RNA–Protein interactions for RNA: ENST00000460633.1

HLA-DQA1-205, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 5,450 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-205ENST00000460633 RGMBQ6NW40 437 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ZNF467Q7Z7K2 595 aaPredicted RBP6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 VSTM4Q8IW00 320 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ZNF274Q96GC6 653 aaPredicted RBP6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 RPRD1BQ9NQG5 326 aaKnown RBP6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 HYOU1Q9Y4L1 999 aa6.72□□□□□ -1.33
HLA-DQA1-205ENST00000460633 INO80B-WBP1J3KQ70 363 aa6.71□□□□□ -1.33
HLA-DQA1-205ENST00000460633 ATP1A3P13637 1013 aa6.71□□□□□ -1.33
HLA-DQA1-205ENST00000460633 DPP6P42658 865 aa6.71□□□□□ -1.33
HLA-DQA1-205ENST00000460633 IFNAR2P48551 515 aa6.71□□□□□ -1.33
HLA-DQA1-205ENST00000460633 COPB1P53618 953 aaKnown RBP6.71□□□□□ -1.33
HLA-DQA1-205ENST00000460633 C12orf50Q8NA57 414 aaPredicted RBP6.71□□□□□ -1.33
HLA-DQA1-205ENST00000460633 KBTBD3Q8NAB2 608 aa6.71□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SMC6Q96SB8 1091 aa6.71□□□□□ -1.33
HLA-DQA1-205ENST00000460633 CDK5RAP1Q96SZ6 601 aaKnown RBP6.71□□□□□ -1.33
HLA-DQA1-205ENST00000460633 VPS37BQ9H9H4 285 aa6.71□□□□□ -1.33
HLA-DQA1-205ENST00000460633 KIAA1586Q9HCI6 787 aa6.71□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SPATS2LQ9NUQ6 558 aaKnown RBP6.71□□□□□ -1.33
HLA-DQA1-205ENST00000460633 BCAP29Q9UHQ4 241 aa6.71□□□□□ -1.33
HLA-DQA1-205ENST00000460633 SUFUQ9UMX1 484 aa6.71□□□□□ -1.33
HLA-DQA1-205ENST00000460633 MYPNQ86TC9 1320 aa6.71□□□□□ -1.33
HLA-DQA1-205ENST00000460633 GOLGA8MH3BSY2 632 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 DDX39AO00148 427 aaKnown RBP6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 INPP4BO15327 924 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 HUS1O60921 280 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 TADA2AO75478 443 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 OR52Z1P0C646 297 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SP3Q02447 781 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 FKBP1CQ5VVH2 108 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 PIK3AP1Q6ZUJ8 805 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 DDX53Q86TM3 631 aaKnown RBP6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 VSIG1Q86XK7 387 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 ACRBPQ8NEB7 543 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 TRIM58Q8NG06 486 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 TBC1D16Q8TBP0 767 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 FHDC1Q9C0D6 1143 aaPredicted RBP6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 HAUS4Q9H6D7 363 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 ECT2Q9H8V3 914 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 RCOR1Q9UKL0 485 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 EPN1Q9Y6I3 576 aaPredicted RBP6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 C6orf222P0C671 652 aaPredicted RBP6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 TNFAIP3P21580 790 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 ARL4AP40617 200 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 RAB27AP51159 221 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SLC20A2Q08357 652 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 RESTQ13127 1097 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 CALCOCO2Q13137 446 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 MTMR3Q13615 1198 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 MORC3Q14149 939 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 GKAP1Q5VSY0 366 aaPredicted RBP6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 TOGARAM2Q6ZUX3 1019 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 CCDC170Q8IYT3 715 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 RNF10Q8N5U6 811 aaKnown RBP6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 MGARPQ8TDB4 240 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 VCXQ9H320 206 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 TBC1D22BQ9NU19 505 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 ANGPTL3Q9Y5C1 460 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 PCDHA5Q9Y5H7 936 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 BUB1O43683 1085 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 EXOC3O60645 756 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 TOMM70O94826 608 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SKP1P63208 163 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 KRT76Q01546 638 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 C2orf54Q08AI8 447 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 CRY2Q49AN0 593 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 C4orf50Q6ZRC1 276 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SRLQ86TD4 932 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 MAGEF1Q9HAY2 307 aa6.71□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SLC9A3R1O14745 358 aaPredicted RBP6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 THAP12O43422 761 aa6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 PDIA3P30101 505 aaKnown RBP6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 PPM1AP35813 382 aa6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 MLLT1Q03111 559 aaPredicted RBP6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SCARF1Q14162 830 aa6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SUZ12Q15022 739 aaKnown RBP6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 CCDC38Q502W7 563 aa6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 XRRA1Q6P2D8 792 aa6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 HDDC3Q8N4P3 179 aa6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 UBL4BQ8N7F7 174 aa6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 CCDC63Q8NA47 563 aa6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 MCPH1Q8NEM0 835 aa6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SHCBP1Q8NEM2 672 aa6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 ZSCAN18Q8TBC5 510 aaPredicted RBP6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 ZKSCAN4Q969J2 545 aaPredicted RBP6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 PGBD1Q96JS3 809 aa6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 RTFDC1Q9BY42 306 aaPredicted RBP6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 TMEM206Q9H813 350 aa6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 NR2E1Q9Y466 385 aa6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 C4AP0C0L4 1744 aa6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 PITPNM2Q9BZ72 1349 aa6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 TPD52L2O43399 206 aaKnown RBP6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SASH1O94885 1247 aa6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 AARSP49588 968 aaKnown RBP eCLIP6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 AP3M2P53677 418 aa6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 HIRAP54198 1017 aaPredicted RBP6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 LAMB3Q13751 1172 aa6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 SPATA1Q5VX52 437 aa6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 CTU1Q7Z7A3 348 aaKnown RBP6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 DSG4Q86SJ6 1040 aa6.7□□□□□ -1.34
HLA-DQA1-205ENST00000460633 TRIM48Q8IWZ4 208 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms