RNA–Protein interactions for RNA: ENST00000412507.1

TRIM56-202, Transcript of tripartite motif containing 56, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRIM56, Length 1,129 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-202ENST00000412507 ATP6V0A4Q9HBG4 840 aa20.99■□□□□ 0.95
TRIM56-202ENST00000412507 IFT122Q9HBG6 1241 aa20.99■□□□□ 0.95
TRIM56-202ENST00000412507 BRWD1Q9NSI6 2320 aa20.99■□□□□ 0.95
TRIM56-202ENST00000412507 UNC80Q8N2C7 3258 aa20.98■□□□□ 0.95
TRIM56-202ENST00000412507 VPS37CA5D8V6 355 aaPredicted RBP20.98■□□□□ 0.95
TRIM56-202ENST00000412507 LINC00271P0C7V0 271 aa20.98■□□□□ 0.95
TRIM56-202ENST00000412507 SFPQP23246 707 aaKnown RBP eCLIP20.98■□□□□ 0.95
TRIM56-202ENST00000412507 CCT6AP40227 531 aaKnown RBP20.98■□□□□ 0.95
TRIM56-202ENST00000412507 FAM189BP81408 668 aa20.98■□□□□ 0.95
TRIM56-202ENST00000412507 PDIA5Q14554 519 aa20.98■□□□□ 0.95
TRIM56-202ENST00000412507 IL17AQ16552 155 aa20.98■□□□□ 0.95
TRIM56-202ENST00000412507 FAM102BQ5T8I3 360 aa20.98■□□□□ 0.95
TRIM56-202ENST00000412507 HAUS3Q68CZ6 603 aa20.98■□□□□ 0.95
TRIM56-202ENST00000412507 CMTR2Q8IYT2 770 aaKnown RBP20.98■□□□□ 0.95
TRIM56-202ENST00000412507 IGSF22Q8N9C0 903 aa20.98■□□□□ 0.95
TRIM56-202ENST00000412507 FOXD4L1Q9NU39 408 aa20.98■□□□□ 0.95
TRIM56-202ENST00000412507 RNF216Q9NWF9 866 aaPredicted RBP20.98■□□□□ 0.95
TRIM56-202ENST00000412507 ASAP2O43150 1006 aa20.97■□□□□ 0.95
TRIM56-202ENST00000412507 USO1O60763 962 aaKnown RBP20.97■□□□□ 0.95
TRIM56-202ENST00000412507 CTNNB1P35222 781 aa20.97■□□□□ 0.95
TRIM56-202ENST00000412507 PRPHP41219 470 aa20.97■□□□□ 0.95
TRIM56-202ENST00000412507 ECM1Q16610 540 aa20.97■□□□□ 0.95
TRIM56-202ENST00000412507 DTHD1Q6ZMT9 781 aa20.97■□□□□ 0.95
TRIM56-202ENST00000412507 CATSPER4Q7RTX7 472 aa20.97■□□□□ 0.95
TRIM56-202ENST00000412507 RAB34Q9BZG1 259 aa20.97■□□□□ 0.95
TRIM56-202ENST00000412507 MINDY3Q9H8M7 445 aa20.97■□□□□ 0.95
TRIM56-202ENST00000412507 PRDM6Q9NQX0 595 aa20.97■□□□□ 0.95
TRIM56-202ENST00000412507 TMEM161AQ9NX61 479 aa20.97■□□□□ 0.95
TRIM56-202ENST00000412507 DBR1Q9UK59 544 aaKnown RBP20.97■□□□□ 0.95
TRIM56-202ENST00000412507 MRPL42Q9Y6G3 142 aaKnown RBP20.97■□□□□ 0.95
TRIM56-202ENST00000412507 PP2D1A8MPX8 630 aa20.96■□□□□ 0.95
TRIM56-202ENST00000412507 PDCP20941 246 aa20.96■□□□□ 0.95
TRIM56-202ENST00000412507 ATP2C1P98194 919 aaPredicted RBP20.96■□□□□ 0.95
TRIM56-202ENST00000412507 GPM6BQ13491 265 aa20.96■□□□□ 0.95
TRIM56-202ENST00000412507 MAEAQ7L5Y9 396 aa20.96■□□□□ 0.95
TRIM56-202ENST00000412507 PHF6Q8IWS0 365 aaKnown RBP eCLIP20.96■□□□□ 0.95
TRIM56-202ENST00000412507 RNF149Q8NC42 400 aa20.96■□□□□ 0.95
TRIM56-202ENST00000412507 ASAP3Q8TDY4 903 aa20.96■□□□□ 0.95
TRIM56-202ENST00000412507 SNX29Q8TEQ0 813 aa20.96■□□□□ 0.95
TRIM56-202ENST00000412507 CLP1Q92989 425 aaKnown RBP20.96■□□□□ 0.95
TRIM56-202ENST00000412507 INTS4Q96HW7 963 aaKnown RBP20.96■□□□□ 0.95
TRIM56-202ENST00000412507 ELAC1Q9H777 363 aaKnown RBP20.96■□□□□ 0.95
TRIM56-202ENST00000412507 CHST12Q9NRB3 414 aa20.96■□□□□ 0.95
TRIM56-202ENST00000412507 TBKBP1A7MCY6 615 aa20.95■□□□□ 0.94
TRIM56-202ENST00000412507 H3BNC9 293 aa20.95■□□□□ 0.94
TRIM56-202ENST00000412507 FGFR1P11362 822 aa20.95■□□□□ 0.94
TRIM56-202ENST00000412507 MUTP22033 750 aa20.95■□□□□ 0.94
TRIM56-202ENST00000412507 ARL2P36404 184 aa20.95■□□□□ 0.94
TRIM56-202ENST00000412507 BMPR1AP36894 532 aa20.95■□□□□ 0.94
TRIM56-202ENST00000412507 MXD4Q14582 209 aaPredicted RBP20.95■□□□□ 0.94
TRIM56-202ENST00000412507 SRGAP1Q7Z6B7 1085 aa20.95■□□□□ 0.94
TRIM56-202ENST00000412507 ECHDC2Q86YB7 292 aa20.95■□□□□ 0.94
TRIM56-202ENST00000412507 RNF169Q8NCN4 708 aa20.95■□□□□ 0.94
TRIM56-202ENST00000412507 SNX21Q969T3 373 aa20.95■□□□□ 0.94
TRIM56-202ENST00000412507 POLR3FQ9H1D9 316 aaPredicted RBP20.95■□□□□ 0.94
TRIM56-202ENST00000412507 DACT1Q9NYF0 836 aa20.95■□□□□ 0.94
TRIM56-202ENST00000412507 LMCD1Q9NZU5 365 aa20.95■□□□□ 0.94
TRIM56-202ENST00000412507 KIAA1024Q9UPX6 916 aa20.95■□□□□ 0.94
TRIM56-202ENST00000412507 PIN4Q9Y237 131 aaKnown RBP20.95■□□□□ 0.94
TRIM56-202ENST00000412507 RWDD3Q9Y3V2 267 aa20.95■□□□□ 0.94
TRIM56-202ENST00000412507 TDRD15B5MCY1 1934 aaKnown RBP20.95■□□□□ 0.94
TRIM56-202ENST00000412507 TCF20Q9UGU0 1960 aaKnown RBP20.95■□□□□ 0.94
TRIM56-202ENST00000412507 SYT1P21579 422 aa20.94■□□□□ 0.94
TRIM56-202ENST00000412507 CDC25AP30304 524 aa20.94■□□□□ 0.94
TRIM56-202ENST00000412507 PHKA2P46019 1235 aa20.94■□□□□ 0.94
TRIM56-202ENST00000412507 CAPSQ13938 189 aa20.94■□□□□ 0.94
TRIM56-202ENST00000412507 BRAPQ7Z569 592 aa20.94■□□□□ 0.94
TRIM56-202ENST00000412507 GPRC5CQ9NQ84 441 aa20.94■□□□□ 0.94
TRIM56-202ENST00000412507 DDX19AQ9NUU7 478 aaKnown RBP20.94■□□□□ 0.94
TRIM56-202ENST00000412507 STK24Q9Y6E0 443 aa20.94■□□□□ 0.94
TRIM56-202ENST00000412507 A0A0U1RQF3 1178 aa20.93■□□□□ 0.94
TRIM56-202ENST00000412507 ARHGEF35A5YM69 484 aa20.93■□□□□ 0.94
TRIM56-202ENST00000412507 C5orf67F2Z3F1 127 aa20.93■□□□□ 0.94
TRIM56-202ENST00000412507 RB1P06400 928 aa20.93■□□□□ 0.94
TRIM56-202ENST00000412507 GLRA2P23416 452 aa20.93■□□□□ 0.94
TRIM56-202ENST00000412507 TFDP1Q14186 410 aa20.93■□□□□ 0.94
TRIM56-202ENST00000412507 KRT79Q5XKE5 535 aa20.93■□□□□ 0.94
TRIM56-202ENST00000412507 TWF2Q6IBS0 349 aaKnown RBP20.93■□□□□ 0.94
TRIM56-202ENST00000412507 PADI6Q6TGC4 694 aa20.93■□□□□ 0.94
TRIM56-202ENST00000412507 RNF19AQ9NV58 838 aa20.93■□□□□ 0.94
TRIM56-202ENST00000412507 VWA3AA6NCI4 1184 aa20.92■□□□□ 0.94
TRIM56-202ENST00000412507 ATF7P17544 494 aaPredicted RBP20.92■□□□□ 0.94
TRIM56-202ENST00000412507 PTENP60484 403 aa20.92■□□□□ 0.94
TRIM56-202ENST00000412507 ZNF598Q86UK7 904 aaKnown RBP20.92■□□□□ 0.94
TRIM56-202ENST00000412507 MCPH1Q8NEM0 835 aa20.92■□□□□ 0.94
TRIM56-202ENST00000412507 MMTAG2Q9BU76 263 aaKnown RBP20.92■□□□□ 0.94
TRIM56-202ENST00000412507 BHMT2Q9H2M3 363 aa20.92■□□□□ 0.94
TRIM56-202ENST00000412507 AGPAT5Q9NUQ2 364 aa20.92■□□□□ 0.94
TRIM56-202ENST00000412507 HCSTQ9UBK5 93 aa20.92■□□□□ 0.94
TRIM56-202ENST00000412507 TRIP11Q15643 1979 aa20.92■□□□□ 0.94
TRIM56-202ENST00000412507 A0A0C4DFX4 3053 aa20.91■□□□□ 0.94
TRIM56-202ENST00000412507 E9PMD0 336 aa20.91■□□□□ 0.94
TRIM56-202ENST00000412507 HOXA2O43364 376 aa20.91■□□□□ 0.94
TRIM56-202ENST00000412507 EOMESO95936 686 aa20.91■□□□□ 0.94
TRIM56-202ENST00000412507 POU5F1BQ06416 359 aa20.91■□□□□ 0.94
TRIM56-202ENST00000412507 SKIV2LQ15477 1246 aaKnown RBP20.91■□□□□ 0.94
TRIM56-202ENST00000412507 SPOUT1Q5T280 376 aaKnown RBP20.91■□□□□ 0.94
TRIM56-202ENST00000412507 ARL6IP4Q66PJ3 421 aaKnown RBP20.91■□□□□ 0.94
TRIM56-202ENST00000412507 IFNLR1Q8IU57 520 aaPredicted RBP20.91■□□□□ 0.94
TRIM56-202ENST00000412507 MRPL38Q96DV4 380 aaKnown RBP20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms