RNA–Protein interactions for RNA: ENST00000412157.2

SNRNP35-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

TSL 1 (best) BASIC

Gene SNRNP35, Length 1,140 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-202ENST00000412157 UBXN1Q04323 297 aa12.76□□□□□ -0.37
SNRNP35-202ENST00000412157 TRIM14Q14142 442 aa12.76□□□□□ -0.37
SNRNP35-202ENST00000412157 TARBP2Q15633 366 aaKnown RBP12.76□□□□□ -0.37
SNRNP35-202ENST00000412157 CCL14Q16627 93 aa12.76□□□□□ -0.37
SNRNP35-202ENST00000412157 NFIL3Q16649 462 aa12.76□□□□□ -0.37
SNRNP35-202ENST00000412157 MFSD14CQ5VZR4 134 aa12.76□□□□□ -0.37
SNRNP35-202ENST00000412157 TCP11Q8WWU5 503 aa12.76□□□□□ -0.37
SNRNP35-202ENST00000412157 EEF2KMTQ96G04 330 aa12.76□□□□□ -0.37
SNRNP35-202ENST00000412157 FLRT1Q9NZU1 646 aa12.76□□□□□ -0.37
SNRNP35-202ENST00000412157 FAM184BQ9ULE4 1060 aa12.76□□□□□ -0.37
SNRNP35-202ENST00000412157 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP12.76□□□□□ -0.37
SNRNP35-202ENST00000412157 ITIH6Q6UXX5 1313 aa12.76□□□□□ -0.37
SNRNP35-202ENST00000412157 TEX33O43247 280 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 FKTNO75072 461 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 MAFO75444 373 aaPredicted RBP12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 COL1A2P08123 1366 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 ZNF865P0CJ78 1059 aaPredicted RBP12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 XRCC5P13010 732 aaKnown RBP12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 SFPQP23246 707 aaKnown RBP eCLIP12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 CYP2C19P33261 490 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 HOXD13P35453 343 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 NAMPTP43490 491 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 NPTX2P47972 431 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 SNRPFP62306 86 aaKnown RBP12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 GTF2BQ00403 316 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 SP3Q02447 781 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 PPP2R3AQ06190 1150 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 DGKDQ16760 1214 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 BRDTQ58F21 947 aaPredicted RBP12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 ZNF484Q5JVG2 852 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 PRAMEF19Q5SWL8 479 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 IER5Q5VY09 327 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 CEP135Q66GS9 1140 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 FBXO46Q6PJ61 603 aaPredicted RBP12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 TLK2Q86UE8 772 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 ZSCAN30Q86W11 494 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 PPFIBP1Q86W92 1011 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 KSR1Q8IVT5 923 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 DEPTORQ8TB45 409 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 STRA6Q9BX79 667 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 AP5M1Q9H0R1 490 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 METTL14Q9HCE5 456 aaKnown RBP12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 ZKSCAN5Q9Y2L8 839 aa12.75□□□□□ -0.37
SNRNP35-202ENST00000412157 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.75□□□□□ -0.373e-11■■■□□ 17.2
SNRNP35-202ENST00000412157 A0A1W2PQC6 194 aa12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 DENND3A2RUS2 1198 aa12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 CLIC2O15247 247 aa12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 TGFB1I1O43294 461 aa12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 PPFIA4O75335 1185 aa12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 CTGFP29279 349 aa12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 ARL2P36404 184 aa12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 PBX1P40424 430 aa12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 MARSP56192 900 aaKnown RBP12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 KCNA1Q09470 495 aa12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 MYBPC2Q14324 1141 aa12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 VWA3BQ502W6 1294 aa12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 FRMD5Q7Z6J6 570 aa12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 TMEM161BQ8NDZ6 487 aa12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 BSNDQ8WZ55 320 aa12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 TMEM143Q96AN5 459 aa12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 PCMTD1Q96MG8 357 aaPredicted RBP12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 CEP89Q96ST8 783 aa12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 NTPCRQ9BSD7 190 aaKnown RBP12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 MKNK1Q9BUB5 465 aa12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 CFHR5Q9BXR6 569 aa12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 ARHGAP39Q9C0H5 1083 aa12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 AGPAT3Q9NRZ7 376 aa12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 FRMD4BQ9Y2L6 1034 aa12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.74□□□□□ -0.37
SNRNP35-202ENST00000412157 LRRIQ4A6NIV6 560 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 ESPNB1AK53 854 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 H3BRB1 525 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 DYNC1LI2O43237 492 aaPredicted RBP12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 ZNF286BP0CG31 522 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 HOXD8P13378 290 aaPredicted RBP12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 AKR1A1P14550 325 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 GLRA2P23416 452 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 HOXD10P28358 340 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 PSMC2P35998 433 aaKnown RBP12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 CPT1AP50416 773 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 STRN3Q13033 797 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 PTPN21Q16825 1174 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 ARMCX5Q6P1M9 558 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 SLC9A9Q8IVB4 645 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 MAP4K3Q8IVH8 894 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 RETREG2Q8NC44 543 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 ASAP3Q8TDY4 903 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 PSPC1Q8WXF1 523 aaKnown RBP12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 BICD1Q96G01 975 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 ZNF830Q96NB3 372 aaPredicted RBP12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 KIFC3Q9BVG8 833 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 NDST4Q9H3R1 872 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 TUT1Q9H6E5 874 aaKnown RBP12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 SUGCTQ9HAC7 445 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 ARMCX3Q9UH62 379 aaPredicted RBP12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 TBX20Q9UMR3 447 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 GABRQQ9UN88 632 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 GNEQ9Y223 722 aaKnown RBP12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 Q9Y3F1 56 aa12.73□□□□□ -0.37
SNRNP35-202ENST00000412157 PHLPP2Q6ZVD8 1323 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms