RNA–Protein interactions for RNA: ENST00000462537.3

CDKN1A-206, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

TSL 3

Gene CDKN1A, Length 553 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-206ENST00000462537 DBR1Q9UK59 544 aaKnown RBP20.62■□□□□ 0.89
CDKN1A-206ENST00000462537 STK24Q9Y6E0 443 aa20.62■□□□□ 0.89
CDKN1A-206ENST00000462537 C9IYK1 514 aa20.61■□□□□ 0.89
CDKN1A-206ENST00000462537 ASAP2O43150 1006 aa20.61■□□□□ 0.89
CDKN1A-206ENST00000462537 CTNNB1P35222 781 aa20.61■□□□□ 0.89
CDKN1A-206ENST00000462537 GATMP50440 423 aa20.61■□□□□ 0.89
CDKN1A-206ENST00000462537 ATP2C1P98194 919 aaPredicted RBP20.61■□□□□ 0.89
CDKN1A-206ENST00000462537 EPC2Q52LR7 807 aa20.61■□□□□ 0.89
CDKN1A-206ENST00000462537 CRIPAKQ8N1N5 446 aa20.61■□□□□ 0.89
CDKN1A-206ENST00000462537 SNX21Q969T3 373 aa20.61■□□□□ 0.89
CDKN1A-206ENST00000462537 IFT122Q9HBG6 1241 aa20.61■□□□□ 0.89
CDKN1A-206ENST00000462537 PIN4Q9Y237 131 aaKnown RBP20.61■□□□□ 0.89
CDKN1A-206ENST00000462537 ARHGEF35A5YM69 484 aa20.6■□□□□ 0.89
CDKN1A-206ENST00000462537 SYT1P21579 422 aa20.6■□□□□ 0.89
CDKN1A-206ENST00000462537 TFDP1Q14186 410 aa20.6■□□□□ 0.89
CDKN1A-206ENST00000462537 MXD4Q14582 209 aaPredicted RBP20.6■□□□□ 0.89
CDKN1A-206ENST00000462537 KRT79Q5XKE5 535 aa20.6■□□□□ 0.89
CDKN1A-206ENST00000462537 MAEAQ7L5Y9 396 aa20.6■□□□□ 0.89
CDKN1A-206ENST00000462537 CMTR2Q8IYT2 770 aaKnown RBP20.6■□□□□ 0.89
CDKN1A-206ENST00000462537 RNF149Q8NC42 400 aa20.6■□□□□ 0.89
CDKN1A-206ENST00000462537 RNF169Q8NCN4 708 aa20.6■□□□□ 0.89
CDKN1A-206ENST00000462537 TMEM161AQ9NX61 479 aa20.6■□□□□ 0.89
CDKN1A-206ENST00000462537 DACT1Q9NYF0 836 aa20.6■□□□□ 0.89
CDKN1A-206ENST00000462537 RWDD3Q9Y3V2 267 aa20.6■□□□□ 0.89
CDKN1A-206ENST00000462537 MTCH2Q9Y6C9 303 aa20.6■□□□□ 0.89
CDKN1A-206ENST00000462537 PP2D1A8MPX8 630 aa20.59■□□□□ 0.89
CDKN1A-206ENST00000462537 MUTP22033 750 aa20.59■□□□□ 0.89
CDKN1A-206ENST00000462537 PHKA2P46019 1235 aa20.59■□□□□ 0.89
CDKN1A-206ENST00000462537 IL17AQ16552 155 aa20.59■□□□□ 0.89
CDKN1A-206ENST00000462537 TWF2Q6IBS0 349 aaKnown RBP20.59■□□□□ 0.89
CDKN1A-206ENST00000462537 SRGAP1Q7Z6B7 1085 aa20.59■□□□□ 0.89
CDKN1A-206ENST00000462537 POLR3FQ9H1D9 316 aaPredicted RBP20.59■□□□□ 0.89
CDKN1A-206ENST00000462537 CHST12Q9NRB3 414 aa20.59■□□□□ 0.89
CDKN1A-206ENST00000462537 DDX19AQ9NUU7 478 aaKnown RBP20.59■□□□□ 0.89
CDKN1A-206ENST00000462537 KIAA1024Q9UPX6 916 aa20.59■□□□□ 0.89
CDKN1A-206ENST00000462537 MRPL42Q9Y6G3 142 aaKnown RBP20.59■□□□□ 0.89
CDKN1A-206ENST00000462537 KIAA1671Q9BY89 1806 aa20.59■□□□□ 0.89
CDKN1A-206ENST00000462537 EYSQ5T1H1 3165 aa20.58■□□□□ 0.89
CDKN1A-206ENST00000462537 VWA3AA6NCI4 1184 aa20.58■□□□□ 0.89
CDKN1A-206ENST00000462537 TBKBP1A7MCY6 615 aa20.58■□□□□ 0.89
CDKN1A-206ENST00000462537 LPXNO60711 386 aa20.58■□□□□ 0.89
CDKN1A-206ENST00000462537 HSP90AA1P07900 732 aaKnown RBP20.58■□□□□ 0.89
CDKN1A-206ENST00000462537 FAM189BP81408 668 aa20.58■□□□□ 0.89
CDKN1A-206ENST00000462537 GPM6BQ13491 265 aa20.58■□□□□ 0.89
CDKN1A-206ENST00000462537 ZRSR1Q15695 479 aaKnown RBP20.58■□□□□ 0.89
CDKN1A-206ENST00000462537 ECM1Q16610 540 aa20.58■□□□□ 0.89
CDKN1A-206ENST00000462537 FAM102BQ5T8I3 360 aa20.58■□□□□ 0.89
CDKN1A-206ENST00000462537 PADI6Q6TGC4 694 aa20.58■□□□□ 0.89
CDKN1A-206ENST00000462537 MCPH1Q8NEM0 835 aa20.58■□□□□ 0.89
CDKN1A-206ENST00000462537 ASAP3Q8TDY4 903 aa20.58■□□□□ 0.89
CDKN1A-206ENST00000462537 ELAC1Q9H777 363 aaKnown RBP20.58■□□□□ 0.89
CDKN1A-206ENST00000462537 FNDC1Q4ZHG4 1894 aaPredicted RBP20.58■□□□□ 0.88
CDKN1A-206ENST00000462537 TRANK1O15050 2925 aa20.57■□□□□ 0.88
CDKN1A-206ENST00000462537 FGFR1P11362 822 aa20.57■□□□□ 0.88
CDKN1A-206ENST00000462537 POU3F3P20264 500 aaPredicted RBP20.57■□□□□ 0.88
CDKN1A-206ENST00000462537 CDC25AP30304 524 aa20.57■□□□□ 0.88
CDKN1A-206ENST00000462537 ARL2P36404 184 aa20.57■□□□□ 0.88
CDKN1A-206ENST00000462537 SPOUT1Q5T280 376 aaKnown RBP20.57■□□□□ 0.88
CDKN1A-206ENST00000462537 ARL6IP4Q66PJ3 421 aaKnown RBP20.57■□□□□ 0.88
CDKN1A-206ENST00000462537 ECHDC2Q86YB7 292 aa20.57■□□□□ 0.88
CDKN1A-206ENST00000462537 CLP1Q92989 425 aaKnown RBP20.57■□□□□ 0.88
CDKN1A-206ENST00000462537 BHMT2Q9H2M3 363 aa20.57■□□□□ 0.88
CDKN1A-206ENST00000462537 MINDY3Q9H8M7 445 aa20.57■□□□□ 0.88
CDKN1A-206ENST00000462537 GPRC5CQ9NQ84 441 aa20.57■□□□□ 0.88
CDKN1A-206ENST00000462537 H3BNC9 293 aa20.56■□□□□ 0.88
CDKN1A-206ENST00000462537 HOXA2O43364 376 aa20.56■□□□□ 0.88
CDKN1A-206ENST00000462537 ERLIN2O94905 339 aa20.56■□□□□ 0.88
CDKN1A-206ENST00000462537 GLRA2P23416 452 aa20.56■□□□□ 0.88
CDKN1A-206ENST00000462537 BMPR1AP36894 532 aa20.56■□□□□ 0.88
CDKN1A-206ENST00000462537 CAPSQ13938 189 aa20.56■□□□□ 0.88
CDKN1A-206ENST00000462537 SKIV2LQ15477 1246 aaKnown RBP20.56■□□□□ 0.88
CDKN1A-206ENST00000462537 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.56■□□□□ 0.88
CDKN1A-206ENST00000462537 ABI1Q8IZP0 508 aa20.56■□□□□ 0.88
CDKN1A-206ENST00000462537 C11orf84Q9BUA3 381 aaPredicted RBP20.56■□□□□ 0.88
CDKN1A-206ENST00000462537 AGPAT5Q9NUQ2 364 aa20.56■□□□□ 0.88
CDKN1A-206ENST00000462537 LMCD1Q9NZU5 365 aa20.56■□□□□ 0.88
CDKN1A-206ENST00000462537 DNM3Q9UQ16 869 aa20.56■□□□□ 0.88
CDKN1A-206ENST00000462537 A0A0U1RQF3 1178 aa20.55■□□□□ 0.88
CDKN1A-206ENST00000462537 LRRIQ4A6NIV6 560 aa20.55■□□□□ 0.88
CDKN1A-206ENST00000462537 INO80B-WBP1J3KQ70 363 aa20.55■□□□□ 0.88
CDKN1A-206ENST00000462537 BMP15O95972 392 aa20.55■□□□□ 0.88
CDKN1A-206ENST00000462537 PTENP60484 403 aa20.55■□□□□ 0.88
CDKN1A-206ENST00000462537 SF3A1Q15459 793 aaKnown RBP20.55■□□□□ 0.88
CDKN1A-206ENST00000462537 PTPROQ16827 1216 aa20.55■□□□□ 0.88
CDKN1A-206ENST00000462537 CDK5RAP3Q96JB5 506 aa20.55■□□□□ 0.88
CDKN1A-206ENST00000462537 E9PMD0 336 aa20.54■□□□□ 0.88
CDKN1A-206ENST00000462537 C5orf67F2Z3F1 127 aa20.54■□□□□ 0.88
CDKN1A-206ENST00000462537 STX6O43752 255 aa20.54■□□□□ 0.88
CDKN1A-206ENST00000462537 EOMESO95936 686 aa20.54■□□□□ 0.88
CDKN1A-206ENST00000462537 RB1P06400 928 aa20.54■□□□□ 0.88
CDKN1A-206ENST00000462537 LINC00271P0C7V0 271 aa20.54■□□□□ 0.88
CDKN1A-206ENST00000462537 CYP11B2P19099 503 aa20.54■□□□□ 0.88
CDKN1A-206ENST00000462537 RAB27AP51159 221 aa20.54■□□□□ 0.88
CDKN1A-206ENST00000462537 RESTQ13127 1097 aa20.54■□□□□ 0.88
CDKN1A-206ENST00000462537 MMTAG2Q9BU76 263 aaKnown RBP20.54■□□□□ 0.88
CDKN1A-206ENST00000462537 TMEM117Q9H0C3 514 aa20.54■□□□□ 0.88
CDKN1A-206ENST00000462537 FAM105AQ9NUU6 356 aa20.54■□□□□ 0.88
CDKN1A-206ENST00000462537 EYA4O95677 639 aa20.53■□□□□ 0.88
CDKN1A-206ENST00000462537 SKIP12755 728 aa20.53■□□□□ 0.88
CDKN1A-206ENST00000462537 POU5F1BQ06416 359 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms