RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 EYA4O95677 639 aa20.47■□□□□ 0.87
PDLIM7-205ENST00000393551 GCFC2P16383 781 aaKnown RBP20.47■□□□□ 0.87
PDLIM7-205ENST00000393551 XBP1P17861 261 aa20.47■□□□□ 0.87
PDLIM7-205ENST00000393551 QARSP47897 775 aaKnown RBP20.47■□□□□ 0.87
PDLIM7-205ENST00000393551 ST3GAL1Q11201 340 aa20.47■□□□□ 0.87
PDLIM7-205ENST00000393551 SMAD4Q13485 552 aaKnown RBP20.47■□□□□ 0.87
PDLIM7-205ENST00000393551 ANKRD1Q15327 319 aa20.47■□□□□ 0.87
PDLIM7-205ENST00000393551 TMEM31Q5JXX7 168 aa20.47■□□□□ 0.87
PDLIM7-205ENST00000393551 RHPN2Q8IUC4 686 aa20.47■□□□□ 0.87
PDLIM7-205ENST00000393551 THNSL1Q8IYQ7 743 aa20.47■□□□□ 0.87
PDLIM7-205ENST00000393551 NSUN7Q8NE18 718 aaKnown RBP20.47■□□□□ 0.87
PDLIM7-205ENST00000393551 GCOM2Q9BZD3 368 aaPredicted RBP20.47■□□□□ 0.87
PDLIM7-205ENST00000393551 IFT122Q9HBG6 1241 aa20.47■□□□□ 0.87
PDLIM7-205ENST00000393551 CD207Q9UJ71 328 aa20.47■□□□□ 0.87
PDLIM7-205ENST00000393551 FAM50BQ9Y247 325 aa20.47■□□□□ 0.87
PDLIM7-205ENST00000393551 ARID2Q68CP9 1835 aa20.47■□□□□ 0.87
PDLIM7-205ENST00000393551 WDFY4Q6ZS81 3184 aa20.47■□□□□ 0.87
PDLIM7-205ENST00000393551 WNT7AO00755 349 aa20.46■□□□□ 0.87
PDLIM7-205ENST00000393551 ZBTB39O15060 712 aa20.46■□□□□ 0.87
PDLIM7-205ENST00000393551 TBX3O15119 743 aa20.46■□□□□ 0.87
PDLIM7-205ENST00000393551 LAG3P18627 525 aa20.46■□□□□ 0.87
PDLIM7-205ENST00000393551 NDUFV1P49821 464 aa20.46■□□□□ 0.87
PDLIM7-205ENST00000393551 PLCB3Q01970 1234 aa20.46■□□□□ 0.87
PDLIM7-205ENST00000393551 ERICH6BQ5W0A0 696 aa20.46■□□□□ 0.87
PDLIM7-205ENST00000393551 KCNT2Q6UVM3 1135 aa20.46■□□□□ 0.87
PDLIM7-205ENST00000393551 RNF169Q8NCN4 708 aa20.46■□□□□ 0.87
PDLIM7-205ENST00000393551 TLE6Q9H808 572 aa20.46■□□□□ 0.87
PDLIM7-205ENST00000393551 RGL1Q9NZL6 768 aa20.46■□□□□ 0.87
PDLIM7-205ENST00000393551 BARX2Q9UMQ3 279 aaPredicted RBP20.46■□□□□ 0.87
PDLIM7-205ENST00000393551 HOXA2O43364 376 aa20.45■□□□□ 0.86
PDLIM7-205ENST00000393551 JAK2O60674 1132 aa20.45■□□□□ 0.86
PDLIM7-205ENST00000393551 EOMESO95936 686 aa20.45■□□□□ 0.86
PDLIM7-205ENST00000393551 P4HBP07237 508 aaKnown RBP20.45■□□□□ 0.86
PDLIM7-205ENST00000393551 DNM2P50570 870 aa20.45■□□□□ 0.86
PDLIM7-205ENST00000393551 CDC42EP1Q00587 391 aa20.45■□□□□ 0.86
PDLIM7-205ENST00000393551 COASYQ13057 564 aa20.45■□□□□ 0.86
PDLIM7-205ENST00000393551 KCNC3Q14003 757 aa20.45■□□□□ 0.86
PDLIM7-205ENST00000393551 EPHA7Q15375 998 aa20.45■□□□□ 0.86
PDLIM7-205ENST00000393551 ZNF410Q86VK4 478 aa20.45■□□□□ 0.86
PDLIM7-205ENST00000393551 LRRC43Q8N309 656 aa20.45■□□□□ 0.86
PDLIM7-205ENST00000393551 SMRP1Q8NCR6 262 aa20.45■□□□□ 0.86
PDLIM7-205ENST00000393551 HELQQ8TDG4 1101 aa20.45■□□□□ 0.86
PDLIM7-205ENST00000393551 MICAL1Q8TDZ2 1067 aa20.45■□□□□ 0.86
PDLIM7-205ENST00000393551 MRPS27Q92552 414 aaKnown RBP20.45■□□□□ 0.86
PDLIM7-205ENST00000393551 PPP2R3CQ969Q6 453 aa20.45■□□□□ 0.86
PDLIM7-205ENST00000393551 LXNQ9BS40 222 aa20.45■□□□□ 0.86
PDLIM7-205ENST00000393551 TRAIPQ9BWF2 469 aa20.45■□□□□ 0.86
PDLIM7-205ENST00000393551 DHX33Q9H6R0 707 aaKnown RBP20.45■□□□□ 0.86
PDLIM7-205ENST00000393551 CHST12Q9NRB3 414 aa20.45■□□□□ 0.86
PDLIM7-205ENST00000393551 LZTS1Q9Y250 596 aa20.45■□□□□ 0.86
PDLIM7-205ENST00000393551 MEIS3P2A8K0S8 358 aa20.44■□□□□ 0.86
PDLIM7-205ENST00000393551 KRT2P35908 639 aa20.44■□□□□ 0.86
PDLIM7-205ENST00000393551 PHKA2P46019 1235 aa20.44■□□□□ 0.86
PDLIM7-205ENST00000393551 DUSP6Q16828 381 aa20.44■□□□□ 0.86
PDLIM7-205ENST00000393551 CSPP1Q1MSJ5 1256 aa20.44■□□□□ 0.86
PDLIM7-205ENST00000393551 C4orf19Q8IY42 314 aa20.44■□□□□ 0.86
PDLIM7-205ENST00000393551 LPPQ93052 612 aa20.44■□□□□ 0.86
PDLIM7-205ENST00000393551 DACT1Q9NYF0 836 aa20.44■□□□□ 0.86
PDLIM7-205ENST00000393551 HIDE1A8MVS5 230 aa20.43■□□□□ 0.86
PDLIM7-205ENST00000393551 NEK4P51957 841 aa20.43■□□□□ 0.86
PDLIM7-205ENST00000393551 CTTNQ14247 550 aaKnown RBP20.43■□□□□ 0.86
PDLIM7-205ENST00000393551 ABI1Q8IZP0 508 aa20.43■□□□□ 0.86
PDLIM7-205ENST00000393551 WASF1Q92558 559 aa20.43■□□□□ 0.86
PDLIM7-205ENST00000393551 TMEM143Q96AN5 459 aa20.43■□□□□ 0.86
PDLIM7-205ENST00000393551 DYDC2Q96IM9 177 aa20.43■□□□□ 0.86
PDLIM7-205ENST00000393551 CEP170P1Q96L14 293 aa20.43■□□□□ 0.86
PDLIM7-205ENST00000393551 NLRP4Q96MN2 994 aa20.43■□□□□ 0.86
PDLIM7-205ENST00000393551 ZNF558Q96NG5 402 aa20.43■□□□□ 0.86
PDLIM7-205ENST00000393551 MINDY3Q9H8M7 445 aa20.43■□□□□ 0.86
PDLIM7-205ENST00000393551 BTBD18B2RXH4 712 aa20.42■□□□□ 0.86
PDLIM7-205ENST00000393551 SLITRK3O94933 977 aa20.42■□□□□ 0.86
PDLIM7-205ENST00000393551 SFPQP23246 707 aaKnown RBP eCLIP20.42■□□□□ 0.86
PDLIM7-205ENST00000393551 YWHABP31946 246 aaKnown RBP20.42■□□□□ 0.86
PDLIM7-205ENST00000393551 CYP4A11Q02928 519 aa20.42■□□□□ 0.86
PDLIM7-205ENST00000393551 LONRF3Q496Y0 759 aa20.42■□□□□ 0.86
PDLIM7-205ENST00000393551 PLPP4Q5VZY2 271 aa20.42■□□□□ 0.86
PDLIM7-205ENST00000393551 NCAPH2Q6IBW4 605 aa20.42■□□□□ 0.86
PDLIM7-205ENST00000393551 SLC39A11Q8N1S5 342 aa20.42■□□□□ 0.86
PDLIM7-205ENST00000393551 PRPF31Q8WWY3 499 aaKnown RBP20.42■□□□□ 0.86
PDLIM7-205ENST00000393551 NAP1L4Q99733 375 aaKnown RBP20.42■□□□□ 0.86
PDLIM7-205ENST00000393551 TCF25Q9BQ70 676 aa20.42■□□□□ 0.86
PDLIM7-205ENST00000393551 BMP2KQ9NSY1 1161 aaPredicted RBP20.42■□□□□ 0.86
PDLIM7-205ENST00000393551 PIN4Q9Y237 131 aaKnown RBP20.42■□□□□ 0.86
PDLIM7-205ENST00000393551 COL4A3BPQ9Y5P4 624 aa20.42■□□□□ 0.86
PDLIM7-205ENST00000393551 DCXO43602 365 aa20.41■□□□□ 0.86
PDLIM7-205ENST00000393551 ALADP13716 330 aa20.41■□□□□ 0.86
PDLIM7-205ENST00000393551 TWF2Q6IBS0 349 aaKnown RBP20.41■□□□□ 0.86
PDLIM7-205ENST00000393551 PDE12Q6L8Q7 609 aaKnown RBP20.41■□□□□ 0.86
PDLIM7-205ENST00000393551 TMEM173Q86WV6 379 aaPredicted RBP20.41■□□□□ 0.86
PDLIM7-205ENST00000393551 SLFN12Q8IYM2 578 aa20.41■□□□□ 0.86
PDLIM7-205ENST00000393551 SLC7A3Q8WY07 619 aa20.41■□□□□ 0.86
PDLIM7-205ENST00000393551 FAM105AQ9NUU6 356 aa20.41■□□□□ 0.86
PDLIM7-205ENST00000393551 SPG21Q9NZD8 308 aa20.41■□□□□ 0.86
PDLIM7-205ENST00000393551 USP15Q9Y4E8 981 aaPredicted RBP20.41■□□□□ 0.86
PDLIM7-205ENST00000393551 NT5C1B-RDH14C9J2C7 533 aa20.4■□□□□ 0.86
PDLIM7-205ENST00000393551 DKC1O60832 514 aaKnown RBP eCLIP20.4■□□□□ 0.86
PDLIM7-205ENST00000393551 ZNF623O75123 536 aa20.4■□□□□ 0.86
PDLIM7-205ENST00000393551 HOXA11P31270 313 aaPredicted RBP20.4■□□□□ 0.86
PDLIM7-205ENST00000393551 FOSBP53539 338 aa20.4■□□□□ 0.86
PDLIM7-205ENST00000393551 POLGP54098 1239 aaPredicted RBP20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms