RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 HSPA1BP0DMV9 641 aaKnown RBP9.88□□□□□ -0.83
HPS4-204ENST00000422379 GAP43P17677 238 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 KLRC1P26715 233 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 ERCC5P28715 1186 aaPredicted RBP9.88□□□□□ -0.83
HPS4-204ENST00000422379 HOXC8P31273 242 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 PSEN2P49810 448 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 PRMT2P55345 433 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 ADAM17P78536 824 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 FANCCQ00597 558 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 TBC1D8BQ0IIM8 1120 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 PPFIA1Q13136 1202 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 PAK1Q13153 545 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 PSMD2Q13200 908 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 CAPSQ13938 189 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 GRIK4Q16099 956 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 KCNA10Q16322 511 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 CENPPQ6IPU0 288 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 RUFY4Q6ZNE9 571 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 FAM178BQ8IXR5 827 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 TMEM161BQ8NDZ6 487 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 ENOX1Q8TC92 643 aaKnown RBP9.88□□□□□ -0.83
HPS4-204ENST00000422379 KIAA1524Q8TCG1 905 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 CACTINQ8WUQ7 758 aaKnown RBP9.88□□□□□ -0.83
HPS4-204ENST00000422379 PRPF31Q8WWY3 499 aaKnown RBP9.88□□□□□ -0.83
HPS4-204ENST00000422379 SLC7A3Q8WY07 619 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 CTAGE1Q96RT6 745 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 SUGCTQ9HAC7 445 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 RWDD2AQ9UIY3 292 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 NFE2L3Q9Y4A8 694 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 TTLL13PA6NNM8 815 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 GCNT3O95395 438 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 ASGR1P07306 291 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 ZNF18P17022 549 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 RFC5P40937 340 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 NCKAP1LP55160 1127 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 BMT2Q1RMZ1 405 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 MTHFD1LQ6UB35 978 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 PDZRN4Q6ZMN7 1036 aaPredicted RBP9.88□□□□□ -0.83
HPS4-204ENST00000422379 FILIP1Q7Z7B0 1213 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 MYOCDQ8IZQ8 938 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 MCPH1Q8NEM0 835 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 ZNF507Q8TCN5 953 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 P2RX5Q93086 422 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 DRC1Q96MC2 740 aa9.88□□□□□ -0.83
HPS4-204ENST00000422379 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.88□□□□□ -0.83
HPS4-204ENST00000422379 HMX1Q9NP08 348 aaPredicted RBP9.88□□□□□ -0.83
HPS4-204ENST00000422379 ZNF215Q9UL58 517 aaPredicted RBP9.88□□□□□ -0.83
HPS4-204ENST00000422379 SCN10AQ9Y5Y9 1956 aa9.87□□□□□ -0.83
HPS4-204ENST00000422379 CCNE1P24864 410 aa9.87□□□□□ -0.83
HPS4-204ENST00000422379 CST5P28325 142 aaPredicted RBP9.87□□□□□ -0.83
HPS4-204ENST00000422379 ARID5BQ14865 1188 aa9.87□□□□□ -0.83
HPS4-204ENST00000422379 NOLC1Q14978 699 aaKnown RBP eCLIP9.87□□□□□ -0.83
HPS4-204ENST00000422379 ZNF484Q5JVG2 852 aa9.87□□□□□ -0.83
HPS4-204ENST00000422379 EFCAB12Q6NXP0 572 aa9.87□□□□□ -0.83
HPS4-204ENST00000422379 LRRC55Q6ZSA7 311 aa9.87□□□□□ -0.83
HPS4-204ENST00000422379 APTXQ7Z2E3 356 aaKnown RBP9.87□□□□□ -0.83
HPS4-204ENST00000422379 HAUS6Q7Z4H7 955 aa9.87□□□□□ -0.83
HPS4-204ENST00000422379 KIFAP3Q92845 792 aa9.87□□□□□ -0.83
HPS4-204ENST00000422379 WNT8BQ93098 351 aa9.87□□□□□ -0.83
HPS4-204ENST00000422379 DHTKD1Q96HY7 919 aaPredicted RBP9.87□□□□□ -0.83
HPS4-204ENST00000422379 NTPCRQ9BSD7 190 aaKnown RBP9.87□□□□□ -0.83
HPS4-204ENST00000422379 TIPINQ9BVW5 301 aa9.87□□□□□ -0.83
HPS4-204ENST00000422379 PAK6Q9NQU5 681 aaPredicted RBP9.87□□□□□ -0.83
HPS4-204ENST00000422379 SPTLC3Q9NUV7 552 aa9.87□□□□□ -0.83
HPS4-204ENST00000422379 ARHGAP28Q9P2N2 729 aa9.87□□□□□ -0.83
HPS4-204ENST00000422379 HDAC6Q9UBN7 1215 aa9.87□□□□□ -0.83
HPS4-204ENST00000422379 SEL1LQ9UBV2 794 aa9.87□□□□□ -0.83
HPS4-204ENST00000422379 FRMPD3Q5JV73 1810 aa9.87□□□□□ -0.83
HPS4-204ENST00000422379 MBLAC1A4D2B0 266 aaPredicted RBP9.86□□□□□ -0.83
HPS4-204ENST00000422379 K7ENM7 598 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 PSMA7O14818 248 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 TREHO43280 583 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 VTNP04004 478 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 IQCF3P0C7M6 154 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 MAPTP10636 758 aaKnown RBP9.86□□□□□ -0.83
HPS4-204ENST00000422379 RTP1P59025 263 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 GTF2BQ00403 316 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 LAMTOR4Q0VGL1 99 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 ARHGEF6Q15052 776 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 NBPF20Q3BBV1 942 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 CDKAL1Q5VV42 579 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 SPATA1Q5VX52 437 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 SLC39A4Q6P5W5 647 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 LRRC8AQ8IWT6 810 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 KIAA0319LQ8IZA0 1049 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 METTL13Q8N6R0 699 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 ZSWIM2Q8NEG5 633 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 SPIRE2Q8WWL2 714 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 CCDC47Q96A33 483 aaKnown RBP9.86□□□□□ -0.83
HPS4-204ENST00000422379 PPP1R16BQ96T49 567 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 MTG1Q9BT17 334 aaPredicted RBP9.86□□□□□ -0.83
HPS4-204ENST00000422379 MINDY3Q9H8M7 445 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 LARSQ9P2J5 1176 aaKnown RBP9.86□□□□□ -0.83
HPS4-204ENST00000422379 SUCLA2Q9P2R7 463 aaPredicted RBP9.86□□□□□ -0.83
HPS4-204ENST00000422379 COL1A2P08123 1366 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 MYH11P35749 1972 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 DENND3A2RUS2 1198 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 CCDC169A6NNP5 214 aa9.86□□□□□ -0.83
HPS4-204ENST00000422379 CSDE1O75534 798 aaKnown RBP9.86□□□□□ -0.83
HPS4-204ENST00000422379 SERPINC1P01008 464 aa9.86□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms