RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 SPATA31C1P0DKV0 1188 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 CDC25AP30304 524 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 RFC5P40937 340 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 CCDC85BQ15834 202 aaPredicted RBP10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 ODR4Q5SWX8 454 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 IER5LQ5T953 404 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 HAUS3Q68CZ6 603 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 FAM173BQ6P4H8 233 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 DTHD1Q6ZMT9 781 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 C4orf32Q8N8J7 132 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 RNF169Q8NCN4 708 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 GDPD5Q8WTR4 605 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 PSPC1Q8WXF1 523 aaKnown RBP10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 HSD17B14Q9BPX1 270 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 JPH2Q9BR39 696 aaPredicted RBP10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 FTHL17Q9BXU8 183 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 ADAMTS10Q9H324 1103 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 DHX33Q9H6R0 707 aaKnown RBP10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 TUFT1Q9NNX1 390 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 INSL6Q9Y581 213 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 COL4A3BPQ9Y5P4 624 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 SQORQ9Y6N5 450 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 COL4A6Q14031 1691 aa10.85□□□□□ -0.67
RTFDC1-205ENST00000466260 IGKV6-21A0A0C4DH24 114 aa10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 VWA3AA6NCI4 1184 aa10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 DARSP14868 501 aaKnown RBP10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 ZSCAN20P17040 1043 aaPredicted RBP10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 PDCP20941 246 aa10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 SYT1P21579 422 aa10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 EIF4BP23588 611 aaKnown RBP10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 RARRES1P49788 294 aa10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 ATP2C1P98194 919 aaPredicted RBP10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 CEBPZQ03701 1054 aaKnown RBP10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 ADGRE1Q14246 886 aa10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 IL17AQ16552 155 aa10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 ECM1Q16610 540 aa10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 MAFAQ8NHW3 353 aaPredicted RBP10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 TCP11Q8WWU5 503 aa10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 TGS1Q96RS0 853 aaKnown RBP10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 PLIN2Q99541 437 aa10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 C17orf80Q9BSJ5 609 aa10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 GCOM2Q9BZD3 368 aaPredicted RBP10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 RAB34Q9BZG1 259 aa10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 POLR3FQ9H1D9 316 aaPredicted RBP10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 ATP6V0A4Q9HBG4 840 aa10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 GPRC5CQ9NQ84 441 aa10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 XPNPEP1Q9NQW7 623 aa10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 ANKEF1Q9NU02 776 aa10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 DDX19AQ9NUU7 478 aaKnown RBP10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 KIAA1024Q9UPX6 916 aa10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 PIN4Q9Y237 131 aaKnown RBP10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 TDRD15B5MCY1 1934 aaKnown RBP10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 ADGRA3Q8IWK6 1321 aa10.84□□□□□ -0.67
RTFDC1-205ENST00000466260 ARHGEF35A5YM69 484 aa10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 STAG3L1P0CL83 205 aa10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 SFPQP23246 707 aaKnown RBP eCLIP10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 RPA1P27694 616 aa10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 SARSP49591 514 aaKnown RBP10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 HTRA4P83105 476 aaPredicted RBP10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 LAMTOR4Q0VGL1 99 aa10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 RESTQ13127 1097 aa10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 BTG3Q14201 252 aaPredicted RBP10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 SF3A1Q15459 793 aaKnown RBP10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 FOXD4L6Q3SYB3 417 aaPredicted RBP10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 LONRF3Q496Y0 759 aa10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 SPOUT1Q5T280 376 aaKnown RBP10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 KRT79Q5XKE5 535 aa10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 FOXD4L3Q6VB84 417 aaPredicted RBP10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 CATSPER4Q7RTX7 472 aa10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 BRAPQ7Z569 592 aa10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 ZNF410Q86VK4 478 aa10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 NPAS4Q8IUM7 802 aa10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 FIBCD1Q8N539 461 aa10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 RNF149Q8NC42 400 aa10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 PRPF31Q8WWY3 499 aaKnown RBP10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 SNX21Q969T3 373 aa10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 INTS4Q96HW7 963 aaKnown RBP10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 NACC1Q96RE7 527 aa10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 POLR3CQ9BUI4 534 aaPredicted RBP10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 POLD4Q9HCU8 107 aa10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 PCDHB7Q9Y5E2 793 aa10.83□□□□□ -0.68
RTFDC1-205ENST00000466260 LRRIQ4A6NIV6 560 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 E9PMD0 336 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 LAD1O00515 517 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 STX6O43752 255 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 DGAT1O75907 488 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 LYPLA2O95372 231 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 SSBP05455 408 aaKnown RBP eCLIP10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 FGFR1P11362 822 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 LIG1P18858 919 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 CTNNB1P35222 781 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 GRB10Q13322 594 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 CAPSQ13938 189 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 NFKBIBQ15653 356 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 FAM102BQ5T8I3 360 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 TWF2Q6IBS0 349 aaKnown RBP10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 EXOC8Q8IYI6 725 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 IGSF22Q8N9C0 903 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 RASSF8Q8NHQ8 419 aa10.82□□□□□ -0.68
RTFDC1-205ENST00000466260 ASAP3Q8TDY4 903 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms