RNA–Protein interactions for RNA: ENST00000455111.1

GPC1-206, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 841 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-206ENST00000455111 TNFRSF25Q93038 417 aa18.05■□□□□ 0.48
GPC1-206ENST00000455111 LPPQ93052 612 aa18.05■□□□□ 0.48
GPC1-206ENST00000455111 FAM122AQ96E09 287 aa18.05■□□□□ 0.48
GPC1-206ENST00000455111 S1PR5Q9H228 398 aa18.05■□□□□ 0.48
GPC1-206ENST00000455111 TLE6Q9H808 572 aa18.05■□□□□ 0.48
GPC1-206ENST00000455111 DDX25Q9UHL0 483 aaKnown RBP18.05■□□□□ 0.48
GPC1-206ENST00000455111 TCEAL9Q9UHQ7 104 aa18.05■□□□□ 0.48
GPC1-206ENST00000455111 ARIH1Q9Y4X5 557 aaPredicted RBP18.05■□□□□ 0.48
GPC1-206ENST00000455111 ZNF318Q5VUA4 2279 aa18.05■□□□□ 0.48
GPC1-206ENST00000455111 STK36Q9NRP7 1315 aa18.04■□□□□ 0.48
GPC1-206ENST00000455111 ZBTB39O15060 712 aa18.04■□□□□ 0.48
GPC1-206ENST00000455111 TMOD1P28289 359 aa18.04■□□□□ 0.48
GPC1-206ENST00000455111 ST3GAL1Q11201 340 aa18.04■□□□□ 0.48
GPC1-206ENST00000455111 PPP2R5CQ13362 524 aa18.04■□□□□ 0.48
GPC1-206ENST00000455111 CBX2Q14781 532 aaPredicted RBP18.04■□□□□ 0.48
GPC1-206ENST00000455111 HERC4Q5GLZ8 1057 aaPredicted RBP18.04■□□□□ 0.48
GPC1-206ENST00000455111 NLRP7Q8WX94 980 aa18.04■□□□□ 0.48
GPC1-206ENST00000455111 IFT122Q9HBG6 1241 aa18.04■□□□□ 0.48
GPC1-206ENST00000455111 FAM50BQ9Y247 325 aa18.04■□□□□ 0.48
GPC1-206ENST00000455111 LZTS1Q9Y250 596 aa18.04■□□□□ 0.48
GPC1-206ENST00000455111 NT5C1B-RDH14C9J2C7 533 aa18.03■□□□□ 0.48
GPC1-206ENST00000455111 CPLX1O14810 134 aa18.03■□□□□ 0.48
GPC1-206ENST00000455111 AFF1P51825 1210 aaKnown RBP18.03■□□□□ 0.48
GPC1-206ENST00000455111 AK2P54819 239 aa18.03■□□□□ 0.48
GPC1-206ENST00000455111 LONRF3Q496Y0 759 aa18.03■□□□□ 0.48
GPC1-206ENST00000455111 TMEM184AQ6ZMB5 413 aa18.03■□□□□ 0.48
GPC1-206ENST00000455111 HFE2Q6ZVN8 426 aa18.03■□□□□ 0.48
GPC1-206ENST00000455111 KRT25Q7Z3Z0 450 aa18.03■□□□□ 0.48
GPC1-206ENST00000455111 POTEDQ86YR6 584 aa18.03■□□□□ 0.48
GPC1-206ENST00000455111 LRRC43Q8N309 656 aa18.03■□□□□ 0.48
GPC1-206ENST00000455111 RNF169Q8NCN4 708 aa18.03■□□□□ 0.48
GPC1-206ENST00000455111 MICAL1Q8TDZ2 1067 aa18.03■□□□□ 0.48
GPC1-206ENST00000455111 C22orf23Q9BZE7 217 aa18.03■□□□□ 0.48
GPC1-206ENST00000455111 MINDY3Q9H8M7 445 aa18.03■□□□□ 0.48
GPC1-206ENST00000455111 AAASQ9NRG9 546 aa18.03■□□□□ 0.48
GPC1-206ENST00000455111 DDX11L8A8MPP1 907 aa18.02■□□□□ 0.48
GPC1-206ENST00000455111 ZSCAN20P17040 1043 aaPredicted RBP18.02■□□□□ 0.48
GPC1-206ENST00000455111 PHKA2P46019 1235 aa18.02■□□□□ 0.48
GPC1-206ENST00000455111 PSMC5P62195 406 aa18.02■□□□□ 0.48
GPC1-206ENST00000455111 NR5A1Q13285 461 aa18.02■□□□□ 0.48
GPC1-206ENST00000455111 PPP4R3AQ6IN85 833 aa18.02■□□□□ 0.48
GPC1-206ENST00000455111 GALNT17Q6IS24 598 aa18.02■□□□□ 0.48
GPC1-206ENST00000455111 PIK3AP1Q6ZUJ8 805 aa18.02■□□□□ 0.48
GPC1-206ENST00000455111 DENND4AQ7Z401 1863 aa18.02■□□□□ 0.48
GPC1-206ENST00000455111 RHPN2Q8IUC4 686 aa18.02■□□□□ 0.48
GPC1-206ENST00000455111 FAM177A1Q8N128 213 aaPredicted RBP18.02■□□□□ 0.48
GPC1-206ENST00000455111 NECAB1Q8N987 351 aa18.02■□□□□ 0.48
GPC1-206ENST00000455111 TCF25Q9BQ70 676 aa18.02■□□□□ 0.48
GPC1-206ENST00000455111 TRAIPQ9BWF2 469 aa18.02■□□□□ 0.48
GPC1-206ENST00000455111 APOL5Q9BWW9 433 aa18.02■□□□□ 0.48
GPC1-206ENST00000455111 VN1R3Q9BXE9 311 aa18.02■□□□□ 0.48
GPC1-206ENST00000455111 SUCLA2Q9P2R7 463 aaPredicted RBP18.02■□□□□ 0.48
GPC1-206ENST00000455111 HCN4Q9Y3Q4 1203 aa18.02■□□□□ 0.48
GPC1-206ENST00000455111 EOMESO95936 686 aa18.01■□□□□ 0.47
GPC1-206ENST00000455111 ME3Q16798 604 aa18.01■□□□□ 0.47
GPC1-206ENST00000455111 UBXN11Q5T124 520 aa18.01■□□□□ 0.47
GPC1-206ENST00000455111 ANKRD54Q6NXT1 300 aa18.01■□□□□ 0.47
GPC1-206ENST00000455111 NEK8Q86SG6 692 aa18.01■□□□□ 0.47
GPC1-206ENST00000455111 ZNF558Q96NG5 402 aa18.01■□□□□ 0.47
GPC1-206ENST00000455111 GCOM2Q9BZD3 368 aaPredicted RBP18.01■□□□□ 0.47
GPC1-206ENST00000455111 DHX33Q9H6R0 707 aaKnown RBP18.01■□□□□ 0.47
GPC1-206ENST00000455111 CYP26B1Q9NR63 512 aa18.01■□□□□ 0.47
GPC1-206ENST00000455111 BMP2KQ9NSY1 1161 aaPredicted RBP18.01■□□□□ 0.47
GPC1-206ENST00000455111 RGL1Q9NZL6 768 aa18.01■□□□□ 0.47
GPC1-206ENST00000455111 BCAR1P56945 870 aa18■□□□□ 0.47
GPC1-206ENST00000455111 CSPP1Q1MSJ5 1256 aa18■□□□□ 0.47
GPC1-206ENST00000455111 LLGL2Q6P1M3 1020 aa18■□□□□ 0.47
GPC1-206ENST00000455111 ZNF710Q8N1W2 664 aa18■□□□□ 0.47
GPC1-206ENST00000455111 PPP2R3CQ969Q6 453 aa18■□□□□ 0.47
GPC1-206ENST00000455111 TMEM143Q96AN5 459 aa18■□□□□ 0.47
GPC1-206ENST00000455111 CDCA3Q99618 268 aaPredicted RBP18■□□□□ 0.47
GPC1-206ENST00000455111 NRDE2Q9H7Z3 1164 aa18■□□□□ 0.47
GPC1-206ENST00000455111 XPNPEP1Q9NQW7 623 aa18■□□□□ 0.47
GPC1-206ENST00000455111 PLXNA3P51805 1871 aa17.99■□□□□ 0.47
GPC1-206ENST00000455111 C2orf71A6NGG8 1288 aa17.99■□□□□ 0.47
GPC1-206ENST00000455111 HOXA2O43364 376 aa17.99■□□□□ 0.47
GPC1-206ENST00000455111 CCNT1O60563 726 aaKnown RBP17.99■□□□□ 0.47
GPC1-206ENST00000455111 OFD1O75665 1012 aa17.99■□□□□ 0.47
GPC1-206ENST00000455111 SEC24BO95487 1268 aa17.99■□□□□ 0.47
GPC1-206ENST00000455111 HOXA11P31270 313 aaPredicted RBP17.99■□□□□ 0.47
GPC1-206ENST00000455111 QARSP47897 775 aaKnown RBP17.99■□□□□ 0.47
GPC1-206ENST00000455111 KANK3Q6NY19 840 aa17.99■□□□□ 0.47
GPC1-206ENST00000455111 AGMOQ6ZNB7 445 aa17.99■□□□□ 0.47
GPC1-206ENST00000455111 ZNF410Q86VK4 478 aa17.99■□□□□ 0.47
GPC1-206ENST00000455111 ZNF280BQ86YH2 543 aa17.99■□□□□ 0.47
GPC1-206ENST00000455111 AUTS2Q8WXX7 1259 aa17.99■□□□□ 0.47
GPC1-206ENST00000455111 EDAQ92838 391 aa17.99■□□□□ 0.47
GPC1-206ENST00000455111 DYDC2Q96IM9 177 aa17.99■□□□□ 0.47
GPC1-206ENST00000455111 FAM20AQ96MK3 541 aa17.99■□□□□ 0.47
GPC1-206ENST00000455111 NLRP4Q96MN2 994 aa17.99■□□□□ 0.47
GPC1-206ENST00000455111 SCLT1Q96NL6 688 aa17.99■□□□□ 0.47
GPC1-206ENST00000455111 PHF7Q9BWX1 381 aaPredicted RBP17.99■□□□□ 0.47
GPC1-206ENST00000455111 SLKQ9H2G2 1235 aaPredicted RBP17.99■□□□□ 0.47
GPC1-206ENST00000455111 CHST12Q9NRB3 414 aa17.99■□□□□ 0.47
GPC1-206ENST00000455111 FAM105AQ9NUU6 356 aa17.99■□□□□ 0.47
GPC1-206ENST00000455111 TBC1D13Q9NVG8 400 aa17.99■□□□□ 0.47
GPC1-206ENST00000455111 RNF216Q9NWF9 866 aaPredicted RBP17.99■□□□□ 0.47
GPC1-206ENST00000455111 SPG21Q9NZD8 308 aa17.99■□□□□ 0.47
GPC1-206ENST00000455111 DNAJB4Q9UDY4 337 aa17.99■□□□□ 0.47
GPC1-206ENST00000455111 C2orf16Q68DN1 1984 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms