RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 MRVI1Q9Y6F6 885 aa5.37□□□□□ -1.55
SF3B1-208ENST00000470268 THSD7BQ9C0I4 1608 aa5.37□□□□□ -1.55
SF3B1-208ENST00000470268 CENPFP49454 3210 aa5.37□□□□□ -1.55
SF3B1-208ENST00000470268 DNAJC25-GNG10A0A024R161 153 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 CCDC194A0A1B0GVG4 234 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 COBLO75128 1261 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 USP17L7P0C7H9 530 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 NID1P14543 1247 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 ATP2B1P20020 1258 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 NRG1Q02297 640 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-208ENST00000470268 AP3B2Q13367 1082 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 GNL2Q13823 731 aaKnown RBP5.36□□□□□ -1.55
SF3B1-208ENST00000470268 LRP8Q14114 963 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 ADGRE1Q14246 886 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 NONOQ15233 471 aaKnown RBP eCLIP5.36□□□□□ -1.55
SF3B1-208ENST00000470268 WDR78Q5VTH9 848 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 GPR142Q7Z601 462 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 MCF2L2Q86YR7 1114 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 KRTAP1-3Q8IUG1 177 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 ANKRD35Q8N283 1001 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 FAM133AQ8N9E0 248 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 TMEM102Q8N9M5 508 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-208ENST00000470268 C3orf58Q8NDZ4 430 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 CYP2W1Q8TAV3 490 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 BICD2Q8TD16 824 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 UBE2OQ9C0C9 1292 aaKnown RBP5.36□□□□□ -1.55
SF3B1-208ENST00000470268 BHLHE41Q9C0J9 482 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-208ENST00000470268 RBSNQ9H1K0 784 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 MROH8Q9H579 483 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 ZFYVE1Q9HBF4 777 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 BRMS1Q9HCU9 246 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 ABCB6Q9NP58 842 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 FBXO40Q9UH90 709 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 CNPY2Q9Y2B0 182 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 CLIC4Q9Y696 253 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 HTTP42858 3142 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 FRMPD4Q14CM0 1322 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 RPTORQ8N122 1335 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 TMEM238LA0A1B0GVL6 79 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 FAM86B1E9PN63 330 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 SLC37A4O43826 429 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 BAG4O95429 457 aaKnown RBP5.36□□□□□ -1.55
SF3B1-208ENST00000470268 TDP2O95551 362 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 FOSP01100 380 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-208ENST00000470268 ALBP02768 609 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 FAM86B2P0C5J1 330 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 EIF2AK2P19525 551 aaKnown RBP5.36□□□□□ -1.55
SF3B1-208ENST00000470268 ADORA2AP29274 412 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 ZNF76P36508 570 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 SREBF1P36956 1147 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 ADH7P40394 386 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 CCNA1P78396 465 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 MRPS9P82933 396 aaKnown RBP5.36□□□□□ -1.55
SF3B1-208ENST00000470268 LACTBP83111 547 aaPredicted RBP5.36□□□□□ -1.55
SF3B1-208ENST00000470268 CEBPZQ03701 1054 aaKnown RBP5.36□□□□□ -1.55
SF3B1-208ENST00000470268 GRB14Q14449 540 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 PTPAQ15257 358 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 SF3A1Q15459 793 aaKnown RBP5.36□□□□□ -1.55
SF3B1-208ENST00000470268 LETM2Q2VYF4 491 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 RNF34Q969K3 372 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 NXPE3Q969Y0 559 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 LENG9Q96B70 501 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 RMDN3Q96TC7 470 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 MMP19Q99542 508 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 PDCD2LQ9BRP1 358 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 GLT8D2Q9H1C3 349 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 PXMP2Q9NR77 195 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 MAP3K20Q9NYL2 800 aaKnown RBP5.36□□□□□ -1.55
SF3B1-208ENST00000470268 GJD2Q9UKL4 321 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 PPM1HQ9ULR3 514 aa5.36□□□□□ -1.55
SF3B1-208ENST00000470268 MYH6P13533 1939 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 BRCA2P51587 3418 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 IGLV3-22A0A075B6J6 115 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 J3QW42 95 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 GHRHP01286 108 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 CYP3A4P08684 503 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 FCER1AP12319 257 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 ITGB5P18084 799 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 MAPK4P31152 587 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 MCM7P33993 719 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 COPB2P35606 906 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 NASPP49321 788 aaPredicted RBP5.35□□□□□ -1.55
SF3B1-208ENST00000470268 RAC1P63000 192 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 GRIN1Q05586 938 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 KCTD2Q14681 263 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 PGM5Q15124 567 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 ZNF174Q15697 407 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 RILPL1Q5EBL4 403 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 TTC38Q5R3I4 469 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 ANO1Q5XXA6 986 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 C20orf204Q6ZNR8 217 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 CLEC17AQ6ZS10 378 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 PLEKHH3Q7Z736 793 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 NEK8Q86SG6 692 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 TEX2Q8IWB9 1127 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 SAMD3Q8N6K7 520 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 C4orf32Q8N8J7 132 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 LINC00301Q8NCQ3 95 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 NPLOC4Q8TAT6 608 aa5.35□□□□□ -1.55
SF3B1-208ENST00000470268 USP6NLQ92738 828 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms