RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 PSMA7O14818 248 aa11.02□□□□□ -0.64
CBX5-202ENST00000439541 GLRA2P23416 452 aa11.02□□□□□ -0.64
CBX5-202ENST00000439541 NPTX2P47972 431 aa11.02□□□□□ -0.64
CBX5-202ENST00000439541 LBX1P52954 281 aa11.02□□□□□ -0.64
CBX5-202ENST00000439541 PSMD2Q13200 908 aa11.02□□□□□ -0.64
CBX5-202ENST00000439541 SYCP1Q15431 976 aa11.02□□□□□ -0.64
CBX5-202ENST00000439541 SLC9C1Q4G0N8 1177 aa11.02□□□□□ -0.64
CBX5-202ENST00000439541 BRDTQ58F21 947 aaPredicted RBP11.02□□□□□ -0.64
CBX5-202ENST00000439541 MARCH8Q5T0T0 291 aa11.02□□□□□ -0.64
CBX5-202ENST00000439541 C17orf53Q8N3J3 647 aaPredicted RBP11.02□□□□□ -0.64
CBX5-202ENST00000439541 METTL13Q8N6R0 699 aa11.02□□□□□ -0.64
CBX5-202ENST00000439541 KIFAP3Q92845 792 aa11.02□□□□□ -0.64
CBX5-202ENST00000439541 TIPINQ9BVW5 301 aa11.02□□□□□ -0.64
CBX5-202ENST00000439541 XRN2Q9H0D6 950 aaKnown RBP eCLIP11.02□□□□□ -0.64
CBX5-202ENST00000439541 HMX1Q9NP08 348 aaPredicted RBP11.02□□□□□ -0.64
CBX5-202ENST00000439541 NFE2L3Q9Y4A8 694 aa11.02□□□□□ -0.64
CBX5-202ENST00000439541 IGKV6-21A0A0C4DH24 114 aa11.02□□□□□ -0.65
CBX5-202ENST00000439541 HAS3O00219 553 aa11.02□□□□□ -0.65
CBX5-202ENST00000439541 ATP1A3P13637 1013 aa11.02□□□□□ -0.65
CBX5-202ENST00000439541 KLRC1P26715 233 aa11.02□□□□□ -0.65
CBX5-202ENST00000439541 ERCC5P28715 1186 aaPredicted RBP11.02□□□□□ -0.65
CBX5-202ENST00000439541 ARL2P36404 184 aa11.02□□□□□ -0.65
CBX5-202ENST00000439541 ZNF200P98182 395 aaPredicted RBP11.02□□□□□ -0.65
CBX5-202ENST00000439541 DMP1Q13316 513 aaPredicted RBP11.02□□□□□ -0.65
CBX5-202ENST00000439541 STIM1Q13586 685 aa11.02□□□□□ -0.65
CBX5-202ENST00000439541 CAPSQ13938 189 aa11.02□□□□□ -0.65
CBX5-202ENST00000439541 LHX8Q68G74 356 aa11.02□□□□□ -0.65
CBX5-202ENST00000439541 ANKRD40Q6AI12 368 aa11.02□□□□□ -0.65
CBX5-202ENST00000439541 TTI2Q6NXR4 508 aa11.02□□□□□ -0.65
CBX5-202ENST00000439541 GUF1Q8N442 669 aaKnown RBP11.02□□□□□ -0.65
CBX5-202ENST00000439541 P2RX5Q93086 422 aa11.02□□□□□ -0.65
CBX5-202ENST00000439541 SPC25Q9HBM1 224 aa11.02□□□□□ -0.65
CBX5-202ENST00000439541 FANCLQ9NW38 375 aa11.02□□□□□ -0.65
CBX5-202ENST00000439541 LARSQ9P2J5 1176 aaKnown RBP11.02□□□□□ -0.65
CBX5-202ENST00000439541 SEL1LQ9UBV2 794 aa11.02□□□□□ -0.65
CBX5-202ENST00000439541 RWDD2AQ9UIY3 292 aa11.02□□□□□ -0.65
CBX5-202ENST00000439541 DNAH12Q6ZR08 3092 aa11.02□□□□□ -0.65
CBX5-202ENST00000439541 COL1A2P08123 1366 aa11.01□□□□□ -0.65
CBX5-202ENST00000439541 LRRIQ4A6NIV6 560 aa11.01□□□□□ -0.65
CBX5-202ENST00000439541 TISP43B9A030 160 aa11.01□□□□□ -0.65
CBX5-202ENST00000439541 CTIFO43310 598 aaKnown RBP11.01□□□□□ -0.65
CBX5-202ENST00000439541 PPP1R37O75864 691 aa11.01□□□□□ -0.65
CBX5-202ENST00000439541 ASGR1P07306 291 aa11.01□□□□□ -0.65
CBX5-202ENST00000439541 NCKAP1LP55160 1127 aa11.01□□□□□ -0.65
CBX5-202ENST00000439541 KCNA10Q16322 511 aa11.01□□□□□ -0.65
CBX5-202ENST00000439541 COBLL1Q53SF7 1204 aa11.01□□□□□ -0.65
CBX5-202ENST00000439541 ZNF484Q5JVG2 852 aa11.01□□□□□ -0.65
CBX5-202ENST00000439541 CCSAPQ6IQ19 270 aaPredicted RBP11.01□□□□□ -0.65
CBX5-202ENST00000439541 EFCAB12Q6NXP0 572 aa11.01□□□□□ -0.65
CBX5-202ENST00000439541 MTHFD1LQ6UB35 978 aa11.01□□□□□ -0.65
CBX5-202ENST00000439541 ZNF720Q7Z2F6 126 aa11.01□□□□□ -0.65
CBX5-202ENST00000439541 KLHDC9Q8NEP7 349 aa11.01□□□□□ -0.65
CBX5-202ENST00000439541 ENOX1Q8TC92 643 aaKnown RBP11.01□□□□□ -0.65
CBX5-202ENST00000439541 DUSP9Q99956 384 aaKnown RBP11.01□□□□□ -0.65
CBX5-202ENST00000439541 ZMYND15Q9H091 742 aa11.01□□□□□ -0.65
CBX5-202ENST00000439541 KCTD10Q9H3F6 313 aa11.01□□□□□ -0.65
CBX5-202ENST00000439541 KMT5AQ9NQR1 393 aa11.01□□□□□ -0.65
CBX5-202ENST00000439541 SAMSN1Q9NSI8 373 aaKnown RBP11.01□□□□□ -0.65
CBX5-202ENST00000439541 HDAC6Q9UBN7 1215 aa11.01□□□□□ -0.65
CBX5-202ENST00000439541 SMTNL1A8MU46 457 aa11□□□□□ -0.65
CBX5-202ENST00000439541 IKBKBO14920 756 aa11□□□□□ -0.65
CBX5-202ENST00000439541 CCNE1P24864 410 aa11□□□□□ -0.65
CBX5-202ENST00000439541 NKX3-2P78367 333 aa11□□□□□ -0.65
CBX5-202ENST00000439541 ZCWPW2Q504Y3 356 aa11□□□□□ -0.65
CBX5-202ENST00000439541 RUFY4Q6ZNE9 571 aa11□□□□□ -0.65
CBX5-202ENST00000439541 HAUS6Q7Z4H7 955 aa11□□□□□ -0.65
CBX5-202ENST00000439541 RHPN2Q8IUC4 686 aa11□□□□□ -0.65
CBX5-202ENST00000439541 LINC01465Q8N7H1 131 aa11□□□□□ -0.65
CBX5-202ENST00000439541 TMEM161BQ8NDZ6 487 aa11□□□□□ -0.65
CBX5-202ENST00000439541 PRPF31Q8WWY3 499 aaKnown RBP11□□□□□ -0.65
CBX5-202ENST00000439541 DHTKD1Q96HY7 919 aaPredicted RBP11□□□□□ -0.65
CBX5-202ENST00000439541 NLRP4Q96MN2 994 aa11□□□□□ -0.65
CBX5-202ENST00000439541 MTG1Q9BT17 334 aaPredicted RBP11□□□□□ -0.65
CBX5-202ENST00000439541 STRA6Q9BX79 667 aa11□□□□□ -0.65
CBX5-202ENST00000439541 SUCLA2Q9P2R7 463 aaPredicted RBP11□□□□□ -0.65
CBX5-202ENST00000439541 USP20Q9Y2K6 914 aa11□□□□□ -0.65
CBX5-202ENST00000439541 DENND3A2RUS2 1198 aa11□□□□□ -0.65
CBX5-202ENST00000439541 RIOK3O14730 519 aaKnown RBP11□□□□□ -0.65
CBX5-202ENST00000439541 EIF3DO15371 548 aaKnown RBP eCLIP11□□□□□ -0.65
CBX5-202ENST00000439541 VTNP04004 478 aa11□□□□□ -0.65
CBX5-202ENST00000439541 EDN1P05305 212 aa11□□□□□ -0.65
CBX5-202ENST00000439541 CST5P28325 142 aaPredicted RBP11□□□□□ -0.65
CBX5-202ENST00000439541 TMEM62Q0P6H9 643 aa11□□□□□ -0.65
CBX5-202ENST00000439541 LAMTOR4Q0VGL1 99 aa11□□□□□ -0.65
CBX5-202ENST00000439541 BMT2Q1RMZ1 405 aa11□□□□□ -0.65
CBX5-202ENST00000439541 NBPF20Q3BBV1 942 aa11□□□□□ -0.65
CBX5-202ENST00000439541 FAM47CQ5HY64 1035 aa11□□□□□ -0.65
CBX5-202ENST00000439541 SPATA1Q5VX52 437 aa11□□□□□ -0.65
CBX5-202ENST00000439541 CENPPQ6IPU0 288 aa11□□□□□ -0.65
CBX5-202ENST00000439541 NFRKBQ6P4R8 1299 aa11□□□□□ -0.65
CBX5-202ENST00000439541 TAS1R3Q7RTX0 852 aa11□□□□□ -0.65
CBX5-202ENST00000439541 CTU1Q7Z7A3 348 aaKnown RBP11□□□□□ -0.65
CBX5-202ENST00000439541 PSPC1Q8WXF1 523 aaKnown RBP11□□□□□ -0.65
CBX5-202ENST00000439541 IFT74Q96LB3 600 aa11□□□□□ -0.65
CBX5-202ENST00000439541 KATNAL1Q9BW62 490 aa11□□□□□ -0.65
CBX5-202ENST00000439541 FAM49AQ9H0Q0 323 aaPredicted RBP11□□□□□ -0.65
CBX5-202ENST00000439541 PPME1Q9Y570 386 aa11□□□□□ -0.65
CBX5-202ENST00000439541 SCN10AQ9Y5Y9 1956 aa11□□□□□ -0.65
CBX5-202ENST00000439541 SIP14410 1827 aa10.99□□□□□ -0.65
CBX5-202ENST00000439541 GRIN2DO15399 1336 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms