RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 CAMTA1Q9Y6Y1 1673 aa7.49□□□□□ -1.21
C9orf3-205ENST00000427193 CYR61O00622 381 aa7.49□□□□□ -1.21
C9orf3-205ENST00000427193 FZD7O75084 574 aa7.49□□□□□ -1.21
C9orf3-205ENST00000427193 PTPN1P18031 435 aaKnown RBP7.49□□□□□ -1.21
C9orf3-205ENST00000427193 GJA4P35212 333 aa7.49□□□□□ -1.21
C9orf3-205ENST00000427193 SUMO1P63165 101 aaKnown RBP7.49□□□□□ -1.21
C9orf3-205ENST00000427193 RASGRF1Q13972 1273 aa7.49□□□□□ -1.21
C9orf3-205ENST00000427193 TCTN3Q6NUS6 607 aa7.49□□□□□ -1.21
C9orf3-205ENST00000427193 SPATC1Q76KD6 591 aa7.49□□□□□ -1.21
C9orf3-205ENST00000427193 GNRHR2Q96P88 292 aa7.49□□□□□ -1.21
C9orf3-205ENST00000427193 PUS7Q96PZ0 661 aaKnown RBP7.49□□□□□ -1.21
C9orf3-205ENST00000427193 LRRC37BQ96QE4 947 aa7.49□□□□□ -1.21
C9orf3-205ENST00000427193 CDC6Q99741 560 aa7.49□□□□□ -1.21
C9orf3-205ENST00000427193 IGSF5Q9NSI5 407 aa7.49□□□□□ -1.21
C9orf3-205ENST00000427193 KNDC1Q76NI1 1749 aa7.49□□□□□ -1.21
C9orf3-205ENST00000427193 PLEKHH1Q9ULM0 1364 aa7.48□□□□□ -1.21
C9orf3-205ENST00000427193 FAM83GA6ND36 823 aa7.48□□□□□ -1.21
C9orf3-205ENST00000427193 ADCY3O60266 1144 aa7.48□□□□□ -1.21
C9orf3-205ENST00000427193 ZNF888P0CJ79 500 aaPredicted RBP7.48□□□□□ -1.21
C9orf3-205ENST00000427193 ACVRL1P37023 503 aa7.48□□□□□ -1.21
C9orf3-205ENST00000427193 TOP3AQ13472 1001 aaPredicted RBP7.48□□□□□ -1.21
C9orf3-205ENST00000427193 SPDYAQ5MJ70 313 aa7.48□□□□□ -1.21
C9orf3-205ENST00000427193 ARHGAP36Q6ZRI8 547 aa7.48□□□□□ -1.21
C9orf3-205ENST00000427193 USP51Q70EK9 711 aa7.48□□□□□ -1.21
C9orf3-205ENST00000427193 GIMAP8Q8ND71 665 aaPredicted RBP7.48□□□□□ -1.21
C9orf3-205ENST00000427193 FBXW5Q969U6 566 aa7.48□□□□□ -1.21
C9orf3-205ENST00000427193 NEIL1Q96FI4 390 aaPredicted RBP7.48□□□□□ -1.21
C9orf3-205ENST00000427193 IPO9Q96P70 1041 aaKnown RBP7.48□□□□□ -1.21
C9orf3-205ENST00000427193 SCAND2PQ9GZW5 306 aaPredicted RBP7.48□□□□□ -1.21
C9orf3-205ENST00000427193 RIC8BQ9NVN3 520 aa7.48□□□□□ -1.21
C9orf3-205ENST00000427193 ARHGAP28Q9P2N2 729 aa7.48□□□□□ -1.21
C9orf3-205ENST00000427193 WASHC2AQ641Q2 1341 aa7.48□□□□□ -1.21
C9orf3-205ENST00000427193 PLCH1Q4KWH8 1693 aa7.47□□□□□ -1.21
C9orf3-205ENST00000427193 RREB1Q92766 1687 aa7.47□□□□□ -1.21
C9orf3-205ENST00000427193 ARHGEF28Q8N1W1 1705 aaKnown RBP7.47□□□□□ -1.21
C9orf3-205ENST00000427193 TRBV23-1A0A0A0MS06 115 aa7.47□□□□□ -1.21
C9orf3-205ENST00000427193 FAM90A27PA6NNH2 459 aa7.47□□□□□ -1.21
C9orf3-205ENST00000427193 FOXS1O43638 330 aa7.47□□□□□ -1.21
C9orf3-205ENST00000427193 MTERF2Q49AM1 385 aa7.47□□□□□ -1.21
C9orf3-205ENST00000427193 FIGNQ5HY92 759 aa7.47□□□□□ -1.21
C9orf3-205ENST00000427193 C16orf59Q7L2K0 433 aa7.47□□□□□ -1.21
C9orf3-205ENST00000427193 ZBTB38Q8NAP3 1195 aaPredicted RBP7.47□□□□□ -1.21
C9orf3-205ENST00000427193 CCDC113Q9H0I3 377 aa7.47□□□□□ -1.21
C9orf3-205ENST00000427193 CATSPERZQ9NTU4 200 aa7.47□□□□□ -1.21
C9orf3-205ENST00000427193 ZFR2Q9UPR6 939 aaKnown RBP7.47□□□□□ -1.21
C9orf3-205ENST00000427193 PTPN22Q9Y2R2 807 aa7.47□□□□□ -1.21
C9orf3-205ENST00000427193 ATP23Q9Y6H3 246 aa7.47□□□□□ -1.21
C9orf3-205ENST00000427193 CENPJQ9HC77 1338 aaPredicted RBP7.47□□□□□ -1.21
C9orf3-205ENST00000427193 EIF3AQ14152 1382 aaKnown RBP7.46□□□□□ -1.21
C9orf3-205ENST00000427193 ARVCFO00192 962 aa7.46□□□□□ -1.22
C9orf3-205ENST00000427193 GSTA4O15217 222 aa7.46□□□□□ -1.22
C9orf3-205ENST00000427193 AMHP03971 560 aa7.46□□□□□ -1.22
C9orf3-205ENST00000427193 RAC3P60763 192 aa7.46□□□□□ -1.22
C9orf3-205ENST00000427193 ZMAT1Q5H9K5 638 aa7.46□□□□□ -1.22
C9orf3-205ENST00000427193 NBPF6Q5VWK0 638 aa7.46□□□□□ -1.22
C9orf3-205ENST00000427193 EP400NLQ6ZTU2 488 aa7.46□□□□□ -1.22
C9orf3-205ENST00000427193 TAX1BP1Q86VP1 789 aa7.46□□□□□ -1.22
C9orf3-205ENST00000427193 PCDH19Q8TAB3 1148 aa7.46□□□□□ -1.22
C9orf3-205ENST00000427193 NBPF4Q96M43 638 aa7.46□□□□□ -1.22
C9orf3-205ENST00000427193 PRAM1Q96QH2 718 aa7.46□□□□□ -1.22
C9orf3-205ENST00000427193 SYT17Q9BSW7 474 aa7.46□□□□□ -1.22
C9orf3-205ENST00000427193 PCDHA8Q9Y5H6 950 aa7.46□□□□□ -1.22
C9orf3-205ENST00000427193 NUP188Q5SRE5 1749 aa7.46□□□□□ -1.22
C9orf3-205ENST00000427193 TULP4Q9NRJ4 1543 aa7.46□□□□□ -1.22
C9orf3-205ENST00000427193 KIF7Q2M1P5 1343 aa7.46□□□□□ -1.22
C9orf3-205ENST00000427193 SPATA31A5Q5VU36 1347 aa7.46□□□□□ -1.22
C9orf3-205ENST00000427193 SPATA31A7Q8IWB4 1347 aa7.46□□□□□ -1.22
C9orf3-205ENST00000427193 CDC42BPGQ6DT37 1551 aa7.46□□□□□ -1.22
C9orf3-205ENST00000427193 CCDC7Q96M83 1385 aa7.46□□□□□ -1.22
C9orf3-205ENST00000427193 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.45□□□□□ -1.22
C9orf3-205ENST00000427193 ESYT3A0FGR9 886 aa7.45□□□□□ -1.22
C9orf3-205ENST00000427193 MAN2B1O00754 1011 aa7.45□□□□□ -1.22
C9orf3-205ENST00000427193 AMY2AP04746 511 aa7.45□□□□□ -1.22
C9orf3-205ENST00000427193 C6orf222P0C671 652 aaPredicted RBP7.45□□□□□ -1.22
C9orf3-205ENST00000427193 PDE6AP16499 860 aa7.45□□□□□ -1.22
C9orf3-205ENST00000427193 AMY2BP19961 511 aa7.45□□□□□ -1.22
C9orf3-205ENST00000427193 ETV4P43268 484 aa7.45□□□□□ -1.22
C9orf3-205ENST00000427193 RBM25P49756 843 aaKnown RBP7.45□□□□□ -1.22
C9orf3-205ENST00000427193 GABREP78334 506 aa7.45□□□□□ -1.22
C9orf3-205ENST00000427193 ST5P78524 1137 aa7.45□□□□□ -1.22
C9orf3-205ENST00000427193 GUCY1A3Q02108 690 aa7.45□□□□□ -1.22
C9orf3-205ENST00000427193 SSRP1Q08945 709 aaKnown RBP7.45□□□□□ -1.22
C9orf3-205ENST00000427193 PRKD1Q15139 912 aaPredicted RBP7.45□□□□□ -1.22
C9orf3-205ENST00000427193 CXXC5Q7LFL8 322 aaKnown RBP7.45□□□□□ -1.22
C9orf3-205ENST00000427193 SCYL1Q96KG9 808 aa7.45□□□□□ -1.22
C9orf3-205ENST00000427193 PYGMP11217 842 aa7.44□□□□□ -1.22
C9orf3-205ENST00000427193 PTGS1P23219 599 aa7.44□□□□□ -1.22
C9orf3-205ENST00000427193 HMGA2P52926 109 aa7.44□□□□□ -1.22
C9orf3-205ENST00000427193 ZC3H6P61129 1189 aaKnown RBP7.44□□□□□ -1.22
C9orf3-205ENST00000427193 HERVK_113P62684 666 aa7.44□□□□□ -1.22
C9orf3-205ENST00000427193 CRY1Q16526 586 aa7.44□□□□□ -1.22
C9orf3-205ENST00000427193 WDR72Q3MJ13 1102 aa7.44□□□□□ -1.22
C9orf3-205ENST00000427193 FAM209AQ5JX71 171 aa7.44□□□□□ -1.22
C9orf3-205ENST00000427193 OSTM1Q86WC4 334 aa7.44□□□□□ -1.22
C9orf3-205ENST00000427193 PTRH1Q86Y79 214 aaKnown RBP7.44□□□□□ -1.22
C9orf3-205ENST00000427193 HIRIP3Q9BW71 556 aaPredicted RBP7.44□□□□□ -1.22
C9orf3-205ENST00000427193 STK26Q9P289 416 aa7.44□□□□□ -1.22
C9orf3-205ENST00000427193 PFDN2Q9UHV9 154 aa7.44□□□□□ -1.22
C9orf3-205ENST00000427193 FBXO10Q9UK96 956 aa7.44□□□□□ -1.22
C9orf3-205ENST00000427193 CBLCQ9ULV8 474 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms