACSF2Q96CM8 615 aaPredicted RBP12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 PGBD4Q96DM1 585 aa12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 JPH2Q9BR39 696 aaPredicted RBP12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 FDXACB1Q9BRP7 624 aaPredicted RBP12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 UNC45AQ9H3U1 944 aa12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 TBC1D13Q9NVG8 400 aa12.96□□□□□ -0.33
EXOSC1-207ENST00000474309 MAFO75444 373 aaPredicted RBP12.95□□□□□ -0.34
EXOSC1-207ENST00000474309 CSDE1O75534 798 aaKnown RBP12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms