RNA–Protein interactions for RNA: ENST00000395969.6

VPS41-203, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5 BASIC

Gene VPS41, Length 3,181 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-203ENST00000395969 OLIG1Q8TAK6 271 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 SNX29Q8TEQ0 813 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 BAP1Q92560 729 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 FAM81BQ96LP2 452 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 PCMTD1Q96MG8 357 aaPredicted RBP5.85□□□□□ -1.47
VPS41-203ENST00000395969 NUDT12Q9BQG2 462 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 PDCD2LQ9BRP1 358 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 VEZTQ9HBM0 779 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 SAMSN1Q9NSI8 373 aaKnown RBP5.85□□□□□ -1.47
VPS41-203ENST00000395969 ABHD10Q9NUJ1 306 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 COL20A1Q9P218 1284 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 COQ4Q9Y3A0 265 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 CAPN7Q9Y6W3 813 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 EMSYQ7Z589 1322 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 COL1A2P08123 1366 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 GOLGA6CA6NDK9 693 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 SPDYE16A6NNV3 312 aaPredicted RBP5.85□□□□□ -1.47
VPS41-203ENST00000395969 MEFVO15553 781 aaPredicted RBP5.85□□□□□ -1.47
VPS41-203ENST00000395969 PPFIA3O75145 1194 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 GDF11O95390 407 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 GOLGA6DP0CG33 693 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 EPB41P11171 864 aaKnown RBP5.85□□□□□ -1.47
VPS41-203ENST00000395969 PAX7P23759 505 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 ARHGAP25P42331 645 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 PMS1P54277 932 aaKnown RBP5.85□□□□□ -1.47
VPS41-203ENST00000395969 INHBEP58166 350 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 TCP10Q12799 353 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 TARBP2Q15633 366 aaKnown RBP5.85□□□□□ -1.47
VPS41-203ENST00000395969 UBE2SQ16763 222 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 KNOP1Q1ED39 458 aaKnown RBP5.85□□□□□ -1.47
VPS41-203ENST00000395969 MAMDC4Q6UXC1 1216 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 B4GALNT4Q76KP1 1039 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 ERO1BQ86YB8 467 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 CCDC155Q8N6L0 562 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 MAGEC3Q8TD91 643 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 TEX13BQ9BXU2 312 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 CD248Q9HCU0 757 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 GOLGA6AQ9NYA3 693 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 CYP39A1Q9NYL5 469 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 AGTPBP1Q9UPW5 1226 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 DNM3Q9UQ16 869 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 SH3BP1Q9Y3L3 701 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 A0A0A6YYK5 440 aaPredicted RBP5.85□□□□□ -1.47
VPS41-203ENST00000395969 IGKV6-21A0A0C4DH24 114 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 KLHL33A6NCF5 533 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 H0YHG0 523 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 CCND2P30279 289 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 SLC16A2P36021 539 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 SLC26A2P50443 739 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 SMTNP53814 917 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 CACNB3P54284 484 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 GPAT2Q6NUI2 795 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 CYP26C1Q6V0L0 522 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 STXBP4Q6ZWJ1 553 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 ZNF720Q7Z2F6 126 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 CLEC10AQ8IUN9 316 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 HHIPL1Q96JK4 782 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 GDAP1L1Q96MZ0 367 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 TSPAN18Q96SJ8 248 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 BMP2KQ9NSY1 1161 aaPredicted RBP5.85□□□□□ -1.47
VPS41-203ENST00000395969 PANK4Q9NVE7 773 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 CEP72Q9P209 647 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 GGA2Q9UJY4 613 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 BZW2Q9Y6E2 419 aaKnown RBP5.85□□□□□ -1.47
VPS41-203ENST00000395969 ASTN1O14525 1302 aa5.85□□□□□ -1.47
VPS41-203ENST00000395969 MYH9P35579 1960 aaKnown RBP5.84□□□□□ -1.47
VPS41-203ENST00000395969 ANO9A1A5B4 782 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 ANKRD33BA6NCL7 494 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 PP2D1A8MPX8 630 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 GOLGA8KD6RF30 607 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 ABL1P00519 1130 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 CALRP27797 417 aaKnown RBP5.84□□□□□ -1.47
VPS41-203ENST00000395969 RBM5P52756 815 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS41-203ENST00000395969 IRX1P78414 480 aaPredicted RBP5.84□□□□□ -1.47
VPS41-203ENST00000395969 SARNPP82979 210 aaKnown RBP5.84□□□□□ -1.47
VPS41-203ENST00000395969 FAM26FQ5R3K3 315 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 EMC10Q5UCC4 262 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 NCAPH2Q6IBW4 605 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 WDR59Q6PJI9 974 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 USP17L6PQ6QN14 398 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 ABHD15Q6UXT9 468 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 ANKRD23Q86SG2 305 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 PNMA8AQ86V59 439 aaPredicted RBP5.84□□□□□ -1.47
VPS41-203ENST00000395969 GRAMD1CQ8IYS0 662 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 EIF1ADQ8N9N8 165 aaKnown RBP5.84□□□□□ -1.47
VPS41-203ENST00000395969 N4BP2L2Q92802 583 aaPredicted RBP5.84□□□□□ -1.47
VPS41-203ENST00000395969 RPGRIP1Q96KN7 1286 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 FGD4Q96M96 766 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 SELENOOQ9BVL4 669 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 CFHR5Q9BXR6 569 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 GANQ9H2C0 597 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 UNC45AQ9H3U1 944 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 RPAP3Q9H6T3 665 aaPredicted RBP5.84□□□□□ -1.47
VPS41-203ENST00000395969 TMEM134Q9H6X4 195 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 TMEM206Q9H813 350 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 CTNND2Q9UQB3 1225 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 EML1O00423 815 aa5.84□□□□□ -1.47
VPS41-203ENST00000395969 CALUO43852 315 aaPredicted RBP5.84□□□□□ -1.47
VPS41-203ENST00000395969 ZC3H11AO75152 810 aaKnown RBP eCLIP5.84□□□□□ -1.47
VPS41-203ENST00000395969 EGFRP00533 1210 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms