RNA–Protein interactions for RNA: ENST00000396355.5

NDE1-202, Transcript of nudE neurodevelopment protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDE1, Length 3,936 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-202ENST00000396355 TCP1P17987 556 aaKnown RBP9.05□□□□□ -0.96
NDE1-202ENST00000396355 ATP1A4Q13733 1029 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 FAAH2Q6GMR7 532 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 STYK1Q6J9G0 422 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 HEATR4Q86WZ0 1026 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 TRIM22Q8IYM9 498 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 IFNL3Q8IZI9 196 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 MAB21L3Q8N8X9 362 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 TEKT1Q969V4 418 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 OSBPL10Q9BXB5 764 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 ZBTB43O43298 467 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 MFAP3LO75121 409 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 SRGNP10124 158 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 PDE4BQ07343 736 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 SPAG1Q07617 926 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 MYBPC3Q14896 1274 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 C16orf72Q14CZ0 275 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 TTF1Q15361 905 aaPredicted RBP9.05□□□□□ -0.96
NDE1-202ENST00000396355 PUM3Q15397 648 aaKnown RBP9.05□□□□□ -0.96
NDE1-202ENST00000396355 RESP18Q5W5W9 173 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 WDR93Q6P2C0 686 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 KRT26Q7Z3Y9 468 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 ADGRA1Q86SQ6 560 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 ZNF34Q8IZ26 560 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 LCORLQ8N3X6 602 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 SPATA5Q8NB90 893 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 NUP85Q9BW27 656 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 UBXN6Q9BZV1 441 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 STMN4Q9H169 189 aaPredicted RBP9.05□□□□□ -0.96
NDE1-202ENST00000396355 SYNCQ9H7C4 482 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 ARHGEF10LQ9HCE6 1279 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 KCND1Q9NSA2 647 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 INTS13Q9NVM9 706 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 EURLQ9NYK6 297 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 STK24Q9Y6E0 443 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 PDE4DIPQ5VU43 2346 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 FAM237AA0A1B0GTK4 181 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.05□□□□□ -0.96
NDE1-202ENST00000396355 LRRC10BA6NIK2 292 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 KRIT1O00522 736 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 CYTH3O43739 400 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 FXR1P51114 621 aaKnown RBP eCLIP9.05□□□□□ -0.96
NDE1-202ENST00000396355 INAQ16352 499 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 DACT3Q96B18 629 aaPredicted RBP9.05□□□□□ -0.96
NDE1-202ENST00000396355 NACAP1Q9BZK3 213 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 ETNK2Q9NVF9 386 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 RMND1Q9NWS8 449 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 SUGT1Q9Y2Z0 365 aa9.05□□□□□ -0.96
NDE1-202ENST00000396355 SEC23IPQ9Y6Y8 1000 aaKnown RBP9.05□□□□□ -0.96
NDE1-202ENST00000396355 PPP6R2O75170 966 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 TARSP26639 723 aaKnown RBP9.04□□□□□ -0.96
NDE1-202ENST00000396355 HUNKP57058 714 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 IKQ13123 557 aaPredicted RBP9.04□□□□□ -0.96
NDE1-202ENST00000396355 DGKZQ13574 1117 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 TMEM67Q5HYA8 995 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 SUSD4Q5VX71 490 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 RIBC1Q8N443 379 aaPredicted RBP9.04□□□□□ -0.96
NDE1-202ENST00000396355 TRIML2Q8N7C3 387 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 LPIN2Q92539 896 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 IQCDQ96DY2 449 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 CATSPER2Q96P56 530 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 TXLNGQ9NUQ3 528 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 EXOC1Q9NV70 894 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 FBXL5Q9UKA1 691 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 JAG2Q9Y219 1238 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 DUSP10Q9Y6W6 482 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 COL1A1P02452 1464 aaPredicted RBP9.04□□□□□ -0.96
NDE1-202ENST00000396355 GOLGA8AA7E2F4 631 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 BTBD18B2RXH4 712 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 ACTN4O43707 911 aaKnown RBP9.04□□□□□ -0.96
NDE1-202ENST00000396355 APOEP02649 317 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 KCNJ6P48051 423 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 KRT31Q15323 416 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 GLE1Q53GS7 698 aaKnown RBP9.04□□□□□ -0.96
NDE1-202ENST00000396355 CC2D2BQ6DHV5 1058 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 KDM7AQ6ZMT4 941 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 SCUBE1Q8IWY4 988 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 SERBP1Q8NC51 408 aaKnown RBP eCLIP9.04□□□□□ -0.96
NDE1-202ENST00000396355 TMEM87BQ96K49 555 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 XPO6Q96QU8 1125 aaKnown RBP9.04□□□□□ -0.96
NDE1-202ENST00000396355 ADAM33Q9BZ11 813 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 RAB17Q9H0T7 212 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 TBC1D7Q9P0N9 293 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 KCNJ14Q9UNX9 436 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 LAMB2P55268 1798 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 CACNA1SQ13698 1873 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 BOLA2-SMG1P6H3BVE0 249 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 CAPN9O14815 690 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 TSPAN9O75954 239 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 SCG2P13521 617 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 AARSP49588 968 aaKnown RBP eCLIP9.04□□□□□ -0.96
NDE1-202ENST00000396355 BCAMP50895 628 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 MAP3K7CLP57077 242 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 MTMR3Q13615 1198 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 USP33Q8TEY7 942 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 U2AF1L4Q8WU68 220 aaKnown RBP9.04□□□□□ -0.96
NDE1-202ENST00000396355 UCMAQ8WVF2 138 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 DCPSQ96C86 337 aaKnown RBP9.04□□□□□ -0.96
NDE1-202ENST00000396355 TMEM237Q96Q45 408 aa9.04□□□□□ -0.96
NDE1-202ENST00000396355 SYT15Q9BQS2 421 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms