RNA–Protein interactions for RNA: ENST00000419205.5

FAM3A-208, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2 BASIC

Gene FAM3A, Length 1,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-208ENST00000419205 NAGPAQ9UK23 515 aa22.58■■□□□ 1.21
FAM3A-208ENST00000419205 AFG3L2Q9Y4W6 797 aa22.58■■□□□ 1.21
FAM3A-208ENST00000419205 PCDHA10Q9Y5I2 948 aa22.58■■□□□ 1.21
FAM3A-208ENST00000419205 KRT13P13646 458 aa22.58■■□□□ 1.2
FAM3A-208ENST00000419205 KCNA2P16389 499 aa22.58■■□□□ 1.2
FAM3A-208ENST00000419205 RFX1P22670 979 aa22.58■■□□□ 1.2
FAM3A-208ENST00000419205 NAP1L1P55209 391 aaKnown RBP22.58■■□□□ 1.2
FAM3A-208ENST00000419205 PLS1Q14651 629 aa22.58■■□□□ 1.2
FAM3A-208ENST00000419205 XKR9Q5GH70 373 aa22.58■■□□□ 1.2
FAM3A-208ENST00000419205 SH3D19Q5HYK7 790 aa22.58■■□□□ 1.2
FAM3A-208ENST00000419205 NFRKBQ6P4R8 1299 aa22.58■■□□□ 1.2
FAM3A-208ENST00000419205 GJB7Q6PEY0 223 aa22.58■■□□□ 1.2
FAM3A-208ENST00000419205 MMGT1Q8N4V1 131 aa22.58■■□□□ 1.2
FAM3A-208ENST00000419205 NLGN2Q8NFZ4 835 aa22.58■■□□□ 1.2
FAM3A-208ENST00000419205 PACSIN1Q9BY11 444 aa22.58■■□□□ 1.2
FAM3A-208ENST00000419205 INTS2Q9H0H0 1204 aaKnown RBP22.58■■□□□ 1.2
FAM3A-208ENST00000419205 ABCB6Q9NP58 842 aa22.58■■□□□ 1.2
FAM3A-208ENST00000419205 CYP39A1Q9NYL5 469 aa22.58■■□□□ 1.2
FAM3A-208ENST00000419205 L1RE1Q9UN81 338 aa22.58■■□□□ 1.2
FAM3A-208ENST00000419205 LCTP09848 1927 aa22.58■■□□□ 1.2
FAM3A-208ENST00000419205 NFASCO94856 1347 aa22.57■■□□□ 1.2
FAM3A-208ENST00000419205 F8VZ95 297 aa22.57■■□□□ 1.2
FAM3A-208ENST00000419205 DKC1O60832 514 aaKnown RBP eCLIP22.57■■□□□ 1.2
FAM3A-208ENST00000419205 TRIM49P0CI25 452 aa22.57■■□□□ 1.2
FAM3A-208ENST00000419205 TRIM49CP0CI26 452 aa22.57■■□□□ 1.2
FAM3A-208ENST00000419205 SOX5P35711 763 aa22.57■■□□□ 1.2
FAM3A-208ENST00000419205 HIRAP54198 1017 aaPredicted RBP22.57■■□□□ 1.2
FAM3A-208ENST00000419205 UTP14CQ5TAP6 766 aaKnown RBP22.57■■□□□ 1.2
FAM3A-208ENST00000419205 DDX55Q8NHQ9 600 aaKnown RBP eCLIP22.57■■□□□ 1.21e-8■■■□□ 17.1
FAM3A-208ENST00000419205 HVCN1Q96D96 273 aa22.57■■□□□ 1.2
FAM3A-208ENST00000419205 CDHR1Q96JP9 859 aa22.57■■□□□ 1.2
FAM3A-208ENST00000419205 HOXC10Q9NYD6 342 aa22.57■■□□□ 1.2
FAM3A-208ENST00000419205 RNF14Q9UBS8 474 aa22.57■■□□□ 1.2
FAM3A-208ENST00000419205 TMEM150BA6NC51 233 aa22.56■■□□□ 1.2
FAM3A-208ENST00000419205 P4HA2O15460 535 aa22.56■■□□□ 1.2
FAM3A-208ENST00000419205 N4BP1O75113 896 aaKnown RBP22.56■■□□□ 1.2
FAM3A-208ENST00000419205 PALMO75781 387 aa22.56■■□□□ 1.2
FAM3A-208ENST00000419205 MCCD1P59942 119 aaPredicted RBP22.56■■□□□ 1.2
FAM3A-208ENST00000419205 HDXQ7Z353 690 aa22.56■■□□□ 1.2
FAM3A-208ENST00000419205 A1CFQ9NQ94 594 aaKnown RBP22.56■■□□□ 1.2
FAM3A-208ENST00000419205 APEX2Q9UBZ4 518 aa22.56■■□□□ 1.2
FAM3A-208ENST00000419205 DNAJC12Q9UKB3 198 aa22.56■■□□□ 1.2
FAM3A-208ENST00000419205 INTUQ9ULD6 942 aa22.56■■□□□ 1.2
FAM3A-208ENST00000419205 PAPPA2Q9BXP8 1791 aa22.56■■□□□ 1.2
FAM3A-208ENST00000419205 SPDYE16A6NNV3 312 aaPredicted RBP22.55■■□□□ 1.2
FAM3A-208ENST00000419205 RGS20O76081 388 aa22.55■■□□□ 1.2
FAM3A-208ENST00000419205 PLA2G4FQ68DD2 849 aa22.55■■□□□ 1.2
FAM3A-208ENST00000419205 ALKBH5Q6P6C2 394 aaKnown RBP22.55■■□□□ 1.2
FAM3A-208ENST00000419205 ANO5Q75V66 913 aa22.55■■□□□ 1.2
FAM3A-208ENST00000419205 OTUD6AQ7L8S5 288 aa22.55■■□□□ 1.2
FAM3A-208ENST00000419205 XXYLT1Q8NBI6 393 aa22.55■■□□□ 1.2
FAM3A-208ENST00000419205 ATP6V0A1Q93050 837 aa22.55■■□□□ 1.2
FAM3A-208ENST00000419205 PTPRFP10586 1907 aa22.55■■□□□ 1.2
FAM3A-208ENST00000419205 NCK2O43639 380 aa22.55■■□□□ 1.2
FAM3A-208ENST00000419205 VAMP7P51809 220 aa22.55■■□□□ 1.2
FAM3A-208ENST00000419205 NPEPPSP55786 919 aa22.55■■□□□ 1.2
FAM3A-208ENST00000419205 PEX3P56589 373 aa22.55■■□□□ 1.2
FAM3A-208ENST00000419205 IFI16Q16666 785 aaKnown RBP22.55■■□□□ 1.2
FAM3A-208ENST00000419205 MEI1Q5TIA1 1274 aa22.55■■□□□ 1.2
FAM3A-208ENST00000419205 RUBCNQ92622 972 aa22.55■■□□□ 1.2
FAM3A-208ENST00000419205 SH2D3AQ9BRG2 576 aa22.55■■□□□ 1.2
FAM3A-208ENST00000419205 CBWD1Q9BRT8 395 aa22.55■■□□□ 1.2
FAM3A-208ENST00000419205 GPRC5CQ9NQ84 441 aa22.55■■□□□ 1.2
FAM3A-208ENST00000419205 HSPBP1Q9NZL4 362 aa22.55■■□□□ 1.2
FAM3A-208ENST00000419205 EXOC7Q9UPT5 735 aa22.55■■□□□ 1.2
FAM3A-208ENST00000419205 A0A0G2JMZ2 1700 aa22.54■■□□□ 1.2
FAM3A-208ENST00000419205 POLR2AP24928 1970 aaKnown RBP22.54■■□□□ 1.2
FAM3A-208ENST00000419205 SLC16A4O15374 487 aa22.54■■□□□ 1.2
FAM3A-208ENST00000419205 EVI5O60447 810 aa22.54■■□□□ 1.2
FAM3A-208ENST00000419205 PSAPP07602 524 aa22.54■■□□□ 1.2
FAM3A-208ENST00000419205 C2orf54Q08AI8 447 aa22.54■■□□□ 1.2
FAM3A-208ENST00000419205 DRAP1Q14919 205 aaPredicted RBP22.54■■□□□ 1.2
FAM3A-208ENST00000419205 FAM102BQ5T8I3 360 aa22.54■■□□□ 1.2
FAM3A-208ENST00000419205 SPATA4Q8NEY3 305 aa22.54■■□□□ 1.2
FAM3A-208ENST00000419205 LMO3Q8TAP4 145 aa22.54■■□□□ 1.2
FAM3A-208ENST00000419205 GPR88Q9GZN0 384 aa22.54■■□□□ 1.2
FAM3A-208ENST00000419205 C17orf75Q9HAS0 396 aa22.54■■□□□ 1.2
FAM3A-208ENST00000419205 PRDM10Q9NQV6 1147 aa22.54■■□□□ 1.2
FAM3A-208ENST00000419205 DOCK5Q9H7D0 1870 aa22.54■■□□□ 1.2
FAM3A-208ENST00000419205 GRID2IPA4D2P6 1211 aa22.53■■□□□ 1.2
FAM3A-208ENST00000419205 TISP43B9A030 160 aa22.53■■□□□ 1.2
FAM3A-208ENST00000419205 DDX3XO00571 662 aaKnown RBP eCLIP22.53■■□□□ 1.23e-8■■■■■ 27.9
FAM3A-208ENST00000419205 PMM2O15305 246 aa22.53■■□□□ 1.2
FAM3A-208ENST00000419205 STBD1O95210 358 aa22.53■■□□□ 1.2
FAM3A-208ENST00000419205 CCDC172P0C7W6 258 aa22.53■■□□□ 1.2
FAM3A-208ENST00000419205 LMNB1P20700 586 aa22.53■■□□□ 1.2
FAM3A-208ENST00000419205 PAFAH1B1P43034 410 aa22.53■■□□□ 1.2
FAM3A-208ENST00000419205 SMTNP53814 917 aa22.53■■□□□ 1.2
FAM3A-208ENST00000419205 CCDC181Q5TID7 509 aa22.53■■□□□ 1.2
FAM3A-208ENST00000419205 CCDC70Q6NSX1 233 aa22.53■■□□□ 1.2
FAM3A-208ENST00000419205 RDH13Q8NBN7 331 aa22.53■■□□□ 1.2
FAM3A-208ENST00000419205 SLC30A5Q8TAD4 765 aa22.53■■□□□ 1.2
FAM3A-208ENST00000419205 SPIRE2Q8WWL2 714 aa22.53■■□□□ 1.2
FAM3A-208ENST00000419205 KIFAP3Q92845 792 aa22.53■■□□□ 1.2
FAM3A-208ENST00000419205 VTI1AQ96AJ9 217 aa22.53■■□□□ 1.2
FAM3A-208ENST00000419205 PCIF1Q9H4Z3 704 aa22.53■■□□□ 1.2
FAM3A-208ENST00000419205 GABBR1Q9UBS5 961 aa22.53■■□□□ 1.2
FAM3A-208ENST00000419205 SBF1O95248 1867 aa22.53■■□□□ 1.2
FAM3A-208ENST00000419205 A0A0A6YYK5 440 aaPredicted RBP22.53■■□□□ 1.2
FAM3A-208ENST00000419205 SPATA31C2B4DYI2 1134 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms