RNA–Protein interactions for RNA: ENST00000366731.9

MRPL55-205, Transcript of mitochondrial ribosomal protein L55, humanhuman

TSL 2 BASIC

Gene MRPL55, Length 1,423 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-205ENST00000366731 PTPROQ16827 1216 aa15.23■□□□□ 0.03
MRPL55-205ENST00000366731 TWF2Q6IBS0 349 aaKnown RBP15.23■□□□□ 0.03
MRPL55-205ENST00000366731 FERMT3Q86UX7 667 aa15.23■□□□□ 0.03
MRPL55-205ENST00000366731 CLP1Q92989 425 aaKnown RBP15.23■□□□□ 0.03
MRPL55-205ENST00000366731 MRPL38Q96DV4 380 aaKnown RBP15.23■□□□□ 0.03
MRPL55-205ENST00000366731 POLR3CQ9BUI4 534 aaPredicted RBP15.23■□□□□ 0.03
MRPL55-205ENST00000366731 MINDY3Q9H8M7 445 aa15.23■□□□□ 0.03
MRPL55-205ENST00000366731 RNF216Q9NWF9 866 aaPredicted RBP15.23■□□□□ 0.03
MRPL55-205ENST00000366731 LMCD1Q9NZU5 365 aa15.23■□□□□ 0.03
MRPL55-205ENST00000366731 LRWD1Q9UFC0 647 aa15.23■□□□□ 0.03
MRPL55-205ENST00000366731 TTC3P53804 2025 aa15.23■□□□□ 0.03
MRPL55-205ENST00000366731 PRRC2BQ5JSZ5 2229 aaKnown RBP15.22■□□□□ 0.03
MRPL55-205ENST00000366731 DGAT1O75907 488 aa15.22■□□□□ 0.03
MRPL55-205ENST00000366731 RB1P06400 928 aa15.22■□□□□ 0.03
MRPL55-205ENST00000366731 ECM1Q16610 540 aa15.22■□□□□ 0.03
MRPL55-205ENST00000366731 ABI1Q8IZP0 508 aa15.22■□□□□ 0.03
MRPL55-205ENST00000366731 ASAP3Q8TDY4 903 aa15.22■□□□□ 0.03
MRPL55-205ENST00000366731 NACC1Q96RE7 527 aa15.22■□□□□ 0.03
MRPL55-205ENST00000366731 C11orf84Q9BUA3 381 aaPredicted RBP15.22■□□□□ 0.03
MRPL55-205ENST00000366731 ELAC1Q9H777 363 aaKnown RBP15.22■□□□□ 0.03
MRPL55-205ENST00000366731 GPRC5CQ9NQ84 441 aa15.22■□□□□ 0.03
MRPL55-205ENST00000366731 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.22■□□□□ 0.03
MRPL55-205ENST00000366731 TYW1Q9NV66 732 aaKnown RBP15.22■□□□□ 0.03
MRPL55-205ENST00000366731 DACT1Q9NYF0 836 aa15.22■□□□□ 0.03
MRPL55-205ENST00000366731 RWDD3Q9Y3V2 267 aa15.22■□□□□ 0.03
MRPL55-205ENST00000366731 WDR81Q562E7 1941 aa15.22■□□□□ 0.03
MRPL55-205ENST00000366731 LOXHD1Q8IVV2 1947 aa15.22■□□□□ 0.03
MRPL55-205ENST00000366731 CHD7Q9P2D1 2997 aa15.22■□□□□ 0.03
MRPL55-205ENST00000366731 A0A0U1RQF3 1178 aa15.21■□□□□ 0.03
MRPL55-205ENST00000366731 PP2D1A8MPX8 630 aa15.21■□□□□ 0.03
MRPL55-205ENST00000366731 ASAP2O43150 1006 aa15.21■□□□□ 0.03
MRPL55-205ENST00000366731 GAS2O43903 313 aaKnown RBP15.21■□□□□ 0.03
MRPL55-205ENST00000366731 XRCC6P12956 609 aaKnown RBP eCLIP15.21■□□□□ 0.03
MRPL55-205ENST00000366731 RPA1P27694 616 aa15.21■□□□□ 0.03
MRPL55-205ENST00000366731 CDC25AP30304 524 aa15.21■□□□□ 0.03
MRPL55-205ENST00000366731 FXR2P51116 673 aaKnown RBP eCLIP15.21■□□□□ 0.03
MRPL55-205ENST00000366731 MRPS5P82675 430 aaKnown RBP15.21■□□□□ 0.03
MRPL55-205ENST00000366731 IL17AQ16552 155 aa15.21■□□□□ 0.03
MRPL55-205ENST00000366731 EP400NLQ6ZTU2 488 aa15.21■□□□□ 0.03
MRPL55-205ENST00000366731 KLHL23Q8NBE8 558 aa15.21■□□□□ 0.03
MRPL55-205ENST00000366731 LPPQ93052 612 aa15.21■□□□□ 0.03
MRPL55-205ENST00000366731 COL25A1Q9BXS0 654 aaPredicted RBP15.21■□□□□ 0.03
MRPL55-205ENST00000366731 POLR3FQ9H1D9 316 aaPredicted RBP15.21■□□□□ 0.03
MRPL55-205ENST00000366731 POLD4Q9HCU8 107 aa15.21■□□□□ 0.03
MRPL55-205ENST00000366731 CHST12Q9NRB3 414 aa15.21■□□□□ 0.03
MRPL55-205ENST00000366731 RNF19AQ9NV58 838 aa15.21■□□□□ 0.03
MRPL55-205ENST00000366731 PLAGL2Q9UPG8 496 aa15.21■□□□□ 0.03
MRPL55-205ENST00000366731 VPS37CA5D8V6 355 aaPredicted RBP15.2■□□□□ 0.02
MRPL55-205ENST00000366731 ARHGEF35A5YM69 484 aa15.2■□□□□ 0.02
MRPL55-205ENST00000366731 C5orf67F2Z3F1 127 aa15.2■□□□□ 0.02
MRPL55-205ENST00000366731 ITGB1P05556 798 aa15.2■□□□□ 0.02
MRPL55-205ENST00000366731 PHKA2P46019 1235 aa15.2■□□□□ 0.02
MRPL55-205ENST00000366731 CUL4AQ13619 759 aa15.2■□□□□ 0.02
MRPL55-205ENST00000366731 MXD4Q14582 209 aaPredicted RBP15.2■□□□□ 0.02
MRPL55-205ENST00000366731 ZRSR1Q15695 479 aaKnown RBP15.2■□□□□ 0.02
MRPL55-205ENST00000366731 RILPL1Q5EBL4 403 aa15.2■□□□□ 0.02
MRPL55-205ENST00000366731 DTHD1Q6ZMT9 781 aa15.2■□□□□ 0.02
MRPL55-205ENST00000366731 FAM43BQ6ZT52 329 aaPredicted RBP15.2■□□□□ 0.02
MRPL55-205ENST00000366731 SRGAP1Q7Z6B7 1085 aa15.2■□□□□ 0.02
MRPL55-205ENST00000366731 HELQQ8TDG4 1101 aa15.2■□□□□ 0.02
MRPL55-205ENST00000366731 SNX29Q8TEQ0 813 aa15.2■□□□□ 0.02
MRPL55-205ENST00000366731 ATXN2LQ8WWM7 1075 aaKnown RBP15.2■□□□□ 0.02
MRPL55-205ENST00000366731 HLA-CQ95604 372 aa15.2■□□□□ 0.02
MRPL55-205ENST00000366731 CASD1Q96PB1 797 aa15.2■□□□□ 0.02
MRPL55-205ENST00000366731 ASB2Q96Q27 587 aa15.2■□□□□ 0.02
MRPL55-205ENST00000366731 TMEM117Q9H0C3 514 aa15.2■□□□□ 0.02
MRPL55-205ENST00000366731 KIAA1024Q9UPX6 916 aa15.2■□□□□ 0.02
MRPL55-205ENST00000366731 INO80B-WBP1J3KQ70 363 aa15.19■□□□□ 0.02
MRPL55-205ENST00000366731 ATF7P17544 494 aaPredicted RBP15.19■□□□□ 0.02
MRPL55-205ENST00000366731 GLRA2P23416 452 aa15.19■□□□□ 0.02
MRPL55-205ENST00000366731 ARL2P36404 184 aa15.19■□□□□ 0.02
MRPL55-205ENST00000366731 CAPSQ13938 189 aa15.19■□□□□ 0.02
MRPL55-205ENST00000366731 TFDP1Q14186 410 aa15.19■□□□□ 0.02
MRPL55-205ENST00000366731 PDIA5Q14554 519 aa15.19■□□□□ 0.02
MRPL55-205ENST00000366731 TCEAL5Q5H9L2 206 aa15.19■□□□□ 0.02
MRPL55-205ENST00000366731 CLLU1OSQ5K130 101 aa15.19■□□□□ 0.02
MRPL55-205ENST00000366731 HAUS3Q68CZ6 603 aa15.19■□□□□ 0.02
MRPL55-205ENST00000366731 PADI6Q6TGC4 694 aa15.19■□□□□ 0.02
MRPL55-205ENST00000366731 LRRC55Q6ZSA7 311 aa15.19■□□□□ 0.02
MRPL55-205ENST00000366731 PLVAPQ9BX97 442 aa15.19■□□□□ 0.02
MRPL55-205ENST00000366731 RAB34Q9BZG1 259 aa15.19■□□□□ 0.02
MRPL55-205ENST00000366731 DDX19AQ9NUU7 478 aaKnown RBP15.19■□□□□ 0.02
MRPL55-205ENST00000366731 DBR1Q9UK59 544 aaKnown RBP15.19■□□□□ 0.02
MRPL55-205ENST00000366731 PCDHB12Q9Y5F1 795 aa15.19■□□□□ 0.02
MRPL55-205ENST00000366731 COL4A6Q14031 1691 aa15.19■□□□□ 0.02
MRPL55-205ENST00000366731 EYSQ5T1H1 3165 aa15.18■□□□□ 0.02
MRPL55-205ENST00000366731 LRRIQ4A6NIV6 560 aa15.18■□□□□ 0.02
MRPL55-205ENST00000366731 MEIS3P2A8K0S8 358 aa15.18■□□□□ 0.02
MRPL55-205ENST00000366731 HOXA2O43364 376 aa15.18■□□□□ 0.02
MRPL55-205ENST00000366731 ERLIN2O94905 339 aa15.18■□□□□ 0.02
MRPL55-205ENST00000366731 EOMESO95936 686 aa15.18■□□□□ 0.02
MRPL55-205ENST00000366731 DNAJB1P25685 340 aa15.18■□□□□ 0.02
MRPL55-205ENST00000366731 HOXA11P31270 313 aaPredicted RBP15.18■□□□□ 0.02
MRPL55-205ENST00000366731 PBX3P40426 434 aa15.18■□□□□ 0.02
MRPL55-205ENST00000366731 KCNQ1P51787 676 aa15.18■□□□□ 0.02
MRPL55-205ENST00000366731 PTENP60484 403 aa15.18■□□□□ 0.02
MRPL55-205ENST00000366731 TJAP1Q5JTD0 557 aa15.18■□□□□ 0.02
MRPL55-205ENST00000366731 ZNF598Q86UK7 904 aaKnown RBP15.18■□□□□ 0.02
MRPL55-205ENST00000366731 THNSL1Q8IYQ7 743 aa15.18■□□□□ 0.02
MRPL55-205ENST00000366731 IGSF22Q8N9C0 903 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms