RNA–Protein interactions for RNA: ENST00000427563.1

COL9A2-204, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-204ENST00000427563 GJB2P29033 226 aa21.39■■□□□ 1.01
COL9A2-204ENST00000427563 TRAPPC10P48553 1259 aa21.39■■□□□ 1.01
COL9A2-204ENST00000427563 RARRES1P49788 294 aa21.39■■□□□ 1.01
COL9A2-204ENST00000427563 MRPS5P82675 430 aaKnown RBP21.39■■□□□ 1.01
COL9A2-204ENST00000427563 CDC42EP1Q00587 391 aa21.39■■□□□ 1.01
COL9A2-204ENST00000427563 LAMTOR4Q0VGL1 99 aa21.39■■□□□ 1.01
COL9A2-204ENST00000427563 ORC2Q13416 577 aaPredicted RBP21.39■■□□□ 1.01
COL9A2-204ENST00000427563 LRRC55Q6ZSA7 311 aa21.39■■□□□ 1.01
COL9A2-204ENST00000427563 OTUD6AQ7L8S5 288 aa21.39■■□□□ 1.01
COL9A2-204ENST00000427563 CATSPER3Q86XQ3 398 aa21.39■■□□□ 1.01
COL9A2-204ENST00000427563 CASD1Q96PB1 797 aa21.39■■□□□ 1.01
COL9A2-204ENST00000427563 CWH43Q9H720 699 aa21.39■■□□□ 1.01
COL9A2-204ENST00000427563 ALG13Q9NP73 1137 aaKnown RBP21.39■■□□□ 1.01
COL9A2-204ENST00000427563 ANKEF1Q9NU02 776 aa21.39■■□□□ 1.01
COL9A2-204ENST00000427563 PLAGL2Q9UPG8 496 aa21.39■■□□□ 1.01
COL9A2-204ENST00000427563 RWDD3Q9Y3V2 267 aa21.39■■□□□ 1.01
COL9A2-204ENST00000427563 ITGB1P05556 798 aa21.38■■□□□ 1.01
COL9A2-204ENST00000427563 KCNQ1P51787 676 aa21.38■■□□□ 1.01
COL9A2-204ENST00000427563 CLLU1OSQ5K130 101 aa21.38■■□□□ 1.01
COL9A2-204ENST00000427563 FERMT3Q86UX7 667 aa21.38■■□□□ 1.01
COL9A2-204ENST00000427563 IL27Q8NEV9 243 aa21.38■■□□□ 1.01
COL9A2-204ENST00000427563 PSPC1Q8WXF1 523 aaKnown RBP21.38■■□□□ 1.01
COL9A2-204ENST00000427563 MTRQ99707 1265 aa21.38■■□□□ 1.01
COL9A2-204ENST00000427563 C11orf84Q9BUA3 381 aaPredicted RBP21.38■■□□□ 1.01
COL9A2-204ENST00000427563 ATP6V0A4Q9HBG4 840 aa21.38■■□□□ 1.01
COL9A2-204ENST00000427563 TYW1Q9NV66 732 aaKnown RBP21.38■■□□□ 1.01
COL9A2-204ENST00000427563 TTC28Q96AY4 2481 aa21.38■■□□□ 1.01
COL9A2-204ENST00000427563 A0A0U1RQF3 1178 aa21.37■■□□□ 1.01
COL9A2-204ENST00000427563 SRGAP2CP0DJJ0 459 aa21.37■■□□□ 1.01
COL9A2-204ENST00000427563 BMP1P13497 986 aa21.37■■□□□ 1.01
COL9A2-204ENST00000427563 ZSCAN20P17040 1043 aaPredicted RBP21.37■■□□□ 1.01
COL9A2-204ENST00000427563 IL17AQ16552 155 aa21.37■■□□□ 1.01
COL9A2-204ENST00000427563 ECM1Q16610 540 aa21.37■■□□□ 1.01
COL9A2-204ENST00000427563 TCEAL5Q5H9L2 206 aa21.37■■□□□ 1.01
COL9A2-204ENST00000427563 KLHL23Q8NBE8 558 aa21.37■■□□□ 1.01
COL9A2-204ENST00000427563 SPPL3Q8TCT6 385 aa21.37■■□□□ 1.01
COL9A2-204ENST00000427563 ASAP3Q8TDY4 903 aa21.37■■□□□ 1.01
COL9A2-204ENST00000427563 P2RX5Q93086 422 aa21.37■■□□□ 1.01
COL9A2-204ENST00000427563 POLR3CQ9BUI4 534 aaPredicted RBP21.37■■□□□ 1.01
COL9A2-204ENST00000427563 PLVAPQ9BX97 442 aa21.37■■□□□ 1.01
COL9A2-204ENST00000427563 TUFT1Q9NNX1 390 aa21.37■■□□□ 1.01
COL9A2-204ENST00000427563 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP21.36■■□□□ 1.01
COL9A2-204ENST00000427563 MEIS3P2A8K0S8 358 aa21.36■■□□□ 1.01
COL9A2-204ENST00000427563 GAS2O43903 313 aaKnown RBP21.36■■□□□ 1.01
COL9A2-204ENST00000427563 MCM2P49736 904 aa21.36■■□□□ 1.01
COL9A2-204ENST00000427563 GNL2Q13823 731 aaKnown RBP21.36■■□□□ 1.01
COL9A2-204ENST00000427563 PTPROQ16827 1216 aa21.36■■□□□ 1.01
COL9A2-204ENST00000427563 POTEGQ6S5H5 508 aa21.36■■□□□ 1.01
COL9A2-204ENST00000427563 HLA-CQ95604 372 aa21.36■■□□□ 1.01
COL9A2-204ENST00000427563 TRAIPQ9BWF2 469 aa21.36■■□□□ 1.01
COL9A2-204ENST00000427563 COG5Q9UP83 839 aa21.36■■□□□ 1.01
COL9A2-204ENST00000427563 CSPG5O95196 566 aa21.35■■□□□ 1.01
COL9A2-204ENST00000427563 SFPQP23246 707 aaKnown RBP eCLIP21.35■■□□□ 1.01
COL9A2-204ENST00000427563 HOXA11P31270 313 aaPredicted RBP21.35■■□□□ 1.01
COL9A2-204ENST00000427563 ARL2P36404 184 aa21.35■■□□□ 1.01
COL9A2-204ENST00000427563 PHKA2P46019 1235 aa21.35■■□□□ 1.01
COL9A2-204ENST00000427563 FXR2P51116 673 aaKnown RBP eCLIP21.35■■□□□ 1.01
COL9A2-204ENST00000427563 PTGDRQ13258 359 aa21.35■■□□□ 1.01
COL9A2-204ENST00000427563 COL19A1Q14993 1142 aa21.35■■□□□ 1.01
COL9A2-204ENST00000427563 TIGD5Q53EQ6 642 aa21.35■■□□□ 1.01
COL9A2-204ENST00000427563 EXOC8Q8IYI6 725 aa21.35■■□□□ 1.01
COL9A2-204ENST00000427563 RNF149Q8NC42 400 aa21.35■■□□□ 1.01
COL9A2-204ENST00000427563 TCP11Q8WWU5 503 aa21.35■■□□□ 1.01
COL9A2-204ENST00000427563 TMEM117Q9H0C3 514 aa21.35■■□□□ 1.01
COL9A2-204ENST00000427563 LMAN2LQ9H0V9 348 aa21.35■■□□□ 1.01
COL9A2-204ENST00000427563 EIF4ENIF1Q9NRA8 985 aaKnown RBP21.35■■□□□ 1.01
COL9A2-204ENST00000427563 CHST12Q9NRB3 414 aa21.35■■□□□ 1.01
COL9A2-204ENST00000427563 AGPAT5Q9NUQ2 364 aa21.35■■□□□ 1.01
COL9A2-204ENST00000427563 NOL7Q9UMY1 257 aaKnown RBP21.35■■□□□ 1.01
COL9A2-204ENST00000427563 PIN4Q9Y237 131 aaKnown RBP21.35■■□□□ 1.01
COL9A2-204ENST00000427563 DGAT1O75907 488 aa21.34■■□□□ 1.01
COL9A2-204ENST00000427563 XRCC6P12956 609 aaKnown RBP eCLIP21.34■■□□□ 1.01
COL9A2-204ENST00000427563 GLRA2P23416 452 aa21.34■■□□□ 1.01
COL9A2-204ENST00000427563 RPA1P27694 616 aa21.34■■□□□ 1.01
COL9A2-204ENST00000427563 IRS1P35568 1242 aa21.34■■□□□ 1.01
COL9A2-204ENST00000427563 CUL4AQ13619 759 aa21.34■■□□□ 1.01
COL9A2-204ENST00000427563 CAPSQ13938 189 aa21.34■■□□□ 1.01
COL9A2-204ENST00000427563 UBXN11Q5T124 520 aa21.34■■□□□ 1.01
COL9A2-204ENST00000427563 CATSPER4Q7RTX7 472 aa21.34■■□□□ 1.01
COL9A2-204ENST00000427563 SRGAP1Q7Z6B7 1085 aa21.34■■□□□ 1.01
COL9A2-204ENST00000427563 COLGALT1Q8NBJ5 622 aa21.34■■□□□ 1.01
COL9A2-204ENST00000427563 RNF169Q8NCN4 708 aa21.34■■□□□ 1.01
COL9A2-204ENST00000427563 LPPQ93052 612 aa21.34■■□□□ 1.01
COL9A2-204ENST00000427563 INO80BQ9C086 356 aaPredicted RBP21.34■■□□□ 1.01
COL9A2-204ENST00000427563 NSUN3Q9H649 340 aaKnown RBP21.34■■□□□ 1.01
COL9A2-204ENST00000427563 UBE2ZQ9H832 354 aaPredicted RBP21.34■■□□□ 1.01
COL9A2-204ENST00000427563 GPRC5CQ9NQ84 441 aa21.34■■□□□ 1.01
COL9A2-204ENST00000427563 PCDHGC5Q9Y5F6 944 aa21.34■■□□□ 1.01
COL9A2-204ENST00000427563 USO1O60763 962 aaKnown RBP21.33■■□□□ 1.01
COL9A2-204ENST00000427563 EOMESO95936 686 aa21.33■■□□□ 1.01
COL9A2-204ENST00000427563 GTF2F1P35269 517 aaKnown RBP eCLIP21.33■■□□□ 1.01
COL9A2-204ENST00000427563 PTENP60484 403 aa21.33■■□□□ 1.01
COL9A2-204ENST00000427563 NAALADL2Q58DX5 795 aa21.33■■□□□ 1.01
COL9A2-204ENST00000427563 IFNLR1Q8IU57 520 aaPredicted RBP21.33■■□□□ 1.01
COL9A2-204ENST00000427563 IGSF22Q8N9C0 903 aa21.33■■□□□ 1.01
COL9A2-204ENST00000427563 HELQQ8TDG4 1101 aa21.33■■□□□ 1.01
COL9A2-204ENST00000427563 POF1BQ8WVV4 589 aa21.33■■□□□ 1.01
COL9A2-204ENST00000427563 NECAB3Q96P71 396 aaPredicted RBP21.33■■□□□ 1.01
COL9A2-204ENST00000427563 FAM105AQ9NUU6 356 aa21.33■■□□□ 1.01
COL9A2-204ENST00000427563 RNF216Q9NWF9 866 aaPredicted RBP21.33■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms