RNA–Protein interactions for RNA: ENST00000469511.1

PTPN4-209, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 3

Gene PTPN4, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-209ENST00000469511 DHX16O60231 1041 aaKnown RBP6.11□□□□□ -1.43
PTPN4-209ENST00000469511 CLASP2O75122 1294 aaKnown RBP6.11□□□□□ -1.43
PTPN4-209ENST00000469511 LRRN2O75325 713 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 LMNAP02545 664 aaKnown RBP6.11□□□□□ -1.43
PTPN4-209ENST00000469511 TGFB3P10600 412 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 SCG2P13521 617 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 ATXN1P54253 815 aaKnown RBP6.11□□□□□ -1.43
PTPN4-209ENST00000469511 MRPS6P82932 125 aaKnown RBP6.11□□□□□ -1.43
PTPN4-209ENST00000469511 GHRHRQ02643 423 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 DPYDQ12882 1025 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 COL9A2Q14055 689 aaPredicted RBP6.11□□□□□ -1.43
PTPN4-209ENST00000469511 ALX1Q15699 326 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 GRIK4Q16099 956 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 SWI5Q1ZZU3 235 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 GPATCH4Q5T3I0 446 aaKnown RBP6.11□□□□□ -1.43
PTPN4-209ENST00000469511 PPP1R26Q5T8A7 1209 aaPredicted RBP6.11□□□□□ -1.43
PTPN4-209ENST00000469511 METTL7BQ6UX53 244 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 THNSL1Q8IYQ7 743 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 SUMF1Q8NBK3 374 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 SNIP1Q8TAD8 396 aaKnown RBP6.11□□□□□ -1.43
PTPN4-209ENST00000469511 TMEM40Q8WWA1 233 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 RSAD2Q8WXG1 361 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 AUTS2Q8WXX7 1259 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 TTC14Q96N46 770 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 PPP1R16BQ96T49 567 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 TCF25Q9BQ70 676 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 ADAM7Q9H2U9 754 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 TMPRSS4Q9NRS4 437 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 RNF19AQ9NV58 838 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 PNMA2Q9UL42 364 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 FASNP49327 2511 aaKnown RBP6.11□□□□□ -1.43
PTPN4-209ENST00000469511 CFAP47Q6ZTR5 3102 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 MYH15Q9Y2K3 1946 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 PATJQ8NI35 1801 aa6.11□□□□□ -1.43
PTPN4-209ENST00000469511 SDK1Q7Z5N4 2213 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 NRCAMQ92823 1304 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 MYH9P35579 1960 aaKnown RBP6.1□□□□□ -1.43
PTPN4-209ENST00000469511 DCDC2BA2VCK2 349 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 CARNS1A5YM72 827 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 C2orf71A6NGG8 1288 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 C9IYK1 514 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 NT5C1B-RDH14C9J2C7 533 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 M0R2N6 131 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 GDF9O60383 454 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 LILRA1O75019 489 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 N4BP1O75113 896 aaKnown RBP6.1□□□□□ -1.43
PTPN4-209ENST00000469511 DCNP07585 359 aaKnown RBP6.1□□□□□ -1.43
PTPN4-209ENST00000469511 GNAT1P11488 350 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 INSRRP14616 1297 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 GLULP15104 373 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 EPCAMP16422 314 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 CCND2P30279 289 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 TCF7P36402 384 aaPredicted RBP6.1□□□□□ -1.43
PTPN4-209ENST00000469511 SEC13P55735 322 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 NFX1Q12986 1120 aaKnown RBP6.1□□□□□ -1.43
PTPN4-209ENST00000469511 PPFIA1Q13136 1202 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 ST3GAL2Q16842 350 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 SPECC1Q5M775 1068 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 KCNV1Q6PIU1 500 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 MAML2Q8IZL2 1156 aaPredicted RBP6.1□□□□□ -1.43
PTPN4-209ENST00000469511 ZDHHC14Q8IZN3 488 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 RASGRP4Q8TDF6 673 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 MRPS27Q92552 414 aaKnown RBP6.1□□□□□ -1.43
PTPN4-209ENST00000469511 MTMR8Q96EF0 704 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 INPP4AQ96PE3 977 aaPredicted RBP6.1□□□□□ -1.43
PTPN4-209ENST00000469511 PIGSQ96S52 555 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 CDCA3Q99618 268 aaPredicted RBP6.1□□□□□ -1.43
PTPN4-209ENST00000469511 AMNQ9BXJ7 453 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 OSBPL3Q9H4L5 887 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 DCTPP1Q9H773 170 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 SENP2Q9HC62 589 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 ENTPD7Q9NQZ7 604 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 TUBE1Q9UJT0 475 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 LRFN2Q9ULH4 789 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 DDX19BQ9UMR2 479 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 NOC2LQ9Y3T9 749 aaKnown RBP6.1□□□□□ -1.43
PTPN4-209ENST00000469511 NR2E1Q9Y466 385 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 PCDHB12Q9Y5F1 795 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 PCDHA1Q9Y5I3 950 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 TRPV2Q9Y5S1 764 aa6.1□□□□□ -1.43
PTPN4-209ENST00000469511 MTCL1Q9Y4B5 1905 aaKnown RBP6.09□□□□□ -1.43
PTPN4-209ENST00000469511 SALL3Q9BXA9 1300 aa6.09□□□□□ -1.43
PTPN4-209ENST00000469511 IGSF9BQ9UPX0 1349 aa6.09□□□□□ -1.43
PTPN4-209ENST00000469511 FRYLO94915 3013 aa6.09□□□□□ -1.43
PTPN4-209ENST00000469511 B4E1Z4 1266 aa6.09□□□□□ -1.43
PTPN4-209ENST00000469511 CYTH3O43739 400 aa6.09□□□□□ -1.43
PTPN4-209ENST00000469511 SP9P0CG40 484 aa6.09□□□□□ -1.43
PTPN4-209ENST00000469511 STAG3L1P0CL83 205 aa6.09□□□□□ -1.43
PTPN4-209ENST00000469511 MYBP10242 640 aa6.09□□□□□ -1.43
PTPN4-209ENST00000469511 KCNA2P16389 499 aa6.09□□□□□ -1.43
PTPN4-209ENST00000469511 HOXB8P17481 243 aaPredicted RBP6.09□□□□□ -1.43
PTPN4-209ENST00000469511 SARSP49591 514 aaKnown RBP6.09□□□□□ -1.43
PTPN4-209ENST00000469511 PRR20EP86478 221 aa6.09□□□□□ -1.43
PTPN4-209ENST00000469511 PRR20CP86479 221 aa6.09□□□□□ -1.43
PTPN4-209ENST00000469511 PRR20DP86480 221 aa6.09□□□□□ -1.43
PTPN4-209ENST00000469511 PRR20BP86481 221 aa6.09□□□□□ -1.43
PTPN4-209ENST00000469511 PRR20AP86496 221 aa6.09□□□□□ -1.43
PTPN4-209ENST00000469511 UBE3AQ05086 875 aa6.09□□□□□ -1.43
PTPN4-209ENST00000469511 KCNA1Q09470 495 aa6.09□□□□□ -1.43
PTPN4-209ENST00000469511 FOXC1Q12948 553 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms