RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 TBX20Q9UMR3 447 aa18.37■□□□□ 0.53
SSBP3-205ENST00000417664 SSU72P8A0A1W2PR75 194 aa18.36■□□□□ 0.53
SSBP3-205ENST00000417664 KIF5CO60282 957 aa18.36■□□□□ 0.53
SSBP3-205ENST00000417664 ATP4AP20648 1035 aa18.36■□□□□ 0.53
SSBP3-205ENST00000417664 CYP2J2P51589 502 aa18.36■□□□□ 0.53
SSBP3-205ENST00000417664 POLGP54098 1239 aaPredicted RBP18.36■□□□□ 0.53
SSBP3-205ENST00000417664 MCCD1P59942 119 aaPredicted RBP18.36■□□□□ 0.53
SSBP3-205ENST00000417664 XXYLT1Q8NBI6 393 aa18.36■□□□□ 0.53
SSBP3-205ENST00000417664 SLC7A3Q8WY07 619 aa18.36■□□□□ 0.53
SSBP3-205ENST00000417664 CCDC42Q96M95 316 aa18.36■□□□□ 0.53
SSBP3-205ENST00000417664 HAUS4Q9H6D7 363 aa18.36■□□□□ 0.53
SSBP3-205ENST00000417664 AZI2Q9H6S1 392 aa18.36■□□□□ 0.53
SSBP3-205ENST00000417664 EFCC1Q9HA90 598 aa18.36■□□□□ 0.53
SSBP3-205ENST00000417664 XPNPEP1Q9NQW7 623 aa18.36■□□□□ 0.53
SSBP3-205ENST00000417664 TELO2Q9Y4R8 837 aa18.36■□□□□ 0.53
SSBP3-205ENST00000417664 IVNS1ABPQ9Y6Y0 642 aa18.36■□□□□ 0.53
SSBP3-205ENST00000417664 ZNFX1Q9P2E3 1918 aaKnown RBP18.36■□□□□ 0.53
SSBP3-205ENST00000417664 LRRC53A6NM62 1247 aa18.35■□□□□ 0.53
SSBP3-205ENST00000417664 DYNC1I1O14576 645 aa18.35■□□□□ 0.53
SSBP3-205ENST00000417664 LGR5O75473 907 aa18.35■□□□□ 0.53
SSBP3-205ENST00000417664 KRT13P13646 458 aa18.35■□□□□ 0.53
SSBP3-205ENST00000417664 SLC26A2P50443 739 aa18.35■□□□□ 0.53
SSBP3-205ENST00000417664 BFSP1Q12934 665 aa18.35■□□□□ 0.53
SSBP3-205ENST00000417664 TTLL4Q14679 1199 aa18.35■□□□□ 0.53
SSBP3-205ENST00000417664 EMC2Q15006 297 aa18.35■□□□□ 0.53
SSBP3-205ENST00000417664 ZNF792Q3KQV3 632 aa18.35■□□□□ 0.53
SSBP3-205ENST00000417664 MTERF2Q49AM1 385 aa18.35■□□□□ 0.53
SSBP3-205ENST00000417664 CCDC62Q6P9F0 684 aa18.35■□□□□ 0.53
SSBP3-205ENST00000417664 ZNF526Q8TF50 670 aaPredicted RBP18.35■□□□□ 0.53
SSBP3-205ENST00000417664 SCFD2Q8WU76 684 aa18.35■□□□□ 0.53
SSBP3-205ENST00000417664 GANQ9H2C0 597 aa18.35■□□□□ 0.53
SSBP3-205ENST00000417664 DNAI1Q9UI46 699 aa18.35■□□□□ 0.53
SSBP3-205ENST00000417664 DENND3A2RUS2 1198 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 GAS2O43903 313 aaKnown RBP18.34■□□□□ 0.53
SSBP3-205ENST00000417664 N4BP1O75113 896 aaKnown RBP18.34■□□□□ 0.53
SSBP3-205ENST00000417664 PON1P27169 355 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 TCF7P36402 384 aaPredicted RBP18.34■□□□□ 0.53
SSBP3-205ENST00000417664 POLR2FP61218 127 aaKnown RBP18.34■□□□□ 0.53
SSBP3-205ENST00000417664 GNG11P61952 73 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 ENPEPQ07075 957 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 MAPK8IP2Q13387 824 aaPredicted RBP18.34■□□□□ 0.53
SSBP3-205ENST00000417664 HSP90AA2PQ14568 343 aaPredicted RBP18.34■□□□□ 0.53
SSBP3-205ENST00000417664 TARBP2Q15633 366 aaKnown RBP18.34■□□□□ 0.53
SSBP3-205ENST00000417664 LY6KQ17RY6 165 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 BRDTQ58F21 947 aaPredicted RBP18.34■□□□□ 0.53
SSBP3-205ENST00000417664 SFMBT2Q5VUG0 894 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 EEPD1Q7L9B9 569 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 PLPPR4Q7Z2D5 763 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 TXLNBQ8N3L3 684 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 ANKRD13CQ8N6S4 541 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 ACRBPQ8NEB7 543 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 PCYT2Q99447 389 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 CRACR2AQ9BSW2 395 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 L2HGDHQ9H9P8 463 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 AIPL1Q9NZN9 384 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 ARHGAP28Q9P2N2 729 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 DIS3Q9Y2L1 958 aaKnown RBP18.34■□□□□ 0.53
SSBP3-205ENST00000417664 NOP56O00567 594 aaKnown RBP18.34■□□□□ 0.53
SSBP3-205ENST00000417664 P4HA2O15460 535 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 SORBS3O60504 671 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 FMO5P49326 533 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 SPA17Q15506 151 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 FAM110CQ1W6H9 321 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 SLC9C1Q4G0N8 1177 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 KLHDC7AQ5VTJ3 777 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 FMNL3Q8IVF7 1028 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 DHX37Q8IY37 1157 aaKnown RBP18.34■□□□□ 0.53
SSBP3-205ENST00000417664 BBXQ8WY36 941 aaPredicted RBP18.34■□□□□ 0.53
SSBP3-205ENST00000417664 GPR20Q99678 358 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 POLR3FQ9H1D9 316 aaPredicted RBP18.34■□□□□ 0.53
SSBP3-205ENST00000417664 IKZF4Q9H2S9 585 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 ZCCHC17Q9NP64 241 aaKnown RBP18.34■□□□□ 0.53
SSBP3-205ENST00000417664 VTA1Q9NP79 307 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 HSPBP1Q9NZL4 362 aa18.34■□□□□ 0.53
SSBP3-205ENST00000417664 EMSYQ7Z589 1322 aa18.33■□□□□ 0.53
SSBP3-205ENST00000417664 PMM2O15305 246 aa18.33■□□□□ 0.52
SSBP3-205ENST00000417664 ARIH2O95376 493 aa18.33■□□□□ 0.52
SSBP3-205ENST00000417664 LCA5LO95447 670 aa18.33■□□□□ 0.52
SSBP3-205ENST00000417664 SERPING1P05155 500 aa18.33■□□□□ 0.52
SSBP3-205ENST00000417664 UCHL3P15374 230 aa18.33■□□□□ 0.52
SSBP3-205ENST00000417664 ADORA2AP29274 412 aa18.33■□□□□ 0.52
SSBP3-205ENST00000417664 CNGA1P29973 690 aa18.33■□□□□ 0.52
SSBP3-205ENST00000417664 CASQ1P31415 396 aa18.33■□□□□ 0.52
SSBP3-205ENST00000417664 NAMPTP43490 491 aa18.33■□□□□ 0.52
SSBP3-205ENST00000417664 CETN1Q12798 172 aa18.33■□□□□ 0.52
SSBP3-205ENST00000417664 DPY19L2P1Q6NXN4 242 aa18.33■□□□□ 0.52
SSBP3-205ENST00000417664 ARMCX2Q7L311 632 aa18.33■□□□□ 0.52
SSBP3-205ENST00000417664 BSNDQ8WZ55 320 aa18.33■□□□□ 0.52
SSBP3-205ENST00000417664 CEP89Q96ST8 783 aa18.33■□□□□ 0.52
SSBP3-205ENST00000417664 LZTFL1Q9NQ48 299 aa18.33■□□□□ 0.52
SSBP3-205ENST00000417664 ARHGAP20Q9P2F6 1191 aa18.33■□□□□ 0.52
SSBP3-205ENST00000417664 BZW2Q9Y6E2 419 aaKnown RBP18.33■□□□□ 0.52
SSBP3-205ENST00000417664 TXNP10599 105 aaKnown RBP18.32■□□□□ 0.52
SSBP3-205ENST00000417664 MAPK4P31152 587 aa18.32■□□□□ 0.52
SSBP3-205ENST00000417664 USP37Q86T82 979 aa18.32■□□□□ 0.52
SSBP3-205ENST00000417664 EHBP1Q8NDI1 1231 aa18.32■□□□□ 0.52
SSBP3-205ENST00000417664 JPH2Q9BR39 696 aaPredicted RBP18.32■□□□□ 0.52
SSBP3-205ENST00000417664 TSGA10Q9BZW7 698 aa18.32■□□□□ 0.52
SSBP3-205ENST00000417664 DEF6Q9H4E7 631 aa18.32■□□□□ 0.52
SSBP3-205ENST00000417664 NLRC4Q9NPP4 1024 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms