RNA–Protein interactions for RNA: ENST00000467041.1

SSR2-204, Transcript of signal sequence receptor subunit 2, humanhuman

TSL 3

Gene SSR2, Length 577 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2-204ENST00000467041 IFT122Q9HBG6 1241 aa25.24■■□□□ 1.63
SSR2-204ENST00000467041 DACT1Q9NYF0 836 aa25.24■■□□□ 1.63
SSR2-204ENST00000467041 NCOR1O75376 2440 aa25.23■■□□□ 1.63
SSR2-204ENST00000467041 POTEMA6NI47 508 aa25.23■■□□□ 1.63
SSR2-204ENST00000467041 HOXA2O43364 376 aa25.23■■□□□ 1.63
SSR2-204ENST00000467041 ITGB1P05556 798 aa25.23■■□□□ 1.63
SSR2-204ENST00000467041 GNL2Q13823 731 aaKnown RBP25.23■■□□□ 1.63
SSR2-204ENST00000467041 EMC2Q15006 297 aa25.23■■□□□ 1.63
SSR2-204ENST00000467041 ZNF174Q15697 407 aa25.23■■□□□ 1.63
SSR2-204ENST00000467041 TCEAL5Q5H9L2 206 aa25.23■■□□□ 1.63
SSR2-204ENST00000467041 KLHL23Q8NBE8 558 aa25.23■■□□□ 1.63
SSR2-204ENST00000467041 TCP11Q8WWU5 503 aa25.23■■□□□ 1.63
SSR2-204ENST00000467041 TMEM117Q9H0C3 514 aa25.23■■□□□ 1.63
SSR2-204ENST00000467041 BMP2KQ9NSY1 1161 aaPredicted RBP25.23■■□□□ 1.63
SSR2-204ENST00000467041 ANKEF1Q9NU02 776 aa25.23■■□□□ 1.63
SSR2-204ENST00000467041 RNF19AQ9NV58 838 aa25.23■■□□□ 1.63
SSR2-204ENST00000467041 TYW1Q9NV66 732 aaKnown RBP25.23■■□□□ 1.63
SSR2-204ENST00000467041 KIAA1671Q9BY89 1806 aa25.22■■□□□ 1.63
SSR2-204ENST00000467041 EOMESO95936 686 aa25.22■■□□□ 1.63
SSR2-204ENST00000467041 U2AF2P26368 475 aaKnown RBP eCLIP25.22■■□□□ 1.63
SSR2-204ENST00000467041 TRAPPC10P48553 1259 aa25.22■■□□□ 1.63
SSR2-204ENST00000467041 CAMK1Q14012 370 aa25.22■■□□□ 1.63
SSR2-204ENST00000467041 SPPL3Q8TCT6 385 aa25.22■■□□□ 1.63
SSR2-204ENST00000467041 TMX3Q96JJ7 454 aa25.22■■□□□ 1.63
SSR2-204ENST00000467041 TRAIPQ9BWF2 469 aa25.22■■□□□ 1.63
SSR2-204ENST00000467041 AAASQ9NRG9 546 aa25.22■■□□□ 1.63
SSR2-204ENST00000467041 TCF20Q9UGU0 1960 aaKnown RBP25.22■■□□□ 1.63
SSR2-204ENST00000467041 ASAP2O43150 1006 aa25.21■■□□□ 1.63
SSR2-204ENST00000467041 OR52Z1P0C646 297 aa25.21■■□□□ 1.63
SSR2-204ENST00000467041 XRCC6P12956 609 aaKnown RBP eCLIP25.21■■□□□ 1.63
SSR2-204ENST00000467041 LAMTOR4Q0VGL1 99 aa25.21■■□□□ 1.63
SSR2-204ENST00000467041 TTC38Q5R3I4 469 aa25.21■■□□□ 1.63
SSR2-204ENST00000467041 SPOUT1Q5T280 376 aaKnown RBP25.21■■□□□ 1.63
SSR2-204ENST00000467041 CATSPER4Q7RTX7 472 aa25.21■■□□□ 1.63
SSR2-204ENST00000467041 ZNF598Q86UK7 904 aaKnown RBP25.21■■□□□ 1.63
SSR2-204ENST00000467041 TBC1D32Q96NH3 1257 aa25.21■■□□□ 1.63
SSR2-204ENST00000467041 CASD1Q96PB1 797 aa25.21■■□□□ 1.63
SSR2-204ENST00000467041 UHRF1Q96T88 793 aaPredicted RBP25.21■■□□□ 1.63
SSR2-204ENST00000467041 MTRQ99707 1265 aa25.21■■□□□ 1.63
SSR2-204ENST00000467041 XPNPEP1Q9NQW7 623 aa25.21■■□□□ 1.63
SSR2-204ENST00000467041 PCDHB12Q9Y5F1 795 aa25.21■■□□□ 1.63
SSR2-204ENST00000467041 CD2BP2O95400 341 aaKnown RBP25.2■■□□□ 1.62
SSR2-204ENST00000467041 SRGAP2CP0DJJ0 459 aa25.2■■□□□ 1.62
SSR2-204ENST00000467041 SPATA31C1P0DKV0 1188 aa25.2■■□□□ 1.62
SSR2-204ENST00000467041 DNAJB1P25685 340 aa25.2■■□□□ 1.62
SSR2-204ENST00000467041 TECP42680 631 aa25.2■■□□□ 1.62
SSR2-204ENST00000467041 COL19A1Q14993 1142 aa25.2■■□□□ 1.62
SSR2-204ENST00000467041 SRGAP1Q7Z6B7 1085 aa25.2■■□□□ 1.62
SSR2-204ENST00000467041 FERMT3Q86UX7 667 aa25.2■■□□□ 1.62
SSR2-204ENST00000467041 CWH43Q9H720 699 aa25.2■■□□□ 1.62
SSR2-204ENST00000467041 HCSTQ9UBK5 93 aa25.2■■□□□ 1.62
SSR2-204ENST00000467041 NOL7Q9UMY1 257 aaKnown RBP25.2■■□□□ 1.62
SSR2-204ENST00000467041 KIF3AQ9Y496 699 aa25.2■■□□□ 1.62
SSR2-204ENST00000467041 ATF7P17544 494 aaPredicted RBP25.19■■□□□ 1.62
SSR2-204ENST00000467041 KCNA5P22460 613 aa25.19■■□□□ 1.62
SSR2-204ENST00000467041 PHKA2P46019 1235 aa25.19■■□□□ 1.62
SSR2-204ENST00000467041 MCM2P49736 904 aa25.19■■□□□ 1.62
SSR2-204ENST00000467041 RARRES1P49788 294 aa25.19■■□□□ 1.62
SSR2-204ENST00000467041 LRRC55Q6ZSA7 311 aa25.19■■□□□ 1.62
SSR2-204ENST00000467041 CATSPER3Q86XQ3 398 aa25.19■■□□□ 1.62
SSR2-204ENST00000467041 ABI1Q8IZP0 508 aa25.19■■□□□ 1.62
SSR2-204ENST00000467041 RNF169Q8NCN4 708 aa25.19■■□□□ 1.62
SSR2-204ENST00000467041 PIGOQ8TEQ8 1089 aa25.19■■□□□ 1.62
SSR2-204ENST00000467041 POF1BQ8WVV4 589 aa25.19■■□□□ 1.62
SSR2-204ENST00000467041 PABPC5Q96DU9 382 aaKnown RBP25.19■■□□□ 1.62
SSR2-204ENST00000467041 TUFT1Q9NNX1 390 aa25.19■■□□□ 1.62
SSR2-204ENST00000467041 PIN4Q9Y237 131 aaKnown RBP25.19■■□□□ 1.62
SSR2-204ENST00000467041 ARID2Q68CP9 1835 aa25.19■■□□□ 1.62
SSR2-204ENST00000467041 TNFRSF10AO00220 468 aa25.18■■□□□ 1.62
SSR2-204ENST00000467041 NCK2O43639 380 aa25.18■■□□□ 1.62
SSR2-204ENST00000467041 DGAT1O75907 488 aa25.18■■□□□ 1.62
SSR2-204ENST00000467041 MXD4Q14582 209 aaPredicted RBP25.18■■□□□ 1.62
SSR2-204ENST00000467041 CSPP1Q1MSJ5 1256 aa25.18■■□□□ 1.62
SSR2-204ENST00000467041 LEXMQ3ZCV2 418 aa25.18■■□□□ 1.62
SSR2-204ENST00000467041 CLLU1OSQ5K130 101 aa25.18■■□□□ 1.62
SSR2-204ENST00000467041 TWF2Q6IBS0 349 aaKnown RBP25.18■■□□□ 1.62
SSR2-204ENST00000467041 C4orf32Q8N8J7 132 aa25.18■■□□□ 1.62
SSR2-204ENST00000467041 COLGALT1Q8NBJ5 622 aa25.18■■□□□ 1.62
SSR2-204ENST00000467041 RNF149Q8NC42 400 aa25.18■■□□□ 1.62
SSR2-204ENST00000467041 POLR3CQ9BUI4 534 aaPredicted RBP25.18■■□□□ 1.62
SSR2-204ENST00000467041 MINDY3Q9H8M7 445 aa25.18■■□□□ 1.62
SSR2-204ENST00000467041 AGPAT5Q9NUQ2 364 aa25.18■■□□□ 1.62
SSR2-204ENST00000467041 MUC3AQ02505 3323 aa25.17■■□□□ 1.62
SSR2-204ENST00000467041 A0A087WWV3 80 aa25.17■■□□□ 1.62
SSR2-204ENST00000467041 MED24O75448 989 aa25.17■■□□□ 1.62
SSR2-204ENST00000467041 SKIP12755 728 aa25.17■■□□□ 1.62
SSR2-204ENST00000467041 LAG3P18627 525 aa25.17■■□□□ 1.62
SSR2-204ENST00000467041 TOB1P50616 345 aaPredicted RBP25.17■■□□□ 1.62
SSR2-204ENST00000467041 UBE3AQ05086 875 aa25.17■■□□□ 1.62
SSR2-204ENST00000467041 LRRC43Q8N309 656 aa25.17■■□□□ 1.62
SSR2-204ENST00000467041 CCDC43Q96MW1 224 aaKnown RBP25.17■■□□□ 1.62
SSR2-204ENST00000467041 ATG2AQ2TAZ0 1938 aa25.17■■□□□ 1.62
SSR2-204ENST00000467041 ZNF623O75123 536 aa25.16■■□□□ 1.62
SSR2-204ENST00000467041 CSPG5O95196 566 aa25.16■■□□□ 1.62
SSR2-204ENST00000467041 NBR1Q14596 966 aa25.16■■□□□ 1.62
SSR2-204ENST00000467041 ERMNQ8TAM6 284 aa25.16■■□□□ 1.62
SSR2-204ENST00000467041 NECAB3Q96P71 396 aaPredicted RBP25.16■■□□□ 1.62
SSR2-204ENST00000467041 FAM105AQ9NUU6 356 aa25.16■■□□□ 1.62
SSR2-204ENST00000467041 FGF18O76093 207 aa25.15■■□□□ 1.62
SSR2-204ENST00000467041 RPA1P27694 616 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms