RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 GPR37O15354 613 aa12.14□□□□□ -0.47
SCN9A-205ENST00000454569 TREHO43280 583 aa12.14□□□□□ -0.47
SCN9A-205ENST00000454569 PRPF6O94906 941 aaKnown RBP12.14□□□□□ -0.47
SCN9A-205ENST00000454569 ACLYP53396 1101 aa12.14□□□□□ -0.47
SCN9A-205ENST00000454569 TBC1D8BQ0IIM8 1120 aa12.14□□□□□ -0.47
SCN9A-205ENST00000454569 ODR4Q5SWX8 454 aa12.14□□□□□ -0.47
SCN9A-205ENST00000454569 KLHL10Q6JEL2 608 aa12.14□□□□□ -0.47
SCN9A-205ENST00000454569 EFCAB12Q6NXP0 572 aa12.14□□□□□ -0.47
SCN9A-205ENST00000454569 RUFY4Q6ZNE9 571 aa12.14□□□□□ -0.47
SCN9A-205ENST00000454569 EPM2AIP1Q7L775 607 aaPredicted RBP12.14□□□□□ -0.47
SCN9A-205ENST00000454569 LUZP1Q86V48 1076 aa12.14□□□□□ -0.47
SCN9A-205ENST00000454569 DHX40Q8IX18 779 aaKnown RBP12.14□□□□□ -0.47
SCN9A-205ENST00000454569 ADSSL1Q8N142 457 aa12.14□□□□□ -0.47
SCN9A-205ENST00000454569 SCFD1Q8WVM8 642 aa12.14□□□□□ -0.47
SCN9A-205ENST00000454569 ZNF333Q96JL9 665 aa12.14□□□□□ -0.47
SCN9A-205ENST00000454569 CTAGE1Q96RT6 745 aa12.14□□□□□ -0.47
SCN9A-205ENST00000454569 MTG1Q9BT17 334 aaPredicted RBP12.14□□□□□ -0.47
SCN9A-205ENST00000454569 PARVGQ9HBI0 331 aa12.14□□□□□ -0.47
SCN9A-205ENST00000454569 SPC25Q9HBM1 224 aa12.14□□□□□ -0.47
SCN9A-205ENST00000454569 COLQQ9Y215 455 aaPredicted RBP12.14□□□□□ -0.47
SCN9A-205ENST00000454569 USP20Q9Y2K6 914 aa12.14□□□□□ -0.47
SCN9A-205ENST00000454569 GOLGA6L3A6NEY3 463 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 SLC16A4O15374 487 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 TBCAO75347 108 aaKnown RBP12.13□□□□□ -0.47
SCN9A-205ENST00000454569 PLS3P13797 630 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 HOXC8P31273 242 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 RFC5P40937 340 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 NPTX2P47972 431 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 NCAPHQ15003 741 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 BRDTQ58F21 947 aaPredicted RBP12.13□□□□□ -0.47
SCN9A-205ENST00000454569 GDF6Q6KF10 455 aaPredicted RBP12.13□□□□□ -0.47
SCN9A-205ENST00000454569 ZNF720Q7Z2F6 126 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 NELFCDQ8IXH7 590 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 PRPF31Q8WWY3 499 aaKnown RBP12.13□□□□□ -0.47
SCN9A-205ENST00000454569 WNT8BQ93098 351 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 PPP1R16BQ96T49 567 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 STRA6Q9BX79 667 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 HSD3B7Q9H2F3 369 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 SEMA6BQ9H3T3 888 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 RMND1Q9NWS8 449 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 COL4A3BPQ9Y5P4 624 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 EDN1P05305 212 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 ZNF165P49910 485 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 PSMD2Q13200 908 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 CAPSQ13938 189 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 TAS1R3Q7RTX0 852 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 RNF180Q86T96 592 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 KIAA0319LQ8IZA0 1049 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 METTL13Q8N6R0 699 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 MLKLQ8NB16 471 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 MCPH1Q8NEM0 835 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 SLC7A3Q8WY07 619 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 MRPL44Q9H9J2 332 aaKnown RBP12.13□□□□□ -0.47
SCN9A-205ENST00000454569 OLFML3Q9NRN5 406 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 CTNND2Q9UQB3 1225 aa12.13□□□□□ -0.47
SCN9A-205ENST00000454569 COL1A2P08123 1366 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 ZMYM2Q9UBW7 1377 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 FSD2A1L4K1 749 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 MBLAC1A4D2B0 266 aaPredicted RBP12.12□□□□□ -0.47
SCN9A-205ENST00000454569 TISP43B9A030 160 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 AP5Z1O43299 807 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 MSCO60682 206 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 KPNA6O60684 536 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 VTNP04004 478 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 GAP43P17677 238 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 DEKP35659 375 aaKnown RBP12.12□□□□□ -0.47
SCN9A-205ENST00000454569 NCKAP1LP55160 1127 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 ANKRD40Q6AI12 368 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 NFRKBQ6P4R8 1299 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 AOPEPQ8N6M6 819 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 TMEM161BQ8NDZ6 487 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 ZNF507Q8TCN5 953 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 NELFBQ8WX92 580 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 KIFAP3Q92845 792 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 ARMC5Q96C12 935 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 EEF2KMTQ96G04 330 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 DRC1Q96MC2 740 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 DUSP9Q99956 384 aaKnown RBP12.12□□□□□ -0.47
SCN9A-205ENST00000454569 CDHR5Q9HBB8 845 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 SUCLA2Q9P2R7 463 aaPredicted RBP12.12□□□□□ -0.47
SCN9A-205ENST00000454569 OGDHLQ9ULD0 1010 aa12.12□□□□□ -0.47
SCN9A-205ENST00000454569 TRIP11Q15643 1979 aa12.11□□□□□ -0.47
SCN9A-205ENST00000454569 NRCAMQ92823 1304 aa12.11□□□□□ -0.47
SCN9A-205ENST00000454569 A0A1W2PQ45 241 aaPredicted RBP12.11□□□□□ -0.47
SCN9A-205ENST00000454569 A0A1W2PQY0 241 aa12.11□□□□□ -0.47
SCN9A-205ENST00000454569 CCDC169A6NNP5 214 aa12.11□□□□□ -0.47
SCN9A-205ENST00000454569 K7ENM7 598 aa12.11□□□□□ -0.47
SCN9A-205ENST00000454569 ZEB2O60315 1214 aa12.11□□□□□ -0.47
SCN9A-205ENST00000454569 CSDE1O75534 798 aaKnown RBP12.11□□□□□ -0.47
SCN9A-205ENST00000454569 GCNT3O95395 438 aa12.11□□□□□ -0.47
SCN9A-205ENST00000454569 SRGAP2CP0DJJ0 459 aa12.11□□□□□ -0.47
SCN9A-205ENST00000454569 TMEM62Q0P6H9 643 aa12.11□□□□□ -0.47
SCN9A-205ENST00000454569 LAMTOR4Q0VGL1 99 aa12.11□□□□□ -0.47
SCN9A-205ENST00000454569 COBLL1Q53SF7 1204 aa12.11□□□□□ -0.47
SCN9A-205ENST00000454569 HSP90AA4PQ58FG1 418 aa12.11□□□□□ -0.47
SCN9A-205ENST00000454569 IER5Q5VY09 327 aa12.11□□□□□ -0.47
SCN9A-205ENST00000454569 HAUS6Q7Z4H7 955 aa12.11□□□□□ -0.47
SCN9A-205ENST00000454569 RHPN2Q8IUC4 686 aa12.11□□□□□ -0.47
SCN9A-205ENST00000454569 FAM178BQ8IXR5 827 aa12.11□□□□□ -0.47
SCN9A-205ENST00000454569 C7orf31Q8N865 590 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms