RNA–Protein interactions for RNA: ENST00000394872.6

COL4A6-203, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5 BASIC

Gene COL4A6, Length 6,750 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-203ENST00000394872 CXorf38Q8TB03 319 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 ZBTB18Q99592 522 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 SAYSD1Q9NPB0 183 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 LCMT1Q9UIC8 334 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 TNS3Q68CZ2 1445 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 CHRNA5P30532 468 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 PSMC5P62195 406 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 MXD4Q14582 209 aaPredicted RBP11.1□□□□□ -0.63
COL4A6-203ENST00000394872 QRICH1Q2TAL8 776 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 LXNQ9BS40 222 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 HEMGNQ9BXL5 484 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 SP110Q9HB58 689 aa11.1□□□□□ -0.63
COL4A6-203ENST00000394872 DIS3Q9Y2L1 958 aaKnown RBP11.1□□□□□ -0.63
COL4A6-203ENST00000394872 POTEFA5A3E0 1075 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 IPO5O00410 1097 aaKnown RBP11.09□□□□□ -0.63
COL4A6-203ENST00000394872 ACSL3O95573 720 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 HSPA4LO95757 839 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 POTEIP0CG38 1075 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 POTEGQ6S5H5 508 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 POTEEQ6S8J3 1075 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 ACAP3Q96P50 834 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 MXD3Q9BW11 206 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 GJB4Q9NTQ9 266 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 PREX2Q70Z35 1606 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 TRIM49BA6NDI0 452 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 NOP14P78316 857 aaKnown RBP11.09□□□□□ -0.63
COL4A6-203ENST00000394872 GPC5P78333 572 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 FAM133BQ5BKY9 247 aaKnown RBP11.09□□□□□ -0.63
COL4A6-203ENST00000394872 ZBTB41Q5SVQ8 909 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 YAF2Q8IY57 180 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 PROM2Q8N271 834 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 WHAMMQ8TF30 809 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 CCDC138Q96M89 665 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 DRC3Q9H069 523 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 LY9Q9HBG7 655 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 F5H423 210 aaPredicted RBP11.09□□□□□ -0.63
COL4A6-203ENST00000394872 MAP3K7O43318 606 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 APOEP02649 317 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 DCAF4L1Q3SXM0 396 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 KIF12Q96FN5 646 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 RMDN2Q96LZ7 410 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 TUBB6Q9BUF5 446 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 SARS2Q9NP81 518 aaKnown RBP11.09□□□□□ -0.63
COL4A6-203ENST00000394872 STAP1Q9ULZ2 295 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 NOVA2Q9UNW9 492 aaKnown RBP11.09□□□□□ -0.63
COL4A6-203ENST00000394872 AXIN2Q9Y2T1 843 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 GNA15P30679 374 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 SH3BGRP55822 239 aaPredicted RBP11.09□□□□□ -0.63
COL4A6-203ENST00000394872 FBXW4P57775 412 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 TFDP2Q14188 446 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 TMEM106CQ9BVX2 250 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 MAP3K20Q9NYL2 800 aaKnown RBP11.09□□□□□ -0.63
COL4A6-203ENST00000394872 KCNQ2O43526 872 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 PALMO75781 387 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 MOCS2O96007 188 aaPredicted RBP11.09□□□□□ -0.63
COL4A6-203ENST00000394872 HMGCS2P54868 508 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 ARL4CP56559 192 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 NNTQ13423 1086 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 KNOP1Q1ED39 458 aaKnown RBP11.09□□□□□ -0.63
COL4A6-203ENST00000394872 SIRT2Q8IXJ6 389 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 TTC13Q8NBP0 860 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 OXER1Q8TDS5 423 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 SAAL1Q96ER3 474 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 ITM2BQ9Y287 266 aa11.09□□□□□ -0.63
COL4A6-203ENST00000394872 A8MXQ7 604 aa11.08□□□□□ -0.63
COL4A6-203ENST00000394872 SDC4P31431 198 aa11.08□□□□□ -0.63
COL4A6-203ENST00000394872 MTMR2Q13614 643 aa11.08□□□□□ -0.63
COL4A6-203ENST00000394872 VEPH1Q14D04 833 aa11.08□□□□□ -0.63
COL4A6-203ENST00000394872 PDCD2Q16342 344 aaPredicted RBP11.08□□□□□ -0.63
COL4A6-203ENST00000394872 PPP4R4Q6NUP7 873 aa11.08□□□□□ -0.63
COL4A6-203ENST00000394872 BARHL2Q9NY43 387 aa11.08□□□□□ -0.63
COL4A6-203ENST00000394872 FAF1Q9UNN5 650 aaPredicted RBP11.08□□□□□ -0.63
COL4A6-203ENST00000394872 PI4K2BG5E9Z4 385 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 MFAP3LO75121 409 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 MAP2K2P36507 400 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 C11orf70Q9BRQ4 267 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 THEGQ9P2T0 379 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 HERC5Q9UII4 1024 aaKnown RBP11.08□□□□□ -0.64
COL4A6-203ENST00000394872 ZRANB2O95218 330 aaKnown RBP eCLIP11.08□□□□□ -0.64
COL4A6-203ENST00000394872 CA4P22748 312 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 HADHAP40939 763 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 AP1B1Q10567 949 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 TOB2Q14106 344 aaPredicted RBP11.08□□□□□ -0.64
COL4A6-203ENST00000394872 NFIXQ14938 502 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 KRT39Q6A163 491 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 GIPC2Q8TF65 315 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 ASIC4Q96FT7 647 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 EIF2AK1Q9BQI3 630 aaKnown RBP11.08□□□□□ -0.64
COL4A6-203ENST00000394872 TXLNGQ9NUQ3 528 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 SLC9A2Q9UBY0 812 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 E5RI56 91 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 FDX1P10109 184 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 CASP1P29466 404 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 PSMC1P62191 440 aaKnown RBP11.08□□□□□ -0.64
COL4A6-203ENST00000394872 IMPG1Q17R60 797 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 MICALL2Q8IY33 904 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 SCG3Q8WXD2 468 aaKnown RBP11.08□□□□□ -0.64
COL4A6-203ENST00000394872 SERPINI1Q99574 410 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 MAGEB5Q9BZ81 275 aa11.08□□□□□ -0.64
COL4A6-203ENST00000394872 TPX2Q9ULW0 747 aaKnown RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms