RNA–Protein interactions for RNA: ENST00000424674.1

SF3B1-205, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 4

Gene SF3B1, Length 723 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-205ENST00000424674 SF1Q15637 639 aaKnown RBP4.33□□□□□ -1.72
SF3B1-205ENST00000424674 SPATA1Q5VX52 437 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 CYB5RLQ6IPT4 315 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 FAM180BQ6P0A1 224 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 LIPIQ6XZB0 460 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 SRGAP1Q7Z6B7 1085 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 FRMD5Q7Z6J6 570 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 UBE2Q1Q7Z7E8 422 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 OTUD6BQ8N6M0 293 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 BVESQ8NE79 360 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 COPS5Q92905 334 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 FUBP3Q96I24 572 aaKnown RBP eCLIP4.33□□□□□ -1.72
SF3B1-205ENST00000424674 EIF2AK1Q9BQI3 630 aaKnown RBP4.33□□□□□ -1.72
SF3B1-205ENST00000424674 KRTAP9-3Q9BYQ3 159 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 PDGFDQ9GZP0 370 aaPredicted RBP4.33□□□□□ -1.72
SF3B1-205ENST00000424674 BCAS3Q9H6U6 928 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 AGO4Q9HCK5 861 aaKnown RBP4.33□□□□□ -1.72
SF3B1-205ENST00000424674 TBC1D22BQ9NU19 505 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 CLEC1BQ9P126 229 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 PDP2Q9P2J9 529 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 LRP2BPQ9P2M1 347 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 GJD2Q9UKL4 321 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 TPCN1Q9ULQ1 816 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 LRCH1Q9Y2L9 728 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 SH3BP1Q9Y3L3 701 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 PCDHGB3Q9Y5G1 929 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 SLC4A7Q9Y6M7 1214 aa4.33□□□□□ -1.72
SF3B1-205ENST00000424674 A0A1B0GTL3 188 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 GTPBP10A4D1E9 387 aaKnown RBP4.32□□□□□ -1.72
SF3B1-205ENST00000424674 C7orf72A4D263 438 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 SH3D21A4FU49 640 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 FAM83GA6ND36 823 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 OPA1O60313 960 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 PPP1R11O60927 126 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-205ENST00000424674 BAIAP3O94812 1187 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 LTFP02788 710 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 CELA3BP08861 270 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 PLS3P13797 630 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 RHCEP18577 417 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 OAS2P29728 719 aaKnown RBP4.32□□□□□ -1.72
SF3B1-205ENST00000424674 RHDQ02161 417 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 HSP90AA2PQ14568 343 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-205ENST00000424674 PCBP1Q15365 356 aaKnown RBP eCLIP4.32□□□□□ -1.72
SF3B1-205ENST00000424674 SKOR2Q2VWA4 1001 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-205ENST00000424674 TRIM61Q5EBN2 209 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 VPS53Q5VIR6 699 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 FOXB2Q5VYV0 432 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 IQSEC1Q6DN90 963 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 GTF2IRD2BQ6EKJ0 949 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 SWSAP1Q6NVH7 229 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 TLDC1Q6P9B6 456 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 CHST15Q7LFX5 561 aaPredicted RBP4.32□□□□□ -1.72
SF3B1-205ENST00000424674 GTF2IRD2Q86UP8 949 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 SKAP1Q86WV1 359 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 SNX32Q86XE0 403 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 DCP2Q8IU60 420 aaKnown RBP4.32□□□□□ -1.72
SF3B1-205ENST00000424674 ANKRD18AQ8IVF6 992 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 TRIM59Q8IWR1 403 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 SCUBE1Q8IWY4 988 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 ADGRG2Q8IZP9 1017 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 AFAP1L1Q8TED9 768 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 BTN2A2Q8WVV5 523 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 CPA5Q8WXQ8 436 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 SGCZQ96LD1 299 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 MMP19Q99542 508 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 SPATA25Q9BR10 227 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 NUDT16L1Q9BRJ7 211 aaKnown RBP4.32□□□□□ -1.72
SF3B1-205ENST00000424674 MYLK2Q9H1R3 596 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 CXorf56Q9H5V9 222 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 ARFGAP3Q9NP61 516 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 ANLNQ9NQW6 1124 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 SMYD2Q9NRG4 433 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 SMC4Q9NTJ3 1288 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 BLOC1S4Q9NUP1 217 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 RRN3Q9NYV6 651 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 DDX20Q9UHI6 824 aaKnown RBP4.32□□□□□ -1.72
SF3B1-205ENST00000424674 ZNF652Q9Y2D9 606 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 PTPN22Q9Y2R2 807 aa4.32□□□□□ -1.72
SF3B1-205ENST00000424674 ANKRD18BA2A2Z9 1011 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 NEMP1O14524 444 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 NCAM2O15394 837 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 MAFKO60675 156 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 KPNA6O60684 536 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 EFCAB14O75071 495 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 PRKD3O94806 890 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 BAG2O95816 211 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 FUCA1P04066 466 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 NTRK1P04629 796 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 ITGAVP06756 1048 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 THBDP07204 575 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 IFIT1P09914 478 aaKnown RBP4.31□□□□□ -1.72
SF3B1-205ENST00000424674 CTNNA1P35221 906 aaKnown RBP4.31□□□□□ -1.72
SF3B1-205ENST00000424674 IGFALSP35858 605 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 ECI1P42126 302 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 RAD52P43351 418 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 STT3AP46977 705 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 ZNF131P52739 623 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 PLIN5Q00G26 463 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 ROR1Q01973 937 aa4.31□□□□□ -1.72
SF3B1-205ENST00000424674 DLX2Q07687 328 aaPredicted RBP4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms