RNA–Protein interactions for RNA: ENST00000400556.7

PPP4R1-203, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPP4R1, Length 3,925 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-203ENST00000400556 GOLGA8IPA6NC78 632 aa11.45□□□□□ -0.58
PPP4R1-203ENST00000400556 GOLGA8JA6NMD2 632 aa11.45□□□□□ -0.58
PPP4R1-203ENST00000400556 BBOX1O75936 387 aa11.45□□□□□ -0.58
PPP4R1-203ENST00000400556 PSMC2P35998 433 aaKnown RBP11.45□□□□□ -0.58
PPP4R1-203ENST00000400556 PRKCIP41743 596 aa11.45□□□□□ -0.58
PPP4R1-203ENST00000400556 NT5C2P49902 561 aa11.45□□□□□ -0.58
PPP4R1-203ENST00000400556 SLC29A2Q14542 456 aa11.45□□□□□ -0.58
PPP4R1-203ENST00000400556 LRCH2Q5VUJ6 765 aa11.45□□□□□ -0.58
PPP4R1-203ENST00000400556 RUFY4Q6ZNE9 571 aa11.45□□□□□ -0.58
PPP4R1-203ENST00000400556 C15orf52Q6ZUT6 534 aaKnown RBP11.45□□□□□ -0.58
PPP4R1-203ENST00000400556 TAX1BP1Q86VP1 789 aa11.45□□□□□ -0.58
PPP4R1-203ENST00000400556 OLIG1Q8TAK6 271 aa11.45□□□□□ -0.58
PPP4R1-203ENST00000400556 EPS8L3Q8TE67 593 aaKnown RBP11.45□□□□□ -0.58
PPP4R1-203ENST00000400556 LMBR1Q8WVP7 490 aa11.45□□□□□ -0.58
PPP4R1-203ENST00000400556 ZNF622Q969S3 477 aaKnown RBP eCLIP11.45□□□□□ -0.589e-9■□□□□ 11
PPP4R1-203ENST00000400556 INTS2Q9H0H0 1204 aaKnown RBP11.45□□□□□ -0.58
PPP4R1-203ENST00000400556 UBE2TQ9NPD8 197 aaPredicted RBP11.45□□□□□ -0.58
PPP4R1-203ENST00000400556 SUCLA2Q9P2R7 463 aaPredicted RBP11.45□□□□□ -0.58
PPP4R1-203ENST00000400556 SWAP70Q9UH65 585 aa11.45□□□□□ -0.58
PPP4R1-203ENST00000400556 CD2APQ9Y5K6 639 aa11.45□□□□□ -0.58
PPP4R1-203ENST00000400556 PLIN4Q96Q06 1357 aa11.45□□□□□ -0.58
PPP4R1-203ENST00000400556 A0A1W2PRG0 241 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 DDX3YO15523 660 aaKnown RBP11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 FERP16591 822 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 RRP1BQ14684 758 aaKnown RBP11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 ZDHHC14Q8IZN3 488 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 RFFLQ8WZ73 363 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 PSMD1Q99460 953 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 TDRD3Q9H7E2 651 aaKnown RBP11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 DBR1Q9UK59 544 aaKnown RBP11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 ANKRD63C9JTQ0 380 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 SLITRK3O94933 977 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 CHN1P15882 459 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 C2CD6Q53TS8 623 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 ZC3H3Q8IXZ2 948 aaKnown RBP11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 RNF25Q96BH1 459 aaPredicted RBP11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 GPR88Q9GZN0 384 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 METTL14Q9HCE5 456 aaKnown RBP11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 ALG6Q9Y672 507 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 CCDC188H7C350 402 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 ECM2O94769 699 aaPredicted RBP11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 FSBPO95073 299 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 FTLP02792 175 aaPredicted RBP11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 VPS41P49754 854 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 MYL7Q01449 175 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 BYSLQ13895 437 aaKnown RBP11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 TRIP13Q15645 432 aaPredicted RBP11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 C10orf76Q5T2E6 689 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 SLFN11Q7Z7L1 901 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 JAMLQ86YT9 394 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 ARHGEF19Q8IW93 802 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 SUGP1Q8IWZ8 645 aaKnown RBP11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 CACNA2D3Q8IZS8 1091 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 FAM118BQ9BPY3 351 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 VCPKMTQ9H867 229 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 KLC4Q9NSK0 619 aa11.44□□□□□ -0.58
PPP4R1-203ENST00000400556 PPP1R12BO60237 982 aaPredicted RBP11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 SNX1Q13596 522 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 SYDE2Q5VT97 1194 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 HS2ST1Q7LGA3 356 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 CALR3Q96L12 384 aaKnown RBP11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 PARVGQ9HBI0 331 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 FAM198AQ9UFP1 575 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 EYA4O95677 639 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 ABCB5Q2M3G0 1257 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 DAB2IPQ5VWQ8 1189 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 LRIG3Q6UXM1 1119 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 ARHGAP27Q6ZUM4 889 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 SYCE1Q8N0S2 351 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 AGPAT3Q9NRZ7 376 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 USP21Q9UK80 565 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 FRMD4BQ9Y2L6 1034 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 EMSYQ7Z589 1322 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 CYP3A7-CYP3A51PA0A087WV96 503 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 MMEP08473 750 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 VIMP08670 466 aaKnown RBP11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 ARP10275 920 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 CYP3A7P24462 503 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 POU5F1Q01860 360 aaKnown RBP11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 EPC2Q52LR7 807 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 FAM133BQ5BKY9 247 aaKnown RBP11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 KIAA1755Q5JYT7 1200 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 MSL1Q68DK7 614 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 TTC27Q6P3X3 843 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 KIRREL3Q8IZU9 778 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 RASGEF1CQ8N431 466 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 ACER1Q8TDN7 264 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 CRYGNQ8WXF5 182 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 COA1Q9GZY4 146 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 SLITRK6Q9H5Y7 841 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 NHSQ6T4R5 1651 aa11.43□□□□□ -0.58
PPP4R1-203ENST00000400556 GAS7O60861 476 aa11.42□□□□□ -0.58
PPP4R1-203ENST00000400556 CREB1P16220 341 aa11.42□□□□□ -0.58
PPP4R1-203ENST00000400556 SREBF1P36956 1147 aa11.42□□□□□ -0.58
PPP4R1-203ENST00000400556 RPL21P46778 160 aaKnown RBP11.42□□□□□ -0.58
PPP4R1-203ENST00000400556 CDR1P51861 262 aa11.42□□□□□ -0.58
PPP4R1-203ENST00000400556 PMS2P54278 862 aa11.42□□□□□ -0.58
PPP4R1-203ENST00000400556 SETQ01105 290 aaPredicted RBP11.42□□□□□ -0.58
PPP4R1-203ENST00000400556 C6orf89Q6UWU4 347 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms