RNA–Protein interactions for RNA: ENST00000400772.6

ATG4B-203, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 625 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-203ENST00000400772 NLRP4Q96MN2 994 aa17.72■□□□□ 0.43
ATG4B-203ENST00000400772 CASD1Q96PB1 797 aa17.72■□□□□ 0.43
ATG4B-203ENST00000400772 NSUN3Q9H649 340 aaKnown RBP17.72■□□□□ 0.43
ATG4B-203ENST00000400772 CWH43Q9H720 699 aa17.72■□□□□ 0.43
ATG4B-203ENST00000400772 UBE2ZQ9H832 354 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-203ENST00000400772 XPNPEP1Q9NQW7 623 aa17.72■□□□□ 0.43
ATG4B-203ENST00000400772 CHST12Q9NRB3 414 aa17.72■□□□□ 0.43
ATG4B-203ENST00000400772 BMP2KQ9NSY1 1161 aaPredicted RBP17.72■□□□□ 0.43
ATG4B-203ENST00000400772 TYW1Q9NV66 732 aaKnown RBP17.72■□□□□ 0.43
ATG4B-203ENST00000400772 COL4A3BPQ9Y5P4 624 aa17.72■□□□□ 0.43
ATG4B-203ENST00000400772 CUL9Q8IWT3 2517 aa17.71■□□□□ 0.43
ATG4B-203ENST00000400772 ATG2AQ2TAZ0 1938 aa17.71■□□□□ 0.43
ATG4B-203ENST00000400772 ST18O60284 1047 aa17.71■□□□□ 0.43
ATG4B-203ENST00000400772 SPATA31C1P0DKV0 1188 aa17.71■□□□□ 0.43
ATG4B-203ENST00000400772 ATF7P17544 494 aaPredicted RBP17.71■□□□□ 0.43
ATG4B-203ENST00000400772 U2AF2P26368 475 aaKnown RBP eCLIP17.71■□□□□ 0.433e-9■■□□□ 14.1
ATG4B-203ENST00000400772 COL19A1Q14993 1142 aa17.71■□□□□ 0.43
ATG4B-203ENST00000400772 EMC2Q15006 297 aa17.71■□□□□ 0.43
ATG4B-203ENST00000400772 NOSTRINQ8IVI9 506 aa17.71■□□□□ 0.43
ATG4B-203ENST00000400772 C4orf32Q8N8J7 132 aa17.71■□□□□ 0.43
ATG4B-203ENST00000400772 NEK9Q8TD19 979 aa17.71■□□□□ 0.43
ATG4B-203ENST00000400772 NECAB3Q96P71 396 aaPredicted RBP17.71■□□□□ 0.43
ATG4B-203ENST00000400772 BRWD1Q9NSI6 2320 aa17.71■□□□□ 0.43
ATG4B-203ENST00000400772 SRGAP2CP0DJJ0 459 aa17.7■□□□□ 0.42
ATG4B-203ENST00000400772 SFPQP23246 707 aaKnown RBP eCLIP17.7■□□□□ 0.42
ATG4B-203ENST00000400772 TOB1P50616 345 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-203ENST00000400772 LAMTOR4Q0VGL1 99 aa17.7■□□□□ 0.42
ATG4B-203ENST00000400772 NBR1Q14596 966 aa17.7■□□□□ 0.42
ATG4B-203ENST00000400772 CLLU1OSQ5K130 101 aa17.7■□□□□ 0.42
ATG4B-203ENST00000400772 TTC38Q5R3I4 469 aa17.7■□□□□ 0.42
ATG4B-203ENST00000400772 FERMT3Q86UX7 667 aa17.7■□□□□ 0.42
ATG4B-203ENST00000400772 PSPC1Q8WXF1 523 aaKnown RBP17.7■□□□□ 0.42
ATG4B-203ENST00000400772 TMX3Q96JJ7 454 aa17.7■□□□□ 0.42
ATG4B-203ENST00000400772 TBC1D32Q96NH3 1257 aa17.7■□□□□ 0.42
ATG4B-203ENST00000400772 UHRF1Q96T88 793 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-203ENST00000400772 TRAIPQ9BWF2 469 aa17.7■□□□□ 0.42
ATG4B-203ENST00000400772 INO80BQ9C086 356 aaPredicted RBP17.7■□□□□ 0.42
ATG4B-203ENST00000400772 TMEM117Q9H0C3 514 aa17.7■□□□□ 0.42
ATG4B-203ENST00000400772 MINDY3Q9H8M7 445 aa17.7■□□□□ 0.42
ATG4B-203ENST00000400772 ANKEF1Q9NU02 776 aa17.7■□□□□ 0.42
ATG4B-203ENST00000400772 GAS2O43903 313 aaKnown RBP17.69■□□□□ 0.42
ATG4B-203ENST00000400772 MED24O75448 989 aa17.69■□□□□ 0.42
ATG4B-203ENST00000400772 CSPG5O95196 566 aa17.69■□□□□ 0.42
ATG4B-203ENST00000400772 EOMESO95936 686 aa17.69■□□□□ 0.42
ATG4B-203ENST00000400772 IRS1P35568 1242 aa17.69■□□□□ 0.42
ATG4B-203ENST00000400772 TECP42680 631 aa17.69■□□□□ 0.42
ATG4B-203ENST00000400772 TRAPPC10P48553 1259 aa17.69■□□□□ 0.42
ATG4B-203ENST00000400772 RARRES1P49788 294 aa17.69■□□□□ 0.42
ATG4B-203ENST00000400772 ORC2Q13416 577 aaPredicted RBP17.69■□□□□ 0.42
ATG4B-203ENST00000400772 LEXMQ3ZCV2 418 aa17.69■□□□□ 0.42
ATG4B-203ENST00000400772 CATSPER3Q86XQ3 398 aa17.69■□□□□ 0.42
ATG4B-203ENST00000400772 IL27Q8NEV9 243 aa17.69■□□□□ 0.42
ATG4B-203ENST00000400772 PIGOQ8TEQ8 1089 aa17.69■□□□□ 0.42
ATG4B-203ENST00000400772 POF1BQ8WVV4 589 aa17.69■□□□□ 0.42
ATG4B-203ENST00000400772 TCP11Q8WWU5 503 aa17.69■□□□□ 0.42
ATG4B-203ENST00000400772 MTRQ99707 1265 aa17.69■□□□□ 0.42
ATG4B-203ENST00000400772 DACT1Q9NYF0 836 aa17.69■□□□□ 0.42
ATG4B-203ENST00000400772 TTC28Q96AY4 2481 aa17.69■□□□□ 0.42
ATG4B-203ENST00000400772 TNFRSF10AO00220 468 aa17.68■□□□□ 0.42
ATG4B-203ENST00000400772 ASAP2O43150 1006 aa17.68■□□□□ 0.42
ATG4B-203ENST00000400772 HOXA2O43364 376 aa17.68■□□□□ 0.42
ATG4B-203ENST00000400772 OR52Z1P0C646 297 aa17.68■□□□□ 0.42
ATG4B-203ENST00000400772 XRCC6P12956 609 aaKnown RBP eCLIP17.68■□□□□ 0.42
ATG4B-203ENST00000400772 KCNA5P22460 613 aa17.68■□□□□ 0.42
ATG4B-203ENST00000400772 HOXA11P31270 313 aaPredicted RBP17.68■□□□□ 0.42
ATG4B-203ENST00000400772 GTF2F1P35269 517 aaKnown RBP eCLIP17.68■□□□□ 0.422e-8■■■■■ 34.1
ATG4B-203ENST00000400772 PHKA2P46019 1235 aa17.68■□□□□ 0.42
ATG4B-203ENST00000400772 HYAL1Q12794 435 aa17.68■□□□□ 0.42
ATG4B-203ENST00000400772 SPOUT1Q5T280 376 aaKnown RBP17.68■□□□□ 0.42
ATG4B-203ENST00000400772 CATSPER4Q7RTX7 472 aa17.68■□□□□ 0.42
ATG4B-203ENST00000400772 SRGAP1Q7Z6B7 1085 aa17.68■□□□□ 0.42
ATG4B-203ENST00000400772 COLGALT1Q8NBJ5 622 aa17.68■□□□□ 0.42
ATG4B-203ENST00000400772 RNF169Q8NCN4 708 aa17.68■□□□□ 0.42
ATG4B-203ENST00000400772 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.68■□□□□ 0.42
ATG4B-203ENST00000400772 PABPC5Q96DU9 382 aaKnown RBP17.68■□□□□ 0.42
ATG4B-203ENST00000400772 UPF2Q9HAU5 1272 aaKnown RBP17.68■□□□□ 0.42
ATG4B-203ENST00000400772 PIN4Q9Y237 131 aaKnown RBP17.68■□□□□ 0.42
ATG4B-203ENST00000400772 PCDHB12Q9Y5F1 795 aa17.68■□□□□ 0.42
ATG4B-203ENST00000400772 ARID2Q68CP9 1835 aa17.68■□□□□ 0.42
ATG4B-203ENST00000400772 DGAT1O75907 488 aa17.67■□□□□ 0.42
ATG4B-203ENST00000400772 ARL2P36404 184 aa17.67■□□□□ 0.42
ATG4B-203ENST00000400772 LTBRP36941 435 aa17.67■□□□□ 0.42
ATG4B-203ENST00000400772 GNL2Q13823 731 aaKnown RBP17.67■□□□□ 0.42
ATG4B-203ENST00000400772 CTC1Q2NKJ3 1217 aa17.67■□□□□ 0.42
ATG4B-203ENST00000400772 TWF2Q6IBS0 349 aaKnown RBP17.67■□□□□ 0.42
ATG4B-203ENST00000400772 RNF149Q8NC42 400 aa17.67■□□□□ 0.42
ATG4B-203ENST00000400772 HELQQ8TDG4 1101 aa17.67■□□□□ 0.42
ATG4B-203ENST00000400772 ASAP3Q8TDY4 903 aa17.67■□□□□ 0.42
ATG4B-203ENST00000400772 POLR3CQ9BUI4 534 aaPredicted RBP17.67■□□□□ 0.42
ATG4B-203ENST00000400772 TUFT1Q9NNX1 390 aa17.67■□□□□ 0.42
ATG4B-203ENST00000400772 AAASQ9NRG9 546 aa17.67■□□□□ 0.42
ATG4B-203ENST00000400772 AGPAT5Q9NUQ2 364 aa17.67■□□□□ 0.42
ATG4B-203ENST00000400772 MEIS3P2A8K0S8 358 aa17.66■□□□□ 0.42
ATG4B-203ENST00000400772 H3BQ06 376 aaPredicted RBP17.66■□□□□ 0.42
ATG4B-203ENST00000400772 ZNF623O75123 536 aa17.66■□□□□ 0.42
ATG4B-203ENST00000400772 FGF18O76093 207 aa17.66■□□□□ 0.42
ATG4B-203ENST00000400772 LAG3P18627 525 aa17.66■□□□□ 0.42
ATG4B-203ENST00000400772 PTENP60484 403 aa17.66■□□□□ 0.42
ATG4B-203ENST00000400772 ADGRD2Q7Z7M1 963 aa17.66■□□□□ 0.42
ATG4B-203ENST00000400772 LPPQ93052 612 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms