RNA–Protein interactions for RNA: ENST00000464480.1

HMGXB4-205, Transcript of HMG-box containing 4, humanhuman

TSL 2

Gene HMGXB4, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB4-205ENST00000464480 ZNF277Q9NRM2 450 aaPredicted RBP4.84□□□□□ -1.63
HMGXB4-205ENST00000464480 NTMQ9P121 344 aa4.84□□□□□ -1.63
HMGXB4-205ENST00000464480 SAE1Q9UBE0 346 aaPredicted RBP4.84□□□□□ -1.63
HMGXB4-205ENST00000464480 Q9UFV3 132 aa4.84□□□□□ -1.63
HMGXB4-205ENST00000464480 TMPRSS11EQ9UL52 423 aa4.84□□□□□ -1.63
HMGXB4-205ENST00000464480 ZBTB21Q9ULJ3 1066 aa4.84□□□□□ -1.63
HMGXB4-205ENST00000464480 CNOT6Q9ULM6 557 aaKnown RBP4.84□□□□□ -1.63
HMGXB4-205ENST00000464480 ZNF28P17035 718 aa4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 RPL13P26373 211 aaKnown RBP4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 SLC16A1P53985 500 aa4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 CDK17Q00537 523 aa4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 MESP2Q0VG99 397 aa4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 ODF1Q14990 250 aa4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 LRRC41Q15345 812 aa4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 MAN2A1Q16706 1144 aa4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 ZNF385BQ569K4 471 aa4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 PRR31Q5SQ13 230 aa4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 CXorf57Q6NSI4 855 aaKnown RBP4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 SLC41A1Q8IVJ1 513 aa4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 TCEAL8Q8IYN2 117 aa4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 MIER2Q8N344 545 aa4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 ABCF1Q8NE71 845 aaKnown RBP eCLIP4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 TSPEARQ8WU66 669 aa4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 ZCCHC14Q8WYQ9 949 aaKnown RBP4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 DYDC2Q96IM9 177 aa4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 C8orf48Q96LL4 319 aa4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 PWWP2AQ96N64 755 aa4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 HAPLN2Q9GZV7 340 aa4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 PRDM12Q9H4Q4 367 aa4.83□□□□□ -1.64
HMGXB4-205ENST00000464480 GOLGA6CA6NDK9 693 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 GOLGA6BA6NDN3 693 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 KRTAP9-1A8MXZ3 250 aaPredicted RBP4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 NDUFS2O75306 463 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 HMGCRP04035 888 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 CELA3BP08861 270 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 GOLGA6DP0CG33 693 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 COL6A1P12109 1028 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 ATF3P18847 181 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 C5AR1P21730 350 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 POLD1P28340 1107 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 CYP2C19P33261 490 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 IL13P35225 146 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 ETV4P43268 484 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 MLLT6P55198 1093 aaPredicted RBP4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 ADKP55263 362 aaKnown RBP4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 TOP3AQ13472 1001 aaPredicted RBP4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 SSPNQ14714 243 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 MLC1Q15049 377 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 LMBR1LQ6UX01 489 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 ATG14Q6ZNE5 492 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 SAPCD2Q86UD0 394 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 LYSMD2Q8IV50 215 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 MAGEB6Q8N7X4 407 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 BHLHE22Q8NFJ8 381 aaPredicted RBP4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 FATE1Q969F0 183 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 GEMIN8Q9NWZ8 242 aaKnown RBP4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 GOLGA6AQ9NYA3 693 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 EVLQ9UI08 416 aaPredicted RBP4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 NOB1Q9ULX3 412 aaKnown RBP4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 KCTD3Q9Y597 815 aa4.82□□□□□ -1.64
HMGXB4-205ENST00000464480 BTBD11A6QL63 1104 aa4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 SEC24DO94855 1032 aaPredicted RBP4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 FSBPO95073 299 aa4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 TSPAN15O95858 294 aa4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 C8AP07357 584 aa4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 KCNQ1P51787 676 aa4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 SESN2P58004 480 aaPredicted RBP4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 CCT2P78371 535 aaKnown RBP4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 EIF4HQ15056 248 aaKnown RBP4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 VWA3BQ502W6 1294 aa4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 GJC2Q5T442 439 aaPredicted RBP4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 GAREM2Q75VX8 874 aa4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 REXO1L1PQ8IX06 675 aa4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 RTKN2Q8IZC4 609 aa4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 WDR92Q96MX6 357 aa4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 KRTAP4-12Q9BQ66 201 aa4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 CD320Q9NPF0 282 aa4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 SPATA6Q9NWH7 488 aaPredicted RBP4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 SAP30BPQ9UHR5 308 aaKnown RBP4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 DNAI1Q9UI46 699 aa4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 CDC42EP3Q9UKI2 254 aa4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 VWA7Q9Y334 891 aa4.81□□□□□ -1.64
HMGXB4-205ENST00000464480 KRTAP9-6A0A140TA67 174 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 SH3D21A4FU49 640 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 DDX3XO00571 662 aaKnown RBP eCLIP4.8□□□□□ -1.641e-7■□□□□ 11
HMGXB4-205ENST00000464480 KIF3BO15066 747 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 DTNBO60941 627 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 KLHL18O94889 574 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 ZRANB2O95218 330 aaKnown RBP eCLIP4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 CYP1A1P04798 512 aaPredicted RBP4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 HSPA6P17066 643 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 AKAP5P24588 427 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 MEOX1P50221 254 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 STAT5BP51692 787 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 MEF2AQ02078 507 aaPredicted RBP4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 KIF23Q02241 960 aaPredicted RBP4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 MALLQ13021 153 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 TCIRG1Q13488 830 aa4.8□□□□□ -1.64
HMGXB4-205ENST00000464480 GTF2H3Q13889 308 aa4.8□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms