RNA–Protein interactions for RNA: ENST00000449502.5

RFC4-210, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-210ENST00000449502 PPFIA1Q13136 1202 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 MYBPC2Q14324 1141 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 MXD4Q14582 209 aaPredicted RBP10.63□□□□□ -0.71
RFC4-210ENST00000449502 NR1I3Q14994 352 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 TARBP2Q15633 366 aaKnown RBP10.63□□□□□ -0.71
RFC4-210ENST00000449502 MAN2A1Q16706 1144 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 VWA3BQ502W6 1294 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 ZCWPW2Q504Y3 356 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 SPECC1LQ69YQ0 1117 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 KSR1Q8IVT5 923 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 VSTM4Q8IW00 320 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 KATNAL1Q9BW62 490 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 CFHR5Q9BXR6 569 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 C2orf40Q9H1Z8 148 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 TUT1Q9H6E5 874 aaKnown RBP10.63□□□□□ -0.71
RFC4-210ENST00000449502 XPNPEP1Q9NQW7 623 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 PDLIM7Q9NR12 457 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 SUCLA2Q9P2R7 463 aaPredicted RBP10.63□□□□□ -0.71
RFC4-210ENST00000449502 ARMCX3Q9UH62 379 aaPredicted RBP10.63□□□□□ -0.71
RFC4-210ENST00000449502 TBX20Q9UMR3 447 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 GABRQQ9UN88 632 aa10.63□□□□□ -0.71
RFC4-210ENST00000449502 GNEQ9Y223 722 aaKnown RBP10.63□□□□□ -0.71
RFC4-210ENST00000449502 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.63□□□□□ -0.71
RFC4-210ENST00000449502 RRN3P2A6NIE6 340 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 K7ERI5 159 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 GPR25O00155 361 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 ASAP2O43150 1006 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 RARBP10826 455 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 KRT13P13646 458 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 INSRRP14616 1297 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 PTGS1P23219 599 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 SFPQP23246 707 aaKnown RBP eCLIP10.62□□□□□ -0.71
RFC4-210ENST00000449502 CTGFP29279 349 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 LIG4P49917 911 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 CYP2J2P51589 502 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 SOX10P56693 466 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 PPP2R3AQ06190 1150 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 TRIM14Q14142 442 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 NFIL3Q16649 462 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 TMEM132AQ24JP5 1023 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 TSR1Q2NL82 804 aaKnown RBP10.62□□□□□ -0.71
RFC4-210ENST00000449502 EFCAB12Q6NXP0 572 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 ARMCX5Q6P1M9 558 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 LRRC55Q6ZSA7 311 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 FRMD5Q7Z6J6 570 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 IRF2BP1Q8IU81 584 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 TMEM161BQ8NDZ6 487 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 CD99L2Q8TCZ2 262 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 ASAP3Q8TDY4 903 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 SCLT1Q96NL6 688 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 FIZ1Q96SL8 496 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 MAP7D2Q96T17 732 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 NTPCRQ9BSD7 190 aaKnown RBP10.62□□□□□ -0.71
RFC4-210ENST00000449502 KIFC3Q9BVG8 833 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 RNPEPQ9H4A4 650 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 AGPAT3Q9NRZ7 376 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 SRRDQ9UH36 339 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 COL1A2P08123 1366 aa10.62□□□□□ -0.71
RFC4-210ENST00000449502 A6NJR5 290 aa10.61□□□□□ -0.71
RFC4-210ENST00000449502 TGFB1I1O43294 461 aa10.61□□□□□ -0.71
RFC4-210ENST00000449502 DUSP11O75319 330 aaKnown RBP10.61□□□□□ -0.71
RFC4-210ENST00000449502 PPP1R37O75864 691 aa10.61□□□□□ -0.71
RFC4-210ENST00000449502 SRGAP2CP0DJJ0 459 aa10.61□□□□□ -0.71
RFC4-210ENST00000449502 GLRA2P23416 452 aa10.61□□□□□ -0.71
RFC4-210ENST00000449502 MATR3P43243 847 aaKnown RBP eCLIP10.61□□□□□ -0.71
RFC4-210ENST00000449502 EFNA5P52803 228 aa10.61□□□□□ -0.71
RFC4-210ENST00000449502 KCNA1Q09470 495 aa10.61□□□□□ -0.71
RFC4-210ENST00000449502 GRIK4Q16099 956 aa10.61□□□□□ -0.71
RFC4-210ENST00000449502 FSCN1Q16658 493 aaKnown RBP10.61□□□□□ -0.71
RFC4-210ENST00000449502 USP37Q86T82 979 aa10.61□□□□□ -0.71
RFC4-210ENST00000449502 MAP4K3Q8IVH8 894 aa10.61□□□□□ -0.71
RFC4-210ENST00000449502 FAM186BQ8IYM0 893 aa10.61□□□□□ -0.71
RFC4-210ENST00000449502 LRRC71Q8N4P6 559 aa10.61□□□□□ -0.71
RFC4-210ENST00000449502 PRPF31Q8WWY3 499 aaKnown RBP10.61□□□□□ -0.71
RFC4-210ENST00000449502 BSNDQ8WZ55 320 aa10.61□□□□□ -0.71
RFC4-210ENST00000449502 TRIB2Q92519 343 aa10.61□□□□□ -0.71
RFC4-210ENST00000449502 C16orf70Q9BSU1 422 aa10.61□□□□□ -0.71
RFC4-210ENST00000449502 MKNK1Q9BUB5 465 aa10.61□□□□□ -0.71
RFC4-210ENST00000449502 NUP58Q9BVL2 599 aa10.61□□□□□ -0.71
RFC4-210ENST00000449502 STRA6Q9BX79 667 aa10.61□□□□□ -0.71
RFC4-210ENST00000449502 NDST4Q9H3R1 872 aa10.61□□□□□ -0.71
RFC4-210ENST00000449502 SAGE1Q9NXZ1 904 aa10.61□□□□□ -0.71
RFC4-210ENST00000449502 AKT3Q9Y243 479 aa10.61□□□□□ -0.71
RFC4-210ENST00000449502 ITIH6Q6UXX5 1313 aa10.6□□□□□ -0.71
RFC4-210ENST00000449502 A0A1W2PQC6 194 aa10.6□□□□□ -0.71
RFC4-210ENST00000449502 AKR1B15C9JRZ8 316 aaPredicted RBP10.6□□□□□ -0.71
RFC4-210ENST00000449502 HNRNPDLO14979 420 aaKnown RBP10.6□□□□□ -0.71
RFC4-210ENST00000449502 SEPT4O43236 478 aa10.6□□□□□ -0.71
RFC4-210ENST00000449502 TEX33O43247 280 aa10.6□□□□□ -0.71
RFC4-210ENST00000449502 ADCY3O60266 1144 aa10.6□□□□□ -0.71
RFC4-210ENST00000449502 MYCNP04198 464 aaPredicted RBP10.6□□□□□ -0.71
RFC4-210ENST00000449502 C6orf222P0C671 652 aaPredicted RBP10.6□□□□□ -0.71
RFC4-210ENST00000449502 GNAT1P11488 350 aa10.6□□□□□ -0.71
RFC4-210ENST00000449502 HOXD8P13378 290 aaPredicted RBP10.6□□□□□ -0.71
RFC4-210ENST00000449502 KLRC1P26715 233 aa10.6□□□□□ -0.71
RFC4-210ENST00000449502 HOXD13P35453 343 aa10.6□□□□□ -0.71
RFC4-210ENST00000449502 PSEN2P49810 448 aa10.6□□□□□ -0.71
RFC4-210ENST00000449502 PRMT2P55345 433 aa10.6□□□□□ -0.71
RFC4-210ENST00000449502 HTRA3P83110 453 aa10.6□□□□□ -0.71
RFC4-210ENST00000449502 MAP2K1Q02750 393 aaPredicted RBP10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms