RNA–Protein interactions for RNA: ENST00000397021.5

MCF2L-206, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-206ENST00000397021 STAG3L1P0CL83 205 aa10.76□□□□□ -0.69
MCF2L-206ENST00000397021 XRCC6P12956 609 aaKnown RBP eCLIP10.76□□□□□ -0.69
MCF2L-206ENST00000397021 SFPQP23246 707 aaKnown RBP eCLIP10.76□□□□□ -0.69
MCF2L-206ENST00000397021 GLRA2P23416 452 aa10.76□□□□□ -0.69
MCF2L-206ENST00000397021 ARL2P36404 184 aa10.76□□□□□ -0.69
MCF2L-206ENST00000397021 ERVK-21P61565 698 aa10.76□□□□□ -0.69
MCF2L-206ENST00000397021 CDC42EP1Q00587 391 aa10.76□□□□□ -0.69
MCF2L-206ENST00000397021 GRIN1Q05586 938 aa10.76□□□□□ -0.69
MCF2L-206ENST00000397021 LONRF3Q496Y0 759 aa10.76□□□□□ -0.69
MCF2L-206ENST00000397021 SLC24A5Q71RS6 500 aa10.76□□□□□ -0.69
MCF2L-206ENST00000397021 KCNK18Q7Z418 384 aa10.76□□□□□ -0.69
MCF2L-206ENST00000397021 EXOC8Q8IYI6 725 aa10.76□□□□□ -0.69
MCF2L-206ENST00000397021 ZNF689Q96CS4 500 aaPredicted RBP10.76□□□□□ -0.69
MCF2L-206ENST00000397021 RAB34Q9BZG1 259 aa10.76□□□□□ -0.69
MCF2L-206ENST00000397021 BHMT2Q9H2M3 363 aa10.76□□□□□ -0.69
MCF2L-206ENST00000397021 RC3H2Q9HBD1 1191 aaKnown RBP10.76□□□□□ -0.69
MCF2L-206ENST00000397021 C1orf112Q9NSG2 853 aa10.76□□□□□ -0.69
MCF2L-206ENST00000397021 HCSTQ9UBK5 93 aa10.76□□□□□ -0.69
MCF2L-206ENST00000397021 DBR1Q9UK59 544 aaKnown RBP10.76□□□□□ -0.69
MCF2L-206ENST00000397021 PIN4Q9Y237 131 aaKnown RBP10.76□□□□□ -0.69
MCF2L-206ENST00000397021 SIP14410 1827 aa10.76□□□□□ -0.69
MCF2L-206ENST00000397021 ADGRA3Q8IWK6 1321 aa10.76□□□□□ -0.69
MCF2L-206ENST00000397021 TBKBP1A7MCY6 615 aa10.75□□□□□ -0.69
MCF2L-206ENST00000397021 LPXNO60711 386 aa10.75□□□□□ -0.69
MCF2L-206ENST00000397021 FAM189BP81408 668 aa10.75□□□□□ -0.69
MCF2L-206ENST00000397021 CAPSQ13938 189 aa10.75□□□□□ -0.69
MCF2L-206ENST00000397021 EPC2Q52LR7 807 aa10.75□□□□□ -0.69
MCF2L-206ENST00000397021 TWF2Q6IBS0 349 aaKnown RBP10.75□□□□□ -0.69
MCF2L-206ENST00000397021 TMEM192Q8IY95 271 aa10.75□□□□□ -0.69
MCF2L-206ENST00000397021 ZNF710Q8N1W2 664 aa10.75□□□□□ -0.69
MCF2L-206ENST00000397021 FBXO22Q8NEZ5 403 aa10.75□□□□□ -0.69
MCF2L-206ENST00000397021 BSNDQ8WZ55 320 aa10.75□□□□□ -0.69
MCF2L-206ENST00000397021 PNMA5Q96PV4 448 aa10.75□□□□□ -0.69
MCF2L-206ENST00000397021 INO80BQ9C086 356 aaPredicted RBP10.75□□□□□ -0.69
MCF2L-206ENST00000397021 PRDM6Q9NQX0 595 aa10.75□□□□□ -0.69
MCF2L-206ENST00000397021 MRPL42Q9Y6G3 142 aaKnown RBP10.75□□□□□ -0.69
MCF2L-206ENST00000397021 LRRIQ4A6NIV6 560 aa10.74□□□□□ -0.69
MCF2L-206ENST00000397021 INO80B-WBP1J3KQ70 363 aa10.74□□□□□ -0.69
MCF2L-206ENST00000397021 ASAP2O43150 1006 aa10.74□□□□□ -0.69
MCF2L-206ENST00000397021 GAS2O43903 313 aaKnown RBP10.74□□□□□ -0.69
MCF2L-206ENST00000397021 SSBP05455 408 aaKnown RBP eCLIP10.74□□□□□ -0.69
MCF2L-206ENST00000397021 LINC00271P0C7V0 271 aa10.74□□□□□ -0.69
MCF2L-206ENST00000397021 CYP11B2P19099 503 aa10.74□□□□□ -0.69
MCF2L-206ENST00000397021 MARCKSP29966 332 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-206ENST00000397021 CTNNB1P35222 781 aa10.74□□□□□ -0.69
MCF2L-206ENST00000397021 PHKA2P46019 1235 aa10.74□□□□□ -0.69
MCF2L-206ENST00000397021 PTENP60484 403 aa10.74□□□□□ -0.69
MCF2L-206ENST00000397021 TFDP1Q14186 410 aa10.74□□□□□ -0.69
MCF2L-206ENST00000397021 MXD4Q14582 209 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-206ENST00000397021 FOXD4L6Q3SYB3 417 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-206ENST00000397021 SPECC1Q5M775 1068 aa10.74□□□□□ -0.69
MCF2L-206ENST00000397021 FOXD4L3Q6VB84 417 aaPredicted RBP10.74□□□□□ -0.69
MCF2L-206ENST00000397021 SRGAP1Q7Z6B7 1085 aa10.74□□□□□ -0.69
MCF2L-206ENST00000397021 CABP7Q86V35 215 aa10.74□□□□□ -0.69
MCF2L-206ENST00000397021 ECHDC2Q86YB7 292 aa10.74□□□□□ -0.69
MCF2L-206ENST00000397021 LPPQ93052 612 aa10.74□□□□□ -0.69
MCF2L-206ENST00000397021 CPB2Q96IY4 423 aa10.74□□□□□ -0.69
MCF2L-206ENST00000397021 RNF19AQ9NV58 838 aa10.74□□□□□ -0.69
MCF2L-206ENST00000397021 TMEM161AQ9NX61 479 aa10.74□□□□□ -0.69
MCF2L-206ENST00000397021 DNM3Q9UQ16 869 aa10.74□□□□□ -0.69
MCF2L-206ENST00000397021 MTCH2Q9Y6C9 303 aa10.74□□□□□ -0.69
MCF2L-206ENST00000397021 PTPRSQ13332 1948 aa10.74□□□□□ -0.69
MCF2L-206ENST00000397021 LAMA2P24043 3122 aaKnown RBP10.73□□□□□ -0.69
MCF2L-206ENST00000397021 A0A0U1RQF3 1178 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 MEIS3P2A8K0S8 358 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 B4GALT5O43286 388 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 GTPBP6O43824 516 aaPredicted RBP10.73□□□□□ -0.69
MCF2L-206ENST00000397021 TSPAN1O60635 241 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 EYA4O95677 639 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 ATF7P17544 494 aaPredicted RBP10.73□□□□□ -0.69
MCF2L-206ENST00000397021 LIG1P18858 919 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 MUTP22033 750 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 BMPR1AP36894 532 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 MBTD1Q05BQ5 628 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 RAD51AP2Q09MP3 1159 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 GPM6BQ13491 265 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 PKP1Q13835 747 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 PTPAQ15257 358 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 SPOUT1Q5T280 376 aaKnown RBP10.73□□□□□ -0.69
MCF2L-206ENST00000397021 ARL6IP4Q66PJ3 421 aaKnown RBP10.73□□□□□ -0.69
MCF2L-206ENST00000397021 CDR2LQ86X02 465 aaPredicted RBP10.73□□□□□ -0.69
MCF2L-206ENST00000397021 CMTR2Q8IYT2 770 aaKnown RBP10.73□□□□□ -0.69
MCF2L-206ENST00000397021 SLC17A8Q8NDX2 589 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 MCPH1Q8NEM0 835 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 HELQQ8TDG4 1101 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 CLIC6Q96NY7 704 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 CASD1Q96PB1 797 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 USP28Q96RU2 1077 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 KIFC3Q9BVG8 833 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 RUSC1Q9BVN2 902 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 ELAC1Q9H777 363 aaKnown RBP10.73□□□□□ -0.69
MCF2L-206ENST00000397021 CHST12Q9NRB3 414 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 AGPAT5Q9NUQ2 364 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 DACT1Q9NYF0 836 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 TFIP11Q9UBB9 837 aaKnown RBP10.73□□□□□ -0.69
MCF2L-206ENST00000397021 USP20Q9Y2K6 914 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 STK24Q9Y6E0 443 aa10.73□□□□□ -0.69
MCF2L-206ENST00000397021 NPHP3-ACAD11A0A0J9YXS1 232 aa10.72□□□□□ -0.69
MCF2L-206ENST00000397021 ERLIN2O94905 339 aa10.72□□□□□ -0.69
MCF2L-206ENST00000397021 HOXA11P31270 313 aaPredicted RBP10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms