RNA–Protein interactions for RNA: ENST00000407439.7

MRE11-204, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 2 BASIC

Gene MRE11, Length 2,684 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-204ENST00000407439 CDHR1Q96JP9 859 aa6.99□□□□□ -1.29
MRE11-204ENST00000407439 CCDC43Q96MW1 224 aaKnown RBP6.99□□□□□ -1.29
MRE11-204ENST00000407439 OSBPL9Q96SU4 736 aa6.99□□□□□ -1.29
MRE11-204ENST00000407439 RHOXF2Q9BQY4 288 aa6.99□□□□□ -1.29
MRE11-204ENST00000407439 IKZF4Q9H2S9 585 aa6.99□□□□□ -1.29
MRE11-204ENST00000407439 RNF14Q9UBS8 474 aa6.99□□□□□ -1.29
MRE11-204ENST00000407439 L1RE1Q9UN81 338 aa6.99□□□□□ -1.29
MRE11-204ENST00000407439 F8VZ95 297 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 PDE2AO00408 941 aaPredicted RBP6.98□□□□□ -1.29
MRE11-204ENST00000407439 PMM2O15305 246 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 P4HA2O15460 535 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 EXOC3O60645 756 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 NR3C2P08235 984 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 FERP16591 822 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 KLRC1P26715 233 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 NCKAP1LP55160 1127 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 FAM193AP78312 1265 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 ARID5AQ03989 594 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 CBWD6Q4V339 395 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 CBWD3Q5JTY5 395 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 CBWD5Q5RIA9 395 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 CATSPERGQ6ZRH7 1159 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 NLRX1Q86UT6 975 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 KSR1Q8IVT5 923 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 SYCP3Q8IZU3 236 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 CAGE1Q8TC20 777 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 HVCN1Q96D96 273 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 CAPZA3Q96KX2 299 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 ACCSQ96QU6 501 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 MOV10L1Q9BXT6 1211 aaKnown RBP6.98□□□□□ -1.29
MRE11-204ENST00000407439 STK33Q9BYT3 514 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 C17orf75Q9HAS0 396 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 GPBP1L1Q9HC44 474 aaPredicted RBP6.98□□□□□ -1.29
MRE11-204ENST00000407439 GGA3Q9NZ52 723 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 APEX2Q9UBZ4 518 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 NAGPAQ9UK23 515 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 INTUQ9ULD6 942 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 PCDHA10Q9Y5I2 948 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 BACH1O14867 736 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 ZNF185O15231 689 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 DKC1O60832 514 aaKnown RBP eCLIP6.98□□□□□ -1.29
MRE11-204ENST00000407439 N4BP1O75113 896 aaKnown RBP6.98□□□□□ -1.29
MRE11-204ENST00000407439 MYCLP12524 364 aaPredicted RBP6.98□□□□□ -1.29
MRE11-204ENST00000407439 KCNA2P16389 499 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 CYP2J2P51589 502 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 MYL7Q01449 175 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 TMEM132BQ14DG7 1078 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 GPIHBP1Q8IV16 184 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 ANKRD13CQ8N6S4 541 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.98□□□□□ -1.29
MRE11-204ENST00000407439 COG1Q8WTW3 980 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP6.98□□□□□ -1.29
MRE11-204ENST00000407439 ACAD9Q9H845 621 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 NFASCO94856 1347 aa6.98□□□□□ -1.29
MRE11-204ENST00000407439 A0A0A6YYK5 440 aaPredicted RBP6.97□□□□□ -1.29
MRE11-204ENST00000407439 SPDYE16A6NNV3 312 aaPredicted RBP6.97□□□□□ -1.29
MRE11-204ENST00000407439 RGS20O76081 388 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 CCDC172P0C7W6 258 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 STAT1P42224 750 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 IFI16Q16666 785 aaKnown RBP6.97□□□□□ -1.29
MRE11-204ENST00000407439 GNPTABQ3T906 1256 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 SUPT20HL1Q3ZLR7 823 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 MAP9Q49MG5 647 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 SH3D19Q5HYK7 790 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 NFRKBQ6P4R8 1299 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 ALKBH5Q6P6C2 394 aaKnown RBP6.97□□□□□ -1.29
MRE11-204ENST00000407439 ANO5Q75V66 913 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 HDXQ7Z353 690 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 HAUS6Q7Z4H7 955 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 MAP4K3Q8IVH8 894 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 MMGT1Q8N4V1 131 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 SPATA4Q8NEY3 305 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 FBXO22Q8NEZ5 403 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 UBE2Q2Q8WVN8 375 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 ATP6V0A1Q93050 837 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 SYT11Q9BT88 431 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 A1CFQ9NQ94 594 aaKnown RBP6.97□□□□□ -1.29
MRE11-204ENST00000407439 HOXC10Q9NYD6 342 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 CYP39A1Q9NYL5 469 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 TMOD4Q9NZQ9 345 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 AJAP1Q9UKB5 411 aaPredicted RBP6.97□□□□□ -1.29
MRE11-204ENST00000407439 AFG3L2Q9Y4W6 797 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 LOC285556D6RIA3 1793 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 PITPNM1O00562 1244 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 CES2O00748 559 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 BUB1O43683 1085 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 EVI5O60447 810 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 TRIM49P0CI25 452 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 TRIM49CP0CI26 452 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 KRT13P13646 458 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 SOX5P35711 763 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 RTP1P59025 263 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 CETN1Q12798 172 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 DMP1Q13316 513 aaPredicted RBP6.97□□□□□ -1.29
MRE11-204ENST00000407439 R3HDM1Q15032 1099 aaKnown RBP6.97□□□□□ -1.29
MRE11-204ENST00000407439 UTP14CQ5TAP6 766 aaKnown RBP6.97□□□□□ -1.29
MRE11-204ENST00000407439 CCDC70Q6NSX1 233 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 CHADLQ6NUI6 762 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 OTUD6AQ7L8S5 288 aa6.97□□□□□ -1.29
MRE11-204ENST00000407439 EFCAB3Q8N7B9 438 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms