RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 BTG3Q14201 252 aaPredicted RBP15.18■□□□□ 0.02
SNX3-204ENST00000426155 ODR4Q5SWX8 454 aa15.18■□□□□ 0.02
SNX3-204ENST00000426155 FAM102BQ5T8I3 360 aa15.18■□□□□ 0.02
SNX3-204ENST00000426155 MAEAQ7L5Y9 396 aa15.18■□□□□ 0.02
SNX3-204ENST00000426155 ZNF410Q86VK4 478 aa15.18■□□□□ 0.02
SNX3-204ENST00000426155 FIBCD1Q8N539 461 aa15.18■□□□□ 0.02
SNX3-204ENST00000426155 IGSF22Q8N9C0 903 aa15.18■□□□□ 0.02
SNX3-204ENST00000426155 FBXO22Q8NEZ5 403 aa15.18■□□□□ 0.02
SNX3-204ENST00000426155 ERMNQ8TAM6 284 aa15.18■□□□□ 0.02
SNX3-204ENST00000426155 SNX29Q8TEQ0 813 aa15.18■□□□□ 0.02
SNX3-204ENST00000426155 PSPC1Q8WXF1 523 aaKnown RBP15.18■□□□□ 0.02
SNX3-204ENST00000426155 MINDY3Q9H8M7 445 aa15.18■□□□□ 0.02
SNX3-204ENST00000426155 ATP6V0A4Q9HBG4 840 aa15.18■□□□□ 0.02
SNX3-204ENST00000426155 IFT122Q9HBG6 1241 aa15.18■□□□□ 0.02
SNX3-204ENST00000426155 GPRC5CQ9NQ84 441 aa15.18■□□□□ 0.02
SNX3-204ENST00000426155 LRFN2Q9ULH4 789 aa15.18■□□□□ 0.02
SNX3-204ENST00000426155 PPME1Q9Y570 386 aa15.18■□□□□ 0.02
SNX3-204ENST00000426155 MTCH2Q9Y6C9 303 aa15.18■□□□□ 0.02
SNX3-204ENST00000426155 MRPL42Q9Y6G3 142 aaKnown RBP15.18■□□□□ 0.02
SNX3-204ENST00000426155 DGAT1O75907 488 aa15.17■□□□□ 0.02
SNX3-204ENST00000426155 SYT1P21579 422 aa15.17■□□□□ 0.02
SNX3-204ENST00000426155 CTNNB1P35222 781 aa15.17■□□□□ 0.02
SNX3-204ENST00000426155 ATP2C1P98194 919 aaPredicted RBP15.17■□□□□ 0.02
SNX3-204ENST00000426155 EPC2Q52LR7 807 aa15.17■□□□□ 0.02
SNX3-204ENST00000426155 HAUS3Q68CZ6 603 aa15.17■□□□□ 0.02
SNX3-204ENST00000426155 SLC24A5Q71RS6 500 aa15.17■□□□□ 0.02
SNX3-204ENST00000426155 TMEM192Q8IY95 271 aa15.17■□□□□ 0.02
SNX3-204ENST00000426155 C1orf112Q9NSG2 853 aa15.17■□□□□ 0.02
SNX3-204ENST00000426155 XIRP2A4UGR9 3374 aa15.17■□□□□ 0.02
SNX3-204ENST00000426155 VWA3AA6NCI4 1184 aa15.16■□□□□ 0.02
SNX3-204ENST00000426155 CSPG5O95196 566 aa15.16■□□□□ 0.02
SNX3-204ENST00000426155 STAG3L1P0CL83 205 aa15.16■□□□□ 0.02
SNX3-204ENST00000426155 SFPQP23246 707 aaKnown RBP eCLIP15.16■□□□□ 0.02
SNX3-204ENST00000426155 PRPHP41219 470 aa15.16■□□□□ 0.02
SNX3-204ENST00000426155 CAPSQ13938 189 aa15.16■□□□□ 0.02
SNX3-204ENST00000426155 FAM173BQ6P4H8 233 aa15.16■□□□□ 0.02
SNX3-204ENST00000426155 DTHD1Q6ZMT9 781 aa15.16■□□□□ 0.02
SNX3-204ENST00000426155 CATSPER4Q7RTX7 472 aa15.16■□□□□ 0.02
SNX3-204ENST00000426155 ZNF710Q8N1W2 664 aa15.16■□□□□ 0.02
SNX3-204ENST00000426155 RNF149Q8NC42 400 aa15.16■□□□□ 0.02
SNX3-204ENST00000426155 RNF169Q8NCN4 708 aa15.16■□□□□ 0.02
SNX3-204ENST00000426155 SLC17A8Q8NDX2 589 aa15.16■□□□□ 0.02
SNX3-204ENST00000426155 TCP11Q8WWU5 503 aa15.16■□□□□ 0.02
SNX3-204ENST00000426155 INTS4Q96HW7 963 aaKnown RBP15.16■□□□□ 0.02
SNX3-204ENST00000426155 MMTAG2Q9BU76 263 aaKnown RBP15.16■□□□□ 0.02
SNX3-204ENST00000426155 POLR3FQ9H1D9 316 aaPredicted RBP15.16■□□□□ 0.02
SNX3-204ENST00000426155 POLD4Q9HCU8 107 aa15.16■□□□□ 0.02
SNX3-204ENST00000426155 DDX19AQ9NUU7 478 aaKnown RBP15.16■□□□□ 0.02
SNX3-204ENST00000426155 RNF19AQ9NV58 838 aa15.16■□□□□ 0.02
SNX3-204ENST00000426155 KIAA1024Q9UPX6 916 aa15.16■□□□□ 0.02
SNX3-204ENST00000426155 PIN4Q9Y237 131 aaKnown RBP15.16■□□□□ 0.02
SNX3-204ENST00000426155 PCDHB7Q9Y5E2 793 aa15.16■□□□□ 0.02
SNX3-204ENST00000426155 MYH11P35749 1972 aa15.16■□□□□ 0.02
SNX3-204ENST00000426155 TBKBP1A7MCY6 615 aa15.15■□□□□ 0.02
SNX3-204ENST00000426155 E9PMD0 336 aa15.15■□□□□ 0.02
SNX3-204ENST00000426155 LAD1O00515 517 aa15.15■□□□□ 0.02
SNX3-204ENST00000426155 GAS2O43903 313 aaKnown RBP15.15■□□□□ 0.02
SNX3-204ENST00000426155 ZSCAN20P17040 1043 aaPredicted RBP15.15■□□□□ 0.02
SNX3-204ENST00000426155 ATF7P17544 494 aaPredicted RBP15.15■□□□□ 0.02
SNX3-204ENST00000426155 GLRA2P23416 452 aa15.15■□□□□ 0.02
SNX3-204ENST00000426155 ARL2P36404 184 aa15.15■□□□□ 0.02
SNX3-204ENST00000426155 RESTQ13127 1097 aa15.15■□□□□ 0.02
SNX3-204ENST00000426155 LONRF3Q496Y0 759 aa15.15■□□□□ 0.02
SNX3-204ENST00000426155 ECHDC2Q86YB7 292 aa15.15■□□□□ 0.02
SNX3-204ENST00000426155 EXOC8Q8IYI6 725 aa15.15■□□□□ 0.02
SNX3-204ENST00000426155 CMTR2Q8IYT2 770 aaKnown RBP15.15■□□□□ 0.02
SNX3-204ENST00000426155 SNX21Q969T3 373 aa15.15■□□□□ 0.02
SNX3-204ENST00000426155 NACC1Q96RE7 527 aa15.15■□□□□ 0.02
SNX3-204ENST00000426155 TMEM161AQ9NX61 479 aa15.15■□□□□ 0.02
SNX3-204ENST00000426155 DBR1Q9UK59 544 aaKnown RBP15.15■□□□□ 0.02
SNX3-204ENST00000426155 VCANP13611 3396 aa15.15■□□□□ 0.02
SNX3-204ENST00000426155 ARHGEF35A5YM69 484 aa15.14■□□□□ 0.01
SNX3-204ENST00000426155 MEIS3P2A8K0S8 358 aa15.14■□□□□ 0.01
SNX3-204ENST00000426155 GTPBP6O43824 516 aaPredicted RBP15.14■□□□□ 0.01
SNX3-204ENST00000426155 XRCC6P12956 609 aaKnown RBP eCLIP15.14■□□□□ 0.01
SNX3-204ENST00000426155 PDCP20941 246 aa15.14■□□□□ 0.01
SNX3-204ENST00000426155 FAM189BP81408 668 aa15.14■□□□□ 0.01
SNX3-204ENST00000426155 CDC42EP1Q00587 391 aa15.14■□□□□ 0.01
SNX3-204ENST00000426155 GRIN1Q05586 938 aa15.14■□□□□ 0.01
SNX3-204ENST00000426155 GPM6BQ13491 265 aa15.14■□□□□ 0.01
SNX3-204ENST00000426155 PDIA5Q14554 519 aa15.14■□□□□ 0.01
SNX3-204ENST00000426155 ZRSR1Q15695 479 aaKnown RBP15.14■□□□□ 0.01
SNX3-204ENST00000426155 TWF2Q6IBS0 349 aaKnown RBP15.14■□□□□ 0.01
SNX3-204ENST00000426155 PADI6Q6TGC4 694 aa15.14■□□□□ 0.01
SNX3-204ENST00000426155 KCNK18Q7Z418 384 aa15.14■□□□□ 0.01
SNX3-204ENST00000426155 BRAPQ7Z569 592 aa15.14■□□□□ 0.01
SNX3-204ENST00000426155 HSCBQ8IWL3 235 aa15.14■□□□□ 0.01
SNX3-204ENST00000426155 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.14■□□□□ 0.01
SNX3-204ENST00000426155 BSNDQ8WZ55 320 aa15.14■□□□□ 0.01
SNX3-204ENST00000426155 CLP1Q92989 425 aaKnown RBP15.14■□□□□ 0.01
SNX3-204ENST00000426155 BHMT2Q9H2M3 363 aa15.14■□□□□ 0.01
SNX3-204ENST00000426155 MTMR6Q9Y217 621 aa15.14■□□□□ 0.01
SNX3-204ENST00000426155 MYO7AQ13402 2215 aa15.14■□□□□ 0.01
SNX3-204ENST00000426155 H3BNC9 293 aa15.13■□□□□ 0.01
SNX3-204ENST00000426155 POU3F3P20264 500 aaPredicted RBP15.13■□□□□ 0.01
SNX3-204ENST00000426155 BMPR1AP36894 532 aa15.13■□□□□ 0.01
SNX3-204ENST00000426155 PHKA2P46019 1235 aa15.13■□□□□ 0.01
SNX3-204ENST00000426155 PTENP60484 403 aa15.13■□□□□ 0.01
SNX3-204ENST00000426155 SF3A1Q15459 793 aaKnown RBP15.13■□□□□ 0.01
SNX3-204ENST00000426155 CLLU1OSQ5K130 101 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms