RNA–Protein interactions for RNA: ENST00000396389.5

TUBB-208, Transcript of tubulin beta class I, humanhuman

TSL 5 BASIC

Gene TUBB, Length 2,903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB-208ENST00000396389 NR1D1P20393 614 aa11.21□□□□□ -0.62
TUBB-208ENST00000396389 CYLC1P35663 651 aaPredicted RBP11.21□□□□□ -0.62
TUBB-208ENST00000396389 EPHB4P54760 987 aa11.21□□□□□ -0.62
TUBB-208ENST00000396389 MRPS9P82933 396 aaKnown RBP11.21□□□□□ -0.62
TUBB-208ENST00000396389 C8orf74Q6P047 294 aa11.21□□□□□ -0.62
TUBB-208ENST00000396389 PDXDC2PQ6P474 469 aa11.21□□□□□ -0.62
TUBB-208ENST00000396389 MAATS1Q7Z4T9 603 aa11.21□□□□□ -0.62
TUBB-208ENST00000396389 HPS3Q969F9 1004 aa11.21□□□□□ -0.62
TUBB-208ENST00000396389 TBC1D31Q96DN5 1066 aa11.21□□□□□ -0.62
TUBB-208ENST00000396389 RPGRIP1Q96KN7 1286 aa11.21□□□□□ -0.62
TUBB-208ENST00000396389 TRPM7Q96QT4 1865 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 PPP1R37O75864 691 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 RASSF9O75901 435 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 NR3C2P08235 984 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 CCNA1P78396 465 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 TRIM14Q14142 442 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 PGM5Q15124 567 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 NAIF1Q69YI7 327 aaPredicted RBP11.2□□□□□ -0.62
TUBB-208ENST00000396389 CD99L2Q8TCZ2 262 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 CCDC42Q96M95 316 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 PXMP2Q9NR77 195 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 PDGFCQ9NRA1 345 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 ESYT2A0FGR8 921 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 UNCXA6NJT0 531 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 hCG_1984214I3L0E3 225 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 CA12O43570 354 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 TM4SF4P48230 202 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 FAM110CQ1W6H9 321 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 PREPLQ4J6C6 727 aaPredicted RBP11.2□□□□□ -0.62
TUBB-208ENST00000396389 ZNF658Q5TYW1 1059 aaPredicted RBP11.2□□□□□ -0.62
TUBB-208ENST00000396389 PPP1R18Q6NYC8 613 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 C17orf99Q6UX52 265 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 ZNF713Q8N859 430 aaPredicted RBP11.2□□□□□ -0.62
TUBB-208ENST00000396389 PDCD2LQ9BRP1 358 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 BEGAINQ9BUH8 593 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 OSBPL7Q9BZF2 842 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 FAM207AQ9NSI2 230 aaPredicted RBP11.2□□□□□ -0.62
TUBB-208ENST00000396389 ZNHIT6Q9NWK9 470 aaKnown RBP11.2□□□□□ -0.62
TUBB-208ENST00000396389 GABRQQ9UN88 632 aa11.2□□□□□ -0.62
TUBB-208ENST00000396389 COL11A1P12107 1806 aaPredicted RBP11.19□□□□□ -0.62
TUBB-208ENST00000396389 ATP9AO75110 1047 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 ELNP15502 786 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 GCLCP48506 637 aaPredicted RBP11.19□□□□□ -0.62
TUBB-208ENST00000396389 HSD17B4P51659 736 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 CYP4A11Q02928 519 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 SPAG1Q07617 926 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 CALCRLQ16602 461 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 ACCSLQ4AC99 568 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 TSHZ1Q6ZSZ6 1077 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 IQCKQ8N0W5 287 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 FAXDC2Q96IV6 333 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 TUBGCP2Q9BSJ2 902 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 IFIH1Q9BYX4 1025 aaKnown RBP11.19□□□□□ -0.62
TUBB-208ENST00000396389 TPX2Q9ULW0 747 aaKnown RBP11.19□□□□□ -0.62
TUBB-208ENST00000396389 KIF1CO43896 1103 aaKnown RBP11.19□□□□□ -0.62
TUBB-208ENST00000396389 HEXIM1O94992 359 aaKnown RBP11.19□□□□□ -0.62
TUBB-208ENST00000396389 BCRP11274 1271 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 MDH1P40925 334 aaKnown RBP11.19□□□□□ -0.62
TUBB-208ENST00000396389 SMTNP53814 917 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 OAZ1P54368 228 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 INHBEP58166 350 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 DAGLBQ8NCG7 672 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 NPLOC4Q8TAT6 608 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 BMP2KQ9NSY1 1161 aaPredicted RBP11.19□□□□□ -0.62
TUBB-208ENST00000396389 ARHGAP20Q9P2F6 1191 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 PCDHA13Q9Y5I0 950 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 MYPNQ86TC9 1320 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 GOLGA6L7A0A1B0GV03 622 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 EPB41P11171 864 aaKnown RBP11.19□□□□□ -0.62
TUBB-208ENST00000396389 EIF4A3P38919 411 aaKnown RBP11.19□□□□□ -0.62
TUBB-208ENST00000396389 CDR1P51861 262 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 VAV2P52735 878 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 PRKCZQ05513 592 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 SPA17Q15506 151 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 ENOX2Q16206 610 aaKnown RBP11.19□□□□□ -0.62
TUBB-208ENST00000396389 ALS2CLQ60I27 953 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 GALNT17Q6IS24 598 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 CYB5D1Q6P9G0 228 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 PLEKHH3Q7Z736 793 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 DDX42Q86XP3 938 aaKnown RBP eCLIP11.19□□□□□ -0.62
TUBB-208ENST00000396389 KCTD17Q8N5Z5 321 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 CHST13Q8NET6 341 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 NSUN6Q8TEA1 469 aaKnown RBP11.19□□□□□ -0.62
TUBB-208ENST00000396389 COPS5Q92905 334 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 CYFIP2Q96F07 1278 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 KRT12Q99456 494 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 LRRC4CQ9HCJ2 640 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 KCNH7Q9NS40 1196 aa11.19□□□□□ -0.62
TUBB-208ENST00000396389 DOCK3Q8IZD9 2030 aa11.18□□□□□ -0.62
TUBB-208ENST00000396389 GTPBP6O43824 516 aaPredicted RBP11.18□□□□□ -0.62
TUBB-208ENST00000396389 TACC1O75410 805 aa11.18□□□□□ -0.62
TUBB-208ENST00000396389 FTCDO95954 541 aa11.18□□□□□ -0.62
TUBB-208ENST00000396389 SREBF1P36956 1147 aa11.18□□□□□ -0.62
TUBB-208ENST00000396389 CLNS1AP54105 237 aaKnown RBP11.18□□□□□ -0.62
TUBB-208ENST00000396389 PDE4DQ08499 809 aa11.18□□□□□ -0.62
TUBB-208ENST00000396389 TRIM32Q13049 653 aa11.18□□□□□ -0.62
TUBB-208ENST00000396389 MTMR1Q13613 665 aa11.18□□□□□ -0.62
TUBB-208ENST00000396389 MEA1Q16626 185 aa11.18□□□□□ -0.62
TUBB-208ENST00000396389 LY6KQ17RY6 165 aa11.18□□□□□ -0.62
TUBB-208ENST00000396389 KDM7AQ6ZMT4 941 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms