RNA–Protein interactions for RNA: ENST00000446231.6

SMG1-202, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG1, Length 16,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-202ENST00000446231 RANBP17Q9H2T7 1088 aaKnown RBP8.4□□□□□ -1.06
SMG1-202ENST00000446231 AP4S1Q9Y587 144 aa8.4□□□□□ -1.06
SMG1-202ENST00000446231 MX2P20592 715 aa8.4□□□□□ -1.07
SMG1-202ENST00000446231 TRIM59Q8IWR1 403 aa8.4□□□□□ -1.07
SMG1-202ENST00000446231 STK32AQ8WU08 396 aa8.4□□□□□ -1.07
SMG1-202ENST00000446231 TRIM11Q96F44 468 aa8.4□□□□□ -1.07
SMG1-202ENST00000446231 MYO10Q9HD67 2058 aa8.4□□□□□ -1.07
SMG1-202ENST00000446231 XPO1O14980 1071 aaKnown RBP8.4□□□□□ -1.07
SMG1-202ENST00000446231 HSPA8P11142 646 aaKnown RBP8.4□□□□□ -1.07
SMG1-202ENST00000446231 PDS5AQ29RF7 1337 aaKnown RBP8.4□□□□□ -1.07
SMG1-202ENST00000446231 NUMA1Q14980 2115 aa8.4□□□□□ -1.07
SMG1-202ENST00000446231 LONRF1Q17RB8 773 aa8.4□□□□□ -1.07
SMG1-202ENST00000446231 FAM178BQ8IXR5 827 aa8.4□□□□□ -1.07
SMG1-202ENST00000446231 CASP10Q92851 521 aa8.4□□□□□ -1.07
SMG1-202ENST00000446231 EMILIN3Q9NT22 766 aa8.4□□□□□ -1.07
SMG1-202ENST00000446231 PCDH11YQ9BZA8 1340 aa8.4□□□□□ -1.07
SMG1-202ENST00000446231 ITGA4P13612 1032 aa8.4□□□□□ -1.07
SMG1-202ENST00000446231 KYNUQ16719 465 aa8.4□□□□□ -1.07
SMG1-202ENST00000446231 SDCCAG3Q96C92 435 aa8.4□□□□□ -1.07
SMG1-202ENST00000446231 NINQ8N4C6 2090 aa8.4□□□□□ -1.07
SMG1-202ENST00000446231 KRT37O76014 449 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 PHKA1P46020 1223 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 SARSP49591 514 aaKnown RBP8.39□□□□□ -1.07
SMG1-202ENST00000446231 DRAP1Q14919 205 aaPredicted RBP8.39□□□□□ -1.07
SMG1-202ENST00000446231 SLC35G2Q8TBE7 412 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 CCDC127Q96BQ5 260 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 PPCSQ9HAB8 311 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 HMGXB3Q12766 1538 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 JADE1Q6IE81 842 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 PPP4R3CPQ6ZMV5 832 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 CYB5R4Q7L1T6 521 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 DDHD1Q8NEL9 900 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.39□□□□□ -1.07
SMG1-202ENST00000446231 LARP4BQ92615 738 aaKnown RBP8.39□□□□□ -1.07
SMG1-202ENST00000446231 ZNF184Q99676 751 aaPredicted RBP8.39□□□□□ -1.07
SMG1-202ENST00000446231 ERMARDQ5T6L9 678 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 SPICE1Q8N0Z3 855 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 SPC25Q9HBM1 224 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 COMMD10Q9Y6G5 202 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 RFX7Q2KHR2 1363 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 KLRF2D3W0D1 207 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 DAB1O75553 588 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 NLRP3Q96P20 1036 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 TRIM33Q9UPN9 1127 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 CACNA1CQ13936 2221 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 PHF2O75151 1096 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 ERVK-9P63128 1117 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 KCNV1Q6PIU1 500 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 SH3GL2Q99962 352 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 TRIM15Q9C019 465 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 MANSC1Q9H8J5 431 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 DNAJC12Q9UKB3 198 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 GOLGA8QA0A0J9YX86 632 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 GOLGA8OA6NCC3 632 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 GOLGA8NF8WBI6 632 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 KLHL2O95198 593 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 ATP2C1P98194 919 aaPredicted RBP8.39□□□□□ -1.07
SMG1-202ENST00000446231 CCDC137Q6PK04 289 aaKnown RBP8.39□□□□□ -1.07
SMG1-202ENST00000446231 OSBPL8Q9BZF1 889 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 GPC4O75487 556 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 KITP10721 976 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 NR1H4Q96RI1 486 aaPredicted RBP8.39□□□□□ -1.07
SMG1-202ENST00000446231 KLHL4Q9C0H6 718 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 ABCC1P33527 1531 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 IQCA1LA6NCM1 817 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 PIH1D3Q9NQM4 214 aaKnown RBP8.39□□□□□ -1.07
SMG1-202ENST00000446231 ERFP50548 548 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 SERPINB12Q96P63 405 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 PCDHB4Q9Y5E5 795 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 GOLGA8SH3BPF8 625 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 GOLGA8MH3BSY2 632 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 MYOM2P54296 1465 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 ST3GAL1Q11201 340 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 PRPF39Q86UA1 669 aaKnown RBP8.39□□□□□ -1.07
SMG1-202ENST00000446231 PRPF31Q8WWY3 499 aaKnown RBP8.39□□□□□ -1.07
SMG1-202ENST00000446231 CELF4Q9BZC1 486 aaKnown RBP8.39□□□□□ -1.07
SMG1-202ENST00000446231 PKD2L1Q9P0L9 805 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 GIMAP8Q8ND71 665 aaPredicted RBP8.39□□□□□ -1.07
SMG1-202ENST00000446231 THTPAQ9BU02 230 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 CCSER1Q9C0I3 900 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 ARHGEF9O43307 516 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 CDH16O75309 829 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 PLEKHA8P1O95397 391 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 FCER1AP12319 257 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 MXD3Q9BW11 206 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 TSSK1BQ9BXA7 367 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 HNRNPRO43390 633 aaKnown RBP8.39□□□□□ -1.07
SMG1-202ENST00000446231 CBX6O95503 412 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 APOA1P02647 267 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 KLHL38Q2WGJ6 581 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 TRIM9Q9C026 710 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 C1orf112Q9NSG2 853 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 ADAM22Q9P0K1 906 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 CLASP1Q7Z460 1538 aa8.39□□□□□ -1.07
SMG1-202ENST00000446231 OSCARQ8IYS5 282 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 SENP1Q9P0U3 644 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 DPPA5A6NC42 116 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 FESP07332 822 aa8.38□□□□□ -1.07
SMG1-202ENST00000446231 CHRM1P11229 460 aaPredicted RBP8.38□□□□□ -1.07
SMG1-202ENST00000446231 SLC18A3Q16572 532 aa8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms