RNA–Protein interactions for RNA: ENST00000378156.8

NPHP4-201, Transcript of nephrocystin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP4, Length 4,994 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-201ENST00000378156 SLIT1O75093 1534 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 GPR75-ASB3A0A0A6YYF3 556 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 KLRK1P26718 216 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 COL9A3Q14050 684 aaPredicted RBP16.13■□□□□ 0.17
NPHP4-201ENST00000378156 SCARA5Q6ZMJ2 495 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 CTNND1O60716 968 aaKnown RBP16.13■□□□□ 0.17
NPHP4-201ENST00000378156 DR1Q01658 176 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 NFX1Q12986 1120 aaKnown RBP16.13■□□□□ 0.17
NPHP4-201ENST00000378156 NTRK3Q16288 839 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 ZNF667Q5HYK9 610 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 OR6B2Q6IFH4 312 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 RHOT2Q8IXI1 618 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 MICALL2Q8IY33 904 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 CFAP61Q8NHU2 1237 aa16.13■□□□□ 0.17
NPHP4-201ENST00000378156 COG7P83436 770 aa16.12■□□□□ 0.17
NPHP4-201ENST00000378156 ITKQ08881 620 aa16.12■□□□□ 0.17
NPHP4-201ENST00000378156 EPHA7Q15375 998 aa16.12■□□□□ 0.17
NPHP4-201ENST00000378156 TSPYL2Q9H2G4 693 aaPredicted RBP16.12■□□□□ 0.17
NPHP4-201ENST00000378156 ZNF302Q9NR11 478 aa16.12■□□□□ 0.17
NPHP4-201ENST00000378156 GLE1Q53GS7 698 aaKnown RBP16.12■□□□□ 0.17
NPHP4-201ENST00000378156 ILDR1Q86SU0 546 aaPredicted RBP16.12■□□□□ 0.17
NPHP4-201ENST00000378156 PLAAQ9Y263 795 aa16.12■□□□□ 0.17
NPHP4-201ENST00000378156 STXBP3O00186 592 aa16.12■□□□□ 0.17
NPHP4-201ENST00000378156 SMIM24O75264 130 aa16.12■□□□□ 0.17
NPHP4-201ENST00000378156 ECEL1O95672 775 aa16.12■□□□□ 0.17
NPHP4-201ENST00000378156 CD44P16070 742 aaKnown RBP16.12■□□□□ 0.17
NPHP4-201ENST00000378156 HEXIM2Q96MH2 286 aaKnown RBP16.12■□□□□ 0.17
NPHP4-201ENST00000378156 CALN1Q9BXU9 219 aa16.12■□□□□ 0.17
NPHP4-201ENST00000378156 FRMD4AQ9P2Q2 1039 aaPredicted RBP16.12■□□□□ 0.17
NPHP4-201ENST00000378156 PPP1R9AQ9ULJ8 1098 aa16.12■□□□□ 0.17
NPHP4-201ENST00000378156 FAF1Q9UNN5 650 aaPredicted RBP16.12■□□□□ 0.17
NPHP4-201ENST00000378156 KRT1P04264 644 aa16.12■□□□□ 0.17
NPHP4-201ENST00000378156 NCAPHQ15003 741 aa16.12■□□□□ 0.17
NPHP4-201ENST00000378156 PDXDC1Q6P996 788 aa16.12■□□□□ 0.17
NPHP4-201ENST00000378156 SPATA4Q8NEY3 305 aa16.12■□□□□ 0.17
NPHP4-201ENST00000378156 PDHBP11177 359 aa16.11■□□□□ 0.17
NPHP4-201ENST00000378156 YWHAGP61981 247 aaKnown RBP eCLIP16.11■□□□□ 0.17
NPHP4-201ENST00000378156 FAM151AQ8WW52 585 aa16.11■□□□□ 0.17
NPHP4-201ENST00000378156 LPAR1Q92633 364 aa16.11■□□□□ 0.17
NPHP4-201ENST00000378156 PCDHA10Q9Y5I2 948 aa16.11■□□□□ 0.17
NPHP4-201ENST00000378156 ARHGEF37A1IGU5 675 aa16.11■□□□□ 0.17
NPHP4-201ENST00000378156 MGEA5O60502 916 aa16.11■□□□□ 0.17
NPHP4-201ENST00000378156 OATP04181 439 aa16.11■□□□□ 0.17
NPHP4-201ENST00000378156 RSBN1LQ6PCB5 846 aaPredicted RBP16.11■□□□□ 0.17
NPHP4-201ENST00000378156 SLC38A10Q9HBR0 1119 aa16.11■□□□□ 0.17
NPHP4-201ENST00000378156 ZNF70Q9UC06 446 aaPredicted RBP16.11■□□□□ 0.17
NPHP4-201ENST00000378156 NPHP3-ACAD11A0A0J9YXS1 232 aa16.11■□□□□ 0.17
NPHP4-201ENST00000378156 MYMKA6NI61 221 aa16.11■□□□□ 0.17
NPHP4-201ENST00000378156 POC1B-GALNT4F8VUJ3 575 aa16.11■□□□□ 0.17
NPHP4-201ENST00000378156 SH3BP5O60239 455 aa16.11■□□□□ 0.17
NPHP4-201ENST00000378156 BAG2O95816 211 aa16.11■□□□□ 0.17
NPHP4-201ENST00000378156 PPP4CP60510 307 aa16.11■□□□□ 0.17
NPHP4-201ENST00000378156 ZBTB17Q13105 803 aa16.11■□□□□ 0.17
NPHP4-201ENST00000378156 TTLL4Q14679 1199 aa16.11■□□□□ 0.17
NPHP4-201ENST00000378156 COG2Q14746 738 aa16.11■□□□□ 0.17
NPHP4-201ENST00000378156 TRIP13Q15645 432 aaPredicted RBP16.11■□□□□ 0.17
NPHP4-201ENST00000378156 CYP4F22Q6NT55 531 aa16.11■□□□□ 0.17
NPHP4-201ENST00000378156 HVCN1Q96D96 273 aa16.11■□□□□ 0.17
NPHP4-201ENST00000378156 FAM213AQ9BRX8 229 aa16.11■□□□□ 0.17
NPHP4-201ENST00000378156 TFR2Q9UP52 801 aa16.11■□□□□ 0.17
NPHP4-201ENST00000378156 HMGB1P1B2RPK0 211 aaPredicted RBP16.1■□□□□ 0.17
NPHP4-201ENST00000378156 IL9RQ01113 521 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 CUL1Q13616 776 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 LRRC8CQ8TDW0 803 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 C7orf25Q9BPX7 421 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 L2HGDHQ9H9P8 463 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 CCDC188H7C350 402 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 MYO1CO00159 1063 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 SLC10A5Q5PT55 438 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 ARMCX2Q7L311 632 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 ERICH1Q86X53 443 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 ELOA2Q8IYF1 753 aaPredicted RBP16.1■□□□□ 0.17
NPHP4-201ENST00000378156 COG1Q8WTW3 980 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 EYA4O95677 639 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 PHKA2P46019 1235 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 KLK7P49862 253 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 MTMR2Q13614 643 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 ZKSCAN8Q15776 578 aaPredicted RBP16.1■□□□□ 0.17
NPHP4-201ENST00000378156 DBN1Q16643 649 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 MTRQ99707 1265 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 DDX47Q9H0S4 455 aaKnown RBP16.1■□□□□ 0.17
NPHP4-201ENST00000378156 LRFN2Q9ULH4 789 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 SNX12Q9UMY4 172 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 MCF2LO15068 1137 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 WDR46O15213 610 aaKnown RBP16.1■□□□□ 0.17
NPHP4-201ENST00000378156 FGFR2P21802 821 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 ARL4AP40617 200 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 STYK1Q6J9G0 422 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 LRRC1Q9BTT6 524 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 CNOT10Q9H9A5 744 aaKnown RBP16.1■□□□□ 0.17
NPHP4-201ENST00000378156 RGL1Q9NZL6 768 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 TPX2Q9ULW0 747 aaKnown RBP16.1■□□□□ 0.17
NPHP4-201ENST00000378156 SNX24Q9Y343 169 aa16.1■□□□□ 0.17
NPHP4-201ENST00000378156 DCCP43146 1447 aa16.09■□□□□ 0.17
NPHP4-201ENST00000378156 ZNF394Q53GI3 561 aa16.09■□□□□ 0.17
NPHP4-201ENST00000378156 CDKL2Q92772 493 aa16.09■□□□□ 0.17
NPHP4-201ENST00000378156 PDS5AQ29RF7 1337 aaKnown RBP16.09■□□□□ 0.17
NPHP4-201ENST00000378156 SPON1Q9HCB6 807 aa16.09■□□□□ 0.17
NPHP4-201ENST00000378156 VAMP7P51809 220 aa16.09■□□□□ 0.17
NPHP4-201ENST00000378156 DYNLT1P63172 113 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms