RNA–Protein interactions for RNA: ENST00000470687.1

UBXN4-206, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-206ENST00000470687 CSF2RBP32927 897 aa3.71□□□□□ -1.82
UBXN4-206ENST00000470687 GPR19Q15760 415 aa3.71□□□□□ -1.82
UBXN4-206ENST00000470687 CHRNA2Q15822 529 aa3.71□□□□□ -1.82
UBXN4-206ENST00000470687 MTDHQ86UE4 582 aaKnown RBP3.71□□□□□ -1.82
UBXN4-206ENST00000470687 TAX1BP1Q86VP1 789 aa3.71□□□□□ -1.82
UBXN4-206ENST00000470687 DDX42Q86XP3 938 aaKnown RBP eCLIP3.71□□□□□ -1.82
UBXN4-206ENST00000470687 FUKQ8N0W3 1084 aa3.71□□□□□ -1.82
UBXN4-206ENST00000470687 CBARPQ8N350 705 aaPredicted RBP3.71□□□□□ -1.82
UBXN4-206ENST00000470687 CACTINQ8WUQ7 758 aaKnown RBP3.71□□□□□ -1.82
UBXN4-206ENST00000470687 AJUBAQ96IF1 538 aa3.71□□□□□ -1.82
UBXN4-206ENST00000470687 SMOC1Q9H4F8 434 aa3.71□□□□□ -1.82
UBXN4-206ENST00000470687 EPB41L1Q9H4G0 881 aa3.71□□□□□ -1.82
UBXN4-206ENST00000470687 MYOTQ9UBF9 498 aa3.71□□□□□ -1.82
UBXN4-206ENST00000470687 CFDP1Q9UEE9 299 aaPredicted RBP3.71□□□□□ -1.82
UBXN4-206ENST00000470687 PLAAQ9Y263 795 aa3.71□□□□□ -1.82
UBXN4-206ENST00000470687 LMTK3Q96Q04 1460 aa3.71□□□□□ -1.82
UBXN4-206ENST00000470687 PTPRTO14522 1441 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 NPATQ14207 1427 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 ARHGEF40Q8TER5 1519 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 KIF14Q15058 1648 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 OPA1O60313 960 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 TSPY4P0CV99 314 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 TSPY10P0CW01 314 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 HSP90B1P14625 803 aaKnown RBP3.7□□□□□ -1.82
UBXN4-206ENST00000470687 FAHP16930 419 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 PTPN1P18031 435 aaKnown RBP3.7□□□□□ -1.82
UBXN4-206ENST00000470687 ACO1P21399 889 aaKnown RBP3.7□□□□□ -1.82
UBXN4-206ENST00000470687 GTF2A2P52657 109 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 SMAD3P84022 425 aaKnown RBP3.7□□□□□ -1.82
UBXN4-206ENST00000470687 PDCD1Q15116 288 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 SMAD2Q15796 467 aaKnown RBP3.7□□□□□ -1.82
UBXN4-206ENST00000470687 PCSK4Q6UW60 755 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 Q6ZSN1 163 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 KCTD1Q719H9 257 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 GPR155Q7Z3F1 870 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 C1orf210Q8IVY1 113 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 RAVER1Q8IY67 606 aaKnown RBP3.7□□□□□ -1.82
UBXN4-206ENST00000470687 IFNL2Q8IZJ0 200 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 CHST14Q8NCH0 376 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 NEIL1Q96FI4 390 aaPredicted RBP3.7□□□□□ -1.82
UBXN4-206ENST00000470687 NAF1Q96HR8 494 aaKnown RBP3.7□□□□□ -1.82
UBXN4-206ENST00000470687 CHAMP1Q96JM3 812 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 C16orf92Q96LL3 132 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 AGAP2Q99490 1192 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 ELF4Q99607 663 aaPredicted RBP3.7□□□□□ -1.82
UBXN4-206ENST00000470687 OXSMQ9NWU1 459 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 DSEQ9UL01 958 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 TMPRSS11EQ9UL52 423 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 COA3Q9Y2R0 106 aaPredicted RBP3.7□□□□□ -1.82
UBXN4-206ENST00000470687 IQSEC2Q5JU85 1478 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 ARHGAP35Q9NRY4 1499 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 MYO5CQ9NQX4 1742 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 ARHGAP5Q13017 1502 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 ARHGEF12Q9NZN5 1544 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 RTEL1-TNFRSF6BF6WH68 1400 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 UHRF1BP1Q6BDS2 1440 aa3.7□□□□□ -1.82
UBXN4-206ENST00000470687 SPAG9O60271 1321 aaKnown RBP3.7□□□□□ -1.82
UBXN4-206ENST00000470687 KDM5CP41229 1560 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 TTC37Q6PGP7 1564 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 ZMYM3Q14202 1370 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 PTPDC1A2A3K4 754 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 ELL2O00472 640 aaPredicted RBP3.69□□□□□ -1.82
UBXN4-206ENST00000470687 CLASP2O75122 1294 aaKnown RBP3.69□□□□□ -1.82
UBXN4-206ENST00000470687 RAD17O75943 681 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 KNG1P01042 644 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 CHGBP05060 677 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 KRT15P19012 456 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 SLC9A1P19634 815 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 INAVAQ3KP66 663 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 PAN2Q504Q3 1202 aaKnown RBP3.69□□□□□ -1.82
UBXN4-206ENST00000470687 FNDC7Q5VTL7 733 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 LRCH2Q5VUJ6 765 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 DPY19L2P1Q6NXN4 242 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 LRSAM1Q6UWE0 723 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 UNQ6494/PRO21346Q6UXR6 183 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 FILIP1Q7Z7B0 1213 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 SLC41A1Q8IVJ1 513 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 ZC3H7AQ8IWR0 971 aaKnown RBP3.69□□□□□ -1.82
UBXN4-206ENST00000470687 DTX3Q8N9I9 347 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 TTLL11Q8NHH1 800 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 IL17DQ8TAD2 202 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 COG1Q8WTW3 980 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 LARP4BQ92615 738 aaKnown RBP3.69□□□□□ -1.82
UBXN4-206ENST00000470687 PLEKHG4BQ96PX9 1271 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 EMC7Q9NPA0 242 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 PCDH12Q9NPG4 1184 aa3.69□□□□□ -1.82
UBXN4-206ENST00000470687 FRMPD1Q5SYB0 1578 aa3.68□□□□□ -1.82
UBXN4-206ENST00000470687 FYCO1Q9BQS8 1478 aa3.68□□□□□ -1.82
UBXN4-206ENST00000470687 CCNB3Q8WWL7 1395 aa3.68□□□□□ -1.82
UBXN4-206ENST00000470687 SCDO00767 359 aa3.68□□□□□ -1.82
UBXN4-206ENST00000470687 ADH4P08319 380 aa3.68□□□□□ -1.82
UBXN4-206ENST00000470687 MMEP08473 750 aa3.68□□□□□ -1.82
UBXN4-206ENST00000470687 GNAT1P11488 350 aa3.68□□□□□ -1.82
UBXN4-206ENST00000470687 NCLP19338 710 aaKnown RBP3.68□□□□□ -1.82
UBXN4-206ENST00000470687 LMO1P25800 156 aa3.68□□□□□ -1.82
UBXN4-206ENST00000470687 ERVK-21P61565 698 aa3.68□□□□□ -1.82
UBXN4-206ENST00000470687 CFAP100Q494V2 611 aa3.68□□□□□ -1.82
UBXN4-206ENST00000470687 CD276Q5ZPR3 534 aa3.68□□□□□ -1.82
UBXN4-206ENST00000470687 POLNQ7Z5Q5 900 aa3.68□□□□□ -1.82
UBXN4-206ENST00000470687 MRGPRGQ86SM5 289 aa3.68□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms