RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 NLRP4Q96MN2 994 aa17.12■□□□□ 0.33
TRAPPC12-203ENST00000411973 SCLT1Q96NL6 688 aa17.12■□□□□ 0.33
TRAPPC12-203ENST00000411973 NFKBIZQ9BYH8 718 aa17.12■□□□□ 0.33
TRAPPC12-203ENST00000411973 INO80BQ9C086 356 aaPredicted RBP17.12■□□□□ 0.33
TRAPPC12-203ENST00000411973 GPRC5CQ9NQ84 441 aa17.12■□□□□ 0.33
TRAPPC12-203ENST00000411973 GPR182O15218 404 aa17.11■□□□□ 0.33
TRAPPC12-203ENST00000411973 SSBP05455 408 aaKnown RBP eCLIP17.11■□□□□ 0.33
TRAPPC12-203ENST00000411973 SRGAP2CP0DJJ0 459 aa17.11■□□□□ 0.33
TRAPPC12-203ENST00000411973 STAT6P42226 847 aa17.11■□□□□ 0.33
TRAPPC12-203ENST00000411973 CAPSQ13938 189 aa17.11■□□□□ 0.33
TRAPPC12-203ENST00000411973 TFDP1Q14186 410 aa17.11■□□□□ 0.33
TRAPPC12-203ENST00000411973 MCM6Q14566 821 aa17.11■□□□□ 0.33
TRAPPC12-203ENST00000411973 E2F4Q16254 413 aa17.11■□□□□ 0.33
TRAPPC12-203ENST00000411973 ARSHQ5FYA8 562 aa17.11■□□□□ 0.33
TRAPPC12-203ENST00000411973 MAEAQ7L5Y9 396 aa17.11■□□□□ 0.33
TRAPPC12-203ENST00000411973 SRGAP1Q7Z6B7 1085 aa17.11■□□□□ 0.33
TRAPPC12-203ENST00000411973 FAM228AQ86W67 206 aa17.11■□□□□ 0.33
TRAPPC12-203ENST00000411973 ZNF668Q96K58 619 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC12-203ENST00000411973 RNPC3Q96LT9 517 aaKnown RBP17.11■□□□□ 0.33
TRAPPC12-203ENST00000411973 FTHL17Q9BXU8 183 aa17.11■□□□□ 0.33
TRAPPC12-203ENST00000411973 PANK2Q9BZ23 570 aa17.11■□□□□ 0.33
TRAPPC12-203ENST00000411973 C17orf75Q9HAS0 396 aa17.11■□□□□ 0.33
TRAPPC12-203ENST00000411973 ERVK-5Q9HDB9 667 aa17.11■□□□□ 0.33
TRAPPC12-203ENST00000411973 FAM13BQ9NYF5 915 aa17.11■□□□□ 0.33
TRAPPC12-203ENST00000411973 CXXC1Q9P0U4 656 aaPredicted RBP17.11■□□□□ 0.33
TRAPPC12-203ENST00000411973 ST3GAL5Q9UNP4 418 aa17.11■□□□□ 0.33
TRAPPC12-203ENST00000411973 HIP1RO75146 1068 aa17.1■□□□□ 0.33
TRAPPC12-203ENST00000411973 PHKA2P46019 1235 aa17.1■□□□□ 0.33
TRAPPC12-203ENST00000411973 PTENP60484 403 aa17.1■□□□□ 0.33
TRAPPC12-203ENST00000411973 DAW1Q8N136 415 aa17.1■□□□□ 0.33
TRAPPC12-203ENST00000411973 PDILTQ8N807 584 aa17.1■□□□□ 0.33
TRAPPC12-203ENST00000411973 DRC1Q96MC2 740 aa17.1■□□□□ 0.33
TRAPPC12-203ENST00000411973 PYM1Q9BRP8 204 aaKnown RBP17.1■□□□□ 0.33
TRAPPC12-203ENST00000411973 CUEDC2Q9H467 287 aa17.1■□□□□ 0.33
TRAPPC12-203ENST00000411973 GDPD2Q9HCC8 539 aa17.1■□□□□ 0.33
TRAPPC12-203ENST00000411973 TTC3P53804 2025 aa17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 FAM237AA0A1B0GTK4 181 aa17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 A0A1W2PQ27 194 aa17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 A0A1W2PQ64 194 aa17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 A0A1W2PQD8 194 aa17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 RBAK-RBAKDNI3L0D1 243 aa17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 SFPQP23246 707 aaKnown RBP eCLIP17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 NAMPTP43490 491 aa17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 WDR5P61964 334 aaKnown RBP17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 NFX1Q12986 1120 aaKnown RBP17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 MAPK7Q13164 816 aa17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 PPP2R5AQ15172 486 aa17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 PCBP1Q15365 356 aaKnown RBP eCLIP17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 LRIT3Q3SXY7 679 aa17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 SV2BQ7L1I2 683 aa17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 GPBP1Q86WP2 473 aa17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 IQUBQ8NA54 791 aa17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 BSNDQ8WZ55 320 aa17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 TMX1Q9H3N1 280 aa17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 KCNH3Q9ULD8 1083 aa17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 ODF2LQ9ULJ1 636 aa17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 SLC4A7Q9Y6M7 1214 aa17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 PTPRSQ13332 1948 aa17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 LAMA2P24043 3122 aaKnown RBP17.09■□□□□ 0.33
TRAPPC12-203ENST00000411973 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC12-203ENST00000411973 ZBBXA8MT70 800 aa17.08■□□□□ 0.32
TRAPPC12-203ENST00000411973 POLR2DO15514 142 aaKnown RBP17.08■□□□□ 0.32
TRAPPC12-203ENST00000411973 DHX8Q14562 1220 aaKnown RBP17.08■□□□□ 0.32
TRAPPC12-203ENST00000411973 CDCA2Q69YH5 1023 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC12-203ENST00000411973 PHOSPHO2Q8TCD6 241 aa17.08■□□□□ 0.32
TRAPPC12-203ENST00000411973 IFT74Q96LB3 600 aa17.08■□□□□ 0.32
TRAPPC12-203ENST00000411973 SLC9A7Q96T83 725 aa17.08■□□□□ 0.32
TRAPPC12-203ENST00000411973 TSPYL2Q9H2G4 693 aaPredicted RBP17.08■□□□□ 0.32
TRAPPC12-203ENST00000411973 MINDY3Q9H8M7 445 aa17.08■□□□□ 0.32
TRAPPC12-203ENST00000411973 KCNG1Q9UIX4 513 aa17.08■□□□□ 0.32
TRAPPC12-203ENST00000411973 HPSEQ9Y251 543 aa17.08■□□□□ 0.32
TRAPPC12-203ENST00000411973 ENPP3O14638 875 aa17.07■□□□□ 0.32
TRAPPC12-203ENST00000411973 CSDE1O75534 798 aaKnown RBP17.07■□□□□ 0.32
TRAPPC12-203ENST00000411973 KCNJ6P48051 423 aa17.07■□□□□ 0.32
TRAPPC12-203ENST00000411973 ZNF131P52739 623 aa17.07■□□□□ 0.32
TRAPPC12-203ENST00000411973 MBTD1Q05BQ5 628 aa17.07■□□□□ 0.32
TRAPPC12-203ENST00000411973 RAD51AP2Q09MP3 1159 aa17.07■□□□□ 0.32
TRAPPC12-203ENST00000411973 GIT2Q14161 759 aa17.07■□□□□ 0.32
TRAPPC12-203ENST00000411973 DSC3Q14574 896 aa17.07■□□□□ 0.32
TRAPPC12-203ENST00000411973 RTN4RL1Q86UN2 441 aaPredicted RBP17.07■□□□□ 0.32
TRAPPC12-203ENST00000411973 DHX58Q96C10 678 aa17.07■□□□□ 0.32
TRAPPC12-203ENST00000411973 REEP2Q9BRK0 252 aa17.07■□□□□ 0.32
TRAPPC12-203ENST00000411973 NTPCRQ9BSD7 190 aaKnown RBP17.07■□□□□ 0.32
TRAPPC12-203ENST00000411973 C2orf40Q9H1Z8 148 aa17.07■□□□□ 0.32
TRAPPC12-203ENST00000411973 TNMDQ9H2S6 317 aa17.07■□□□□ 0.32
TRAPPC12-203ENST00000411973 MAGEF1Q9HAY2 307 aa17.07■□□□□ 0.32
TRAPPC12-203ENST00000411973 POLD4Q9HCU8 107 aa17.07■□□□□ 0.32
TRAPPC12-203ENST00000411973 CHST12Q9NRB3 414 aa17.07■□□□□ 0.32
TRAPPC12-203ENST00000411973 KBTBD4Q9NVX7 518 aa17.07■□□□□ 0.32
TRAPPC12-203ENST00000411973 NPHP3-ACAD11A0A0J9YXS1 232 aa17.06■□□□□ 0.32
TRAPPC12-203ENST00000411973 A0A1B0GVL5 298 aa17.06■□□□□ 0.32
TRAPPC12-203ENST00000411973 MYMKA6NI61 221 aa17.06■□□□□ 0.32
TRAPPC12-203ENST00000411973 LRRIQ4A6NIV6 560 aa17.06■□□□□ 0.32
TRAPPC12-203ENST00000411973 AMHP03971 560 aa17.06■□□□□ 0.32
TRAPPC12-203ENST00000411973 PLS3P13797 630 aa17.06■□□□□ 0.32
TRAPPC12-203ENST00000411973 PFKFB1P16118 471 aa17.06■□□□□ 0.32
TRAPPC12-203ENST00000411973 FGFR4P22455 802 aa17.06■□□□□ 0.32
TRAPPC12-203ENST00000411973 NPTX2P47972 431 aa17.06■□□□□ 0.32
TRAPPC12-203ENST00000411973 PEX3P56589 373 aa17.06■□□□□ 0.32
TRAPPC12-203ENST00000411973 DMP1Q13316 513 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms