RNA–Protein interactions for RNA: ENST00000456754.6

TIMP1-205, Transcript of TIMP metallopeptidase inhibitor 1, humanhuman

TSL 1 (best) BASIC

Gene TIMP1, Length 1,095 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP1-205ENST00000456754 CAND2O75155 1236 aa15.58■□□□□ 0.08
TIMP1-205ENST00000456754 CXCL10P02778 98 aa15.58■□□□□ 0.08
TIMP1-205ENST00000456754 EDN1P05305 212 aa15.58■□□□□ 0.08
TIMP1-205ENST00000456754 SYKP43405 635 aa15.58■□□□□ 0.08
TIMP1-205ENST00000456754 CRYBB1P53674 252 aaPredicted RBP15.58■□□□□ 0.08
TIMP1-205ENST00000456754 SNW1Q13573 536 aaKnown RBP15.58■□□□□ 0.08
TIMP1-205ENST00000456754 ZNF365Q70YC5 407 aa15.58■□□□□ 0.08
TIMP1-205ENST00000456754 SV2BQ7L1I2 683 aa15.58■□□□□ 0.08
TIMP1-205ENST00000456754 FMR1NBQ8N0W7 255 aaPredicted RBP15.58■□□□□ 0.08
TIMP1-205ENST00000456754 IQUBQ8NA54 791 aa15.58■□□□□ 0.08
TIMP1-205ENST00000456754 ENGASEQ8NFI3 743 aa15.58■□□□□ 0.08
TIMP1-205ENST00000456754 DBF4BQ8NFT6 615 aa15.58■□□□□ 0.08
TIMP1-205ENST00000456754 TCP11Q8WWU5 503 aa15.58■□□□□ 0.08
TIMP1-205ENST00000456754 DDX12PQ92771 950 aa15.58■□□□□ 0.08
TIMP1-205ENST00000456754 DNAJC19Q96DA6 116 aa15.58■□□□□ 0.08
TIMP1-205ENST00000456754 GDF15Q99988 308 aa15.58■□□□□ 0.08
TIMP1-205ENST00000456754 JPH2Q9BR39 696 aaPredicted RBP15.58■□□□□ 0.08
TIMP1-205ENST00000456754 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.58■□□□□ 0.08
TIMP1-205ENST00000456754 TMX1Q9H3N1 280 aa15.58■□□□□ 0.08
TIMP1-205ENST00000456754 IL23AQ9NPF7 189 aa15.58■□□□□ 0.08
TIMP1-205ENST00000456754 KBTBD4Q9NVX7 518 aa15.58■□□□□ 0.08
TIMP1-205ENST00000456754 MICAL3Q7RTP6 2002 aa15.57■□□□□ 0.08
TIMP1-205ENST00000456754 GOLGA6L4A6NEF3 574 aa15.57■□□□□ 0.08
TIMP1-205ENST00000456754 LRRIQ4A6NIV6 560 aa15.57■□□□□ 0.08
TIMP1-205ENST00000456754 TTLL13PA6NNM8 815 aa15.57■□□□□ 0.08
TIMP1-205ENST00000456754 NR1I2O75469 434 aa15.57■□□□□ 0.08
TIMP1-205ENST00000456754 ZNF202O95125 648 aa15.57■□□□□ 0.08
TIMP1-205ENST00000456754 KRT18P05783 430 aaKnown RBP15.57■□□□□ 0.08
TIMP1-205ENST00000456754 DARSP14868 501 aaKnown RBP15.57■□□□□ 0.08
TIMP1-205ENST00000456754 PEX3P56589 373 aa15.57■□□□□ 0.08
TIMP1-205ENST00000456754 CUL4BQ13620 913 aa15.57■□□□□ 0.08
TIMP1-205ENST00000456754 PLEKHG4Q58EX7 1191 aa15.57■□□□□ 0.08
TIMP1-205ENST00000456754 TMEM240Q5SV17 173 aa15.57■□□□□ 0.08
TIMP1-205ENST00000456754 CHRDL2Q6WN34 429 aa15.57■□□□□ 0.08
TIMP1-205ENST00000456754 OTOP2Q7RTS6 562 aa15.57■□□□□ 0.08
TIMP1-205ENST00000456754 KCTD17Q8N5Z5 321 aa15.57■□□□□ 0.08
TIMP1-205ENST00000456754 LINC01599Q8WXQ3 324 aa15.57■□□□□ 0.08
TIMP1-205ENST00000456754 HPS3Q969F9 1004 aa15.57■□□□□ 0.08
TIMP1-205ENST00000456754 PAGE5Q96GU1 130 aa15.57■□□□□ 0.08
TIMP1-205ENST00000456754 FGFBP2Q9BYJ0 223 aa15.57■□□□□ 0.08
TIMP1-205ENST00000456754 ZHX3Q9H4I2 956 aa15.57■□□□□ 0.08
TIMP1-205ENST00000456754 ERVK-5Q9HDB9 667 aa15.57■□□□□ 0.08
TIMP1-205ENST00000456754 CXXC1Q9P0U4 656 aaPredicted RBP15.57■□□□□ 0.08
TIMP1-205ENST00000456754 PADI3Q9ULW8 664 aa15.57■□□□□ 0.08
TIMP1-205ENST00000456754 ST3GAL5Q9UNP4 418 aa15.57■□□□□ 0.08
TIMP1-205ENST00000456754 GAS2O43903 313 aaKnown RBP15.56■□□□□ 0.08
TIMP1-205ENST00000456754 MGEA5O60502 916 aa15.56■□□□□ 0.08
TIMP1-205ENST00000456754 PTENP60484 403 aa15.56■□□□□ 0.08
TIMP1-205ENST00000456754 NFX1Q12986 1120 aaKnown RBP15.56■□□□□ 0.08
TIMP1-205ENST00000456754 PPIGQ13427 754 aaKnown RBP eCLIP15.56■□□□□ 0.08
TIMP1-205ENST00000456754 SHHQ15465 462 aa15.56■□□□□ 0.08
TIMP1-205ENST00000456754 TSHZ1Q6ZSZ6 1077 aa15.56■□□□□ 0.08
TIMP1-205ENST00000456754 TMCO2Q7Z6W1 182 aaPredicted RBP15.56■□□□□ 0.08
TIMP1-205ENST00000456754 EXOC8Q8IYI6 725 aa15.56■□□□□ 0.08
TIMP1-205ENST00000456754 ERCC4Q92889 916 aaPredicted RBP15.56■□□□□ 0.08
TIMP1-205ENST00000456754 IFIH1Q9BYX4 1025 aaKnown RBP15.56■□□□□ 0.08
TIMP1-205ENST00000456754 UBE2OQ9C0C9 1292 aaKnown RBP15.56■□□□□ 0.08
TIMP1-205ENST00000456754 LMBRD1Q9NUN5 540 aa15.56■□□□□ 0.08
TIMP1-205ENST00000456754 TBC1D7Q9P0N9 293 aa15.56■□□□□ 0.08
TIMP1-205ENST00000456754 CCDC169A6NNP5 214 aa15.55■□□□□ 0.08
TIMP1-205ENST00000456754 SLC16A4O15374 487 aa15.55■□□□□ 0.08
TIMP1-205ENST00000456754 B4GALT5O43286 388 aa15.55■□□□□ 0.08
TIMP1-205ENST00000456754 RPS6KA5O75582 802 aa15.55■□□□□ 0.08
TIMP1-205ENST00000456754 SLFN14P0C7P3 912 aa15.55■□□□□ 0.08
TIMP1-205ENST00000456754 EIF4BP23588 611 aaKnown RBP15.55■□□□□ 0.08
TIMP1-205ENST00000456754 NPTX2P47972 431 aa15.55■□□□□ 0.08
TIMP1-205ENST00000456754 MBTD1Q05BQ5 628 aa15.55■□□□□ 0.08
TIMP1-205ENST00000456754 MXD4Q14582 209 aaPredicted RBP15.55■□□□□ 0.08
TIMP1-205ENST00000456754 KRBA2Q6ZNG9 492 aa15.55■□□□□ 0.08
TIMP1-205ENST00000456754 TAS1R3Q7RTX0 852 aa15.55■□□□□ 0.08
TIMP1-205ENST00000456754 RTN4RL1Q86UN2 441 aaPredicted RBP15.55■□□□□ 0.08
TIMP1-205ENST00000456754 ZNF410Q86VK4 478 aa15.55■□□□□ 0.08
TIMP1-205ENST00000456754 SFR1Q86XK3 245 aa15.55■□□□□ 0.08
TIMP1-205ENST00000456754 KIFAP3Q92845 792 aa15.55■□□□□ 0.08
TIMP1-205ENST00000456754 FIZ1Q96SL8 496 aa15.55■□□□□ 0.08
TIMP1-205ENST00000456754 GCOM2Q9BZD3 368 aaPredicted RBP15.55■□□□□ 0.08
TIMP1-205ENST00000456754 TRIM9Q9C026 710 aa15.55■□□□□ 0.08
TIMP1-205ENST00000456754 TNMDQ9H2S6 317 aa15.55■□□□□ 0.08
TIMP1-205ENST00000456754 RANBP2P49792 3224 aaKnown RBP15.54■□□□□ 0.08
TIMP1-205ENST00000456754 INO80B-WBP1J3KQ70 363 aa15.54■□□□□ 0.08
TIMP1-205ENST00000456754 FAM13AO94988 1023 aa15.54■□□□□ 0.08
TIMP1-205ENST00000456754 PLS3P13797 630 aa15.54■□□□□ 0.08
TIMP1-205ENST00000456754 IDEP14735 1019 aa15.54■□□□□ 0.08
TIMP1-205ENST00000456754 IBSPP21815 317 aaPredicted RBP15.54■□□□□ 0.08
TIMP1-205ENST00000456754 NMT1P30419 496 aaKnown RBP15.54■□□□□ 0.08
TIMP1-205ENST00000456754 RFC2P35250 354 aa15.54■□□□□ 0.08
TIMP1-205ENST00000456754 ZNF131P52739 623 aa15.54■□□□□ 0.08
TIMP1-205ENST00000456754 FAM160A1Q05DH4 1040 aa15.54■□□□□ 0.08
TIMP1-205ENST00000456754 PAK2Q13177 524 aa15.54■□□□□ 0.08
TIMP1-205ENST00000456754 AMHR2Q16671 573 aa15.54■□□□□ 0.08
TIMP1-205ENST00000456754 CSPP1Q1MSJ5 1256 aa15.54■□□□□ 0.08
TIMP1-205ENST00000456754 CDCA2Q69YH5 1023 aaPredicted RBP15.54■□□□□ 0.08
TIMP1-205ENST00000456754 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.54■□□□□ 0.08
TIMP1-205ENST00000456754 CDR2LQ86X02 465 aaPredicted RBP15.54■□□□□ 0.08
TIMP1-205ENST00000456754 CEP57L1Q8IYX8 460 aa15.54■□□□□ 0.08
TIMP1-205ENST00000456754 MYCT1Q8N699 235 aa15.54■□□□□ 0.08
TIMP1-205ENST00000456754 GLIS3Q8NEA6 775 aa15.54■□□□□ 0.08
TIMP1-205ENST00000456754 CPB2Q96IY4 423 aa15.54■□□□□ 0.08
TIMP1-205ENST00000456754 DRC1Q96MC2 740 aa15.54■□□□□ 0.08
TIMP1-205ENST00000456754 INO80BQ9C086 356 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms