RNA–Protein interactions for RNA: ENST00000398527.6

MSL3-207, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 2,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-207ENST00000398527 ATP1A3P13637 1013 aa11.66□□□□□ -0.54
MSL3-207ENST00000398527 ATP5DP30049 168 aa11.66□□□□□ -0.54
MSL3-207ENST00000398527 TROAPQ12815 778 aa11.66□□□□□ -0.54
MSL3-207ENST00000398527 CBX3Q13185 183 aa11.66□□□□□ -0.54
MSL3-207ENST00000398527 BRD3Q15059 726 aa11.66□□□□□ -0.54
MSL3-207ENST00000398527 CFAP100Q494V2 611 aa11.66□□□□□ -0.54
MSL3-207ENST00000398527 LDLRAD1Q5T700 205 aa11.66□□□□□ -0.54
MSL3-207ENST00000398527 ZNF746Q6NUN9 644 aaPredicted RBP11.66□□□□□ -0.54
MSL3-207ENST00000398527 ENAHQ8N8S7 591 aaPredicted RBP11.66□□□□□ -0.54
MSL3-207ENST00000398527 ZFAND2BQ8WV99 257 aa11.66□□□□□ -0.54
MSL3-207ENST00000398527 LMBR1Q8WVP7 490 aa11.66□□□□□ -0.54
MSL3-207ENST00000398527 DCPSQ96C86 337 aaKnown RBP11.66□□□□□ -0.54
MSL3-207ENST00000398527 MAELQ96JY0 434 aaKnown RBP11.66□□□□□ -0.54
MSL3-207ENST00000398527 SPATA17Q96L03 361 aa11.66□□□□□ -0.54
MSL3-207ENST00000398527 NSRP1Q9H0G5 558 aaKnown RBP11.66□□□□□ -0.54
MSL3-207ENST00000398527 ATP8A2Q9NTI2 1148 aa11.66□□□□□ -0.54
MSL3-207ENST00000398527 ZNF215Q9UL58 517 aaPredicted RBP11.66□□□□□ -0.54
MSL3-207ENST00000398527 POLR2AP24928 1970 aaKnown RBP11.66□□□□□ -0.54
MSL3-207ENST00000398527 TNFRSF10BO14763 440 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 GFPT2O94808 682 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 HOXD12P35452 270 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 NAA25Q14CX7 972 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 TMTC3Q6ZXV5 915 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 ADGRA1Q86SQ6 560 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 TMEM139Q8IV31 216 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 MAB21L3Q8N8X9 362 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 ANKS1AQ92625 1134 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 DPF2Q92785 391 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 FANCLQ9NW38 375 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 PRKAG2Q9UGJ0 569 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 ZC3H7BQ9UGR2 993 aaKnown RBP11.65□□□□□ -0.54
MSL3-207ENST00000398527 CCPG1Q9ULG6 757 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 PHF24Q9UPV7 400 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 PCDHB6Q9Y5E3 794 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 MAGED1Q9Y5V3 778 aaPredicted RBP11.65□□□□□ -0.54
MSL3-207ENST00000398527 POLR2DO15514 142 aaKnown RBP11.65□□□□□ -0.54
MSL3-207ENST00000398527 SLC4A1P02730 911 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 IDO1P14902 403 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 RFX1P22670 979 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 HIBADHP31937 336 aaKnown RBP11.65□□□□□ -0.54
MSL3-207ENST00000398527 CUL3Q13618 768 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 SPECC1LQ69YQ0 1117 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 CATSPER4Q7RTX7 472 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 SAMD7Q7Z3H4 446 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 SPOCK2Q92563 424 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 ATP6V0A1Q93050 837 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 NAA15Q9BXJ9 866 aaKnown RBP11.65□□□□□ -0.54
MSL3-207ENST00000398527 INTS13Q9NVM9 706 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 SERTAD1Q9UHV2 236 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 KIAA1257Q9ULG3 409 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 KCNJ14Q9UNX9 436 aa11.65□□□□□ -0.54
MSL3-207ENST00000398527 SZT2Q5T011 3432 aa11.65□□□□□ -0.55
MSL3-207ENST00000398527 A0A1B0GTH6 734 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 KATNA1O75449 491 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 MYL3P08590 195 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 TMOD1P28289 359 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 NR1I3Q14994 352 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 IFIT1BQ5T764 474 aaKnown RBP11.64□□□□□ -0.55
MSL3-207ENST00000398527 PPP4R4Q6NUP7 873 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 REXO1L1PQ8IX06 675 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 STON2Q8WXE9 905 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 OTUD5Q96G74 571 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 PANX2Q96RD6 677 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 TCF12Q99081 682 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 CFHR5Q9BXR6 569 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 ARPP21Q9UBL0 812 aaPredicted RBP11.64□□□□□ -0.55
MSL3-207ENST00000398527 IRS2Q9Y4H2 1338 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 BAZ2AQ9UIF9 1905 aaKnown RBP11.64□□□□□ -0.55
MSL3-207ENST00000398527 WTIPA6NIX2 430 aaPredicted RBP11.64□□□□□ -0.55
MSL3-207ENST00000398527 BCRP11274 1271 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 FECHP22830 423 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 CASP2P42575 452 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 MNX1P50219 401 aaPredicted RBP11.64□□□□□ -0.55
MSL3-207ENST00000398527 ATP2C1P98194 919 aaPredicted RBP11.64□□□□□ -0.55
MSL3-207ENST00000398527 MAP7Q14244 749 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 SPATA1Q5VX52 437 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 ISM2Q6H9L7 571 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 TRIM65Q6PJ69 517 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 DSTYKQ6XUX3 929 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 SPERTQ8NA61 448 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 CDCA5Q96FF9 252 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 RBM18Q96H35 190 aaKnown RBP11.64□□□□□ -0.55
MSL3-207ENST00000398527 POLMQ9NP87 494 aaPredicted RBP11.64□□□□□ -0.55
MSL3-207ENST00000398527 TCP11L1Q9NUJ3 509 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 DNAI1Q9UI46 699 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 NFE2L3Q9Y4A8 694 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 GMEB1Q9Y692 573 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 ITIH6Q6UXX5 1313 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 CNTNAP5Q8WYK1 1306 aa11.64□□□□□ -0.55
MSL3-207ENST00000398527 FRMD3A2A2Y4 597 aa11.63□□□□□ -0.55
MSL3-207ENST00000398527 ABLIM1O14639 778 aa11.63□□□□□ -0.55
MSL3-207ENST00000398527 PRMT3O60678 531 aa11.63□□□□□ -0.55
MSL3-207ENST00000398527 KRT10P13645 584 aa11.63□□□□□ -0.55
MSL3-207ENST00000398527 H2AFXP16104 143 aaPredicted RBP11.63□□□□□ -0.55
MSL3-207ENST00000398527 TM4SF4P48230 202 aa11.63□□□□□ -0.55
MSL3-207ENST00000398527 FKBP1BP68106 108 aa11.63□□□□□ -0.55
MSL3-207ENST00000398527 CBLBQ13191 982 aa11.63□□□□□ -0.55
MSL3-207ENST00000398527 NR5A1Q13285 461 aa11.63□□□□□ -0.55
MSL3-207ENST00000398527 ANKRD39Q53RE8 183 aa11.63□□□□□ -0.55
MSL3-207ENST00000398527 ARL6IP4Q66PJ3 421 aaKnown RBP11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms