RNA–Protein interactions for RNA: ENST00000449530.2

LSP1P3-201, Transcript of LSP1 pseudogene 3, humanhuman

BASIC

Gene LSP1P3, Length 208 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSP1P3-201ENST00000449530 FIBCD1Q8N539 461 aa13.29□□□□□ -0.28
LSP1P3-201ENST00000449530 FBXO22Q8NEZ5 403 aa13.29□□□□□ -0.28
LSP1P3-201ENST00000449530 RAB34Q9BZG1 259 aa13.29□□□□□ -0.28
LSP1P3-201ENST00000449530 RGS18Q9NS28 235 aa13.29□□□□□ -0.28
LSP1P3-201ENST00000449530 PP2D1A8MPX8 630 aa13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 C9IYK1 514 aa13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 GTPBP6O43824 516 aaPredicted RBP13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 ZSCAN20P17040 1043 aaPredicted RBP13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 RPA1P27694 616 aa13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 HOXD11P31277 338 aaPredicted RBP13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 CTNNB1P35222 781 aa13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 PRPHP41219 470 aa13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 CCDC85BQ15834 202 aaPredicted RBP13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 IL17AQ16552 155 aa13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 DTHD1Q6ZMT9 781 aa13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 SLC24A5Q71RS6 500 aa13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 CATSPER4Q7RTX7 472 aa13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 BRAPQ7Z569 592 aa13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 CRIPAKQ8N1N5 446 aa13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 IGSF22Q8N9C0 903 aa13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 SNX29Q8TEQ0 813 aa13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 ZNF689Q96CS4 500 aaPredicted RBP13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 INTS4Q96HW7 963 aaKnown RBP13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 NACC1Q96RE7 527 aa13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 POLR3FQ9H1D9 316 aaPredicted RBP13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 PCDHB7Q9Y5E2 793 aa13.28□□□□□ -0.28
LSP1P3-201ENST00000449530 TRANK1O15050 2925 aa13.27□□□□□ -0.28
LSP1P3-201ENST00000449530 PRRC2BQ5JSZ5 2229 aaKnown RBP13.27□□□□□ -0.28
LSP1P3-201ENST00000449530 ARHGEF35A5YM69 484 aa13.27□□□□□ -0.29
LSP1P3-201ENST00000449530 LPXNO60711 386 aa13.27□□□□□ -0.29
LSP1P3-201ENST00000449530 EPC2Q52LR7 807 aa13.27□□□□□ -0.29
LSP1P3-201ENST00000449530 FAM43BQ6ZT52 329 aaPredicted RBP13.27□□□□□ -0.29
LSP1P3-201ENST00000449530 MAEAQ7L5Y9 396 aa13.27□□□□□ -0.29
LSP1P3-201ENST00000449530 TMEM192Q8IY95 271 aa13.27□□□□□ -0.29
LSP1P3-201ENST00000449530 CMTR2Q8IYT2 770 aaKnown RBP13.27□□□□□ -0.29
LSP1P3-201ENST00000449530 RNF149Q8NC42 400 aa13.27□□□□□ -0.29
LSP1P3-201ENST00000449530 RNF169Q8NCN4 708 aa13.27□□□□□ -0.29
LSP1P3-201ENST00000449530 ASAP3Q8TDY4 903 aa13.27□□□□□ -0.29
LSP1P3-201ENST00000449530 ATXN2LQ8WWM7 1075 aaKnown RBP13.27□□□□□ -0.29
LSP1P3-201ENST00000449530 SNX21Q969T3 373 aa13.27□□□□□ -0.29
LSP1P3-201ENST00000449530 SAMD11Q96NU1 681 aa13.27□□□□□ -0.29
LSP1P3-201ENST00000449530 IFT122Q9HBG6 1241 aa13.27□□□□□ -0.29
LSP1P3-201ENST00000449530 TMEM161AQ9NX61 479 aa13.27□□□□□ -0.29
LSP1P3-201ENST00000449530 DBR1Q9UK59 544 aaKnown RBP13.27□□□□□ -0.29
LSP1P3-201ENST00000449530 PIN4Q9Y237 131 aaKnown RBP13.27□□□□□ -0.29
LSP1P3-201ENST00000449530 MTCH2Q9Y6C9 303 aa13.27□□□□□ -0.29
LSP1P3-201ENST00000449530 MRPL42Q9Y6G3 142 aaKnown RBP13.27□□□□□ -0.29
LSP1P3-201ENST00000449530 VWA3AA6NCI4 1184 aa13.26□□□□□ -0.29
LSP1P3-201ENST00000449530 TBKBP1A7MCY6 615 aa13.26□□□□□ -0.29
LSP1P3-201ENST00000449530 FGFR1P11362 822 aa13.26□□□□□ -0.29
LSP1P3-201ENST00000449530 XRCC6P12956 609 aaKnown RBP eCLIP13.26□□□□□ -0.29
LSP1P3-201ENST00000449530 SYT1P21579 422 aa13.26□□□□□ -0.29
LSP1P3-201ENST00000449530 CDC25AP30304 524 aa13.26□□□□□ -0.29
LSP1P3-201ENST00000449530 PHKA2P46019 1235 aa13.26□□□□□ -0.29
LSP1P3-201ENST00000449530 CAPSQ13938 189 aa13.26□□□□□ -0.29
LSP1P3-201ENST00000449530 TFDP1Q14186 410 aa13.26□□□□□ -0.29
LSP1P3-201ENST00000449530 ECM1Q16610 540 aa13.26□□□□□ -0.29
LSP1P3-201ENST00000449530 KRT79Q5XKE5 535 aa13.26□□□□□ -0.29
LSP1P3-201ENST00000449530 TWF2Q6IBS0 349 aaKnown RBP13.26□□□□□ -0.29
LSP1P3-201ENST00000449530 PADI6Q6TGC4 694 aa13.26□□□□□ -0.29
LSP1P3-201ENST00000449530 INO80BQ9C086 356 aaPredicted RBP13.26□□□□□ -0.29
LSP1P3-201ENST00000449530 MINDY3Q9H8M7 445 aa13.26□□□□□ -0.29
LSP1P3-201ENST00000449530 GPRC5CQ9NQ84 441 aa13.26□□□□□ -0.29
LSP1P3-201ENST00000449530 DDX19AQ9NUU7 478 aaKnown RBP13.26□□□□□ -0.29
LSP1P3-201ENST00000449530 RNF216Q9NWF9 866 aaPredicted RBP13.26□□□□□ -0.29
LSP1P3-201ENST00000449530 KIAA1024Q9UPX6 916 aa13.26□□□□□ -0.29
LSP1P3-201ENST00000449530 PLXNA4Q9HCM2 1894 aa13.25□□□□□ -0.29
LSP1P3-201ENST00000449530 ERLIN2O94905 339 aa13.25□□□□□ -0.29
LSP1P3-201ENST00000449530 LINC00271P0C7V0 271 aa13.25□□□□□ -0.29
LSP1P3-201ENST00000449530 MUTP22033 750 aa13.25□□□□□ -0.29
LSP1P3-201ENST00000449530 GLRA2P23416 452 aa13.25□□□□□ -0.29
LSP1P3-201ENST00000449530 RESTQ13127 1097 aa13.25□□□□□ -0.29
LSP1P3-201ENST00000449530 GPM6BQ13491 265 aa13.25□□□□□ -0.29
LSP1P3-201ENST00000449530 PDIA5Q14554 519 aa13.25□□□□□ -0.29
LSP1P3-201ENST00000449530 MXD4Q14582 209 aaPredicted RBP13.25□□□□□ -0.29
LSP1P3-201ENST00000449530 ZRSR1Q15695 479 aaKnown RBP13.25□□□□□ -0.29
LSP1P3-201ENST00000449530 FAM102BQ5T8I3 360 aa13.25□□□□□ -0.29
LSP1P3-201ENST00000449530 SRGAP1Q7Z6B7 1085 aa13.25□□□□□ -0.29
LSP1P3-201ENST00000449530 ECHDC2Q86YB7 292 aa13.25□□□□□ -0.29
LSP1P3-201ENST00000449530 MCPH1Q8NEM0 835 aa13.25□□□□□ -0.29
LSP1P3-201ENST00000449530 ADAMTS19Q8TE59 1207 aa13.25□□□□□ -0.29
LSP1P3-201ENST00000449530 ASB2Q96Q27 587 aa13.25□□□□□ -0.29
LSP1P3-201ENST00000449530 BHMT2Q9H2M3 363 aa13.25□□□□□ -0.29
LSP1P3-201ENST00000449530 AGPAT5Q9NUQ2 364 aa13.25□□□□□ -0.29
LSP1P3-201ENST00000449530 DACT1Q9NYF0 836 aa13.25□□□□□ -0.29
LSP1P3-201ENST00000449530 RWDD3Q9Y3V2 267 aa13.25□□□□□ -0.29
LSP1P3-201ENST00000449530 STK24Q9Y6E0 443 aa13.25□□□□□ -0.29
LSP1P3-201ENST00000449530 LRRIQ4A6NIV6 560 aa13.24□□□□□ -0.29
LSP1P3-201ENST00000449530 INO80B-WBP1J3KQ70 363 aa13.24□□□□□ -0.29
LSP1P3-201ENST00000449530 ASAP2O43150 1006 aa13.24□□□□□ -0.29
LSP1P3-201ENST00000449530 CSPG5O95196 566 aa13.24□□□□□ -0.29
LSP1P3-201ENST00000449530 HSP90AA1P07900 732 aaKnown RBP13.24□□□□□ -0.29
LSP1P3-201ENST00000449530 ATF7P17544 494 aaPredicted RBP13.24□□□□□ -0.29
LSP1P3-201ENST00000449530 ARL2P36404 184 aa13.24□□□□□ -0.29
LSP1P3-201ENST00000449530 PTENP60484 403 aa13.24□□□□□ -0.29
LSP1P3-201ENST00000449530 FAM189BP81408 668 aa13.24□□□□□ -0.29
LSP1P3-201ENST00000449530 SF3A1Q15459 793 aaKnown RBP13.24□□□□□ -0.29
LSP1P3-201ENST00000449530 ARL6IP4Q66PJ3 421 aaKnown RBP13.24□□□□□ -0.29
LSP1P3-201ENST00000449530 CLP1Q92989 425 aaKnown RBP13.24□□□□□ -0.29
LSP1P3-201ENST00000449530 UHRF1Q96T88 793 aaPredicted RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms