RNA–Protein interactions for RNA: ENST00000366481.3

TRIM58-201, Transcript of tripartite motif containing 58, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM58, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM58-201ENST00000366481 USP11P51784 963 aa21.23■□□□□ 0.99
TRIM58-201ENST00000366481 IFI35P80217 286 aaPredicted RBP21.23■□□□□ 0.99
TRIM58-201ENST00000366481 LACTBP83111 547 aaPredicted RBP21.23■□□□□ 0.99
TRIM58-201ENST00000366481 COL5A3P25940 1745 aaPredicted RBP21.23■□□□□ 0.99
TRIM58-201ENST00000366481 PPEF1O14829 653 aaPredicted RBP21.23■□□□□ 0.99
TRIM58-201ENST00000366481 CLK2P49760 499 aaKnown RBP21.23■□□□□ 0.99
TRIM58-201ENST00000366481 ALDH5A1P51649 535 aaPredicted RBP21.23■□□□□ 0.99
TRIM58-201ENST00000366481 ALKBH5Q6P6C2 394 aaKnown RBP21.23■□□□□ 0.99
TRIM58-201ENST00000366481 DHX36Q9H2U1 1008 aaKnown RBP21.23■□□□□ 0.99
TRIM58-201ENST00000366481 KCTD10Q9H3F6 313 aa21.23■□□□□ 0.99
TRIM58-201ENST00000366481 KCNK9Q9NPC2 374 aa21.23■□□□□ 0.99
TRIM58-201ENST00000366481 PCDHA2Q9Y5H9 948 aa21.23■□□□□ 0.99
TRIM58-201ENST00000366481 RREB1Q92766 1687 aa21.23■□□□□ 0.99
TRIM58-201ENST00000366481 GOLGA6L10A0A0M3HER8 536 aa21.23■□□□□ 0.99
TRIM58-201ENST00000366481 FAM86B1E9PN63 330 aa21.23■□□□□ 0.99
TRIM58-201ENST00000366481 FAM86B2P0C5J1 330 aa21.23■□□□□ 0.99
TRIM58-201ENST00000366481 ATP11AP98196 1134 aa21.23■□□□□ 0.99
TRIM58-201ENST00000366481 TAF11Q15544 211 aa21.23■□□□□ 0.99
TRIM58-201ENST00000366481 GNPTABQ3T906 1256 aa21.23■□□□□ 0.99
TRIM58-201ENST00000366481 TBC1D10BQ4KMP7 808 aaPredicted RBP21.23■□□□□ 0.99
TRIM58-201ENST00000366481 ANKRD42Q8N9B4 389 aa21.23■□□□□ 0.99
TRIM58-201ENST00000366481 RDH13Q8NBN7 331 aa21.23■□□□□ 0.99
TRIM58-201ENST00000366481 FAM114A2Q9NRY5 505 aa21.23■□□□□ 0.99
TRIM58-201ENST00000366481 NAV1Q8NEY1 1877 aa21.22■□□□□ 0.99
TRIM58-201ENST00000366481 GCNT3O95395 438 aa21.22■□□□□ 0.99
TRIM58-201ENST00000366481 ARHGAP4P98171 946 aa21.22■□□□□ 0.99
TRIM58-201ENST00000366481 CTTNQ14247 550 aaKnown RBP21.22■□□□□ 0.99
TRIM58-201ENST00000366481 CCHCR1Q8TD31 782 aa21.22■□□□□ 0.99
TRIM58-201ENST00000366481 AGAP1Q9UPQ3 857 aa21.22■□□□□ 0.99
TRIM58-201ENST00000366481 MYH1P12882 1939 aa21.22■□□□□ 0.99
TRIM58-201ENST00000366481 CCDC169A6NNP5 214 aa21.22■□□□□ 0.99
TRIM58-201ENST00000366481 AP1G2O75843 785 aa21.22■□□□□ 0.99
TRIM58-201ENST00000366481 AKAP3O75969 853 aa21.22■□□□□ 0.99
TRIM58-201ENST00000366481 PSMD2Q13200 908 aa21.22■□□□□ 0.99
TRIM58-201ENST00000366481 CRY2Q49AN0 593 aa21.22■□□□□ 0.99
TRIM58-201ENST00000366481 THEMIS2Q5TEJ8 643 aa21.22■□□□□ 0.99
TRIM58-201ENST00000366481 NEK9Q8TD19 979 aa21.22■□□□□ 0.99
TRIM58-201ENST00000366481 FAM163AQ96GL9 167 aaPredicted RBP21.22■□□□□ 0.99
TRIM58-201ENST00000366481 SH3GL3Q99963 347 aa21.22■□□□□ 0.99
TRIM58-201ENST00000366481 IGKV6D-41A0A0C4DH26 115 aa21.21■□□□□ 0.99
TRIM58-201ENST00000366481 CFAP73A6NFT4 308 aa21.21■□□□□ 0.99
TRIM58-201ENST00000366481 HLA-DOAP06340 250 aa21.21■□□□□ 0.99
TRIM58-201ENST00000366481 NQO1P15559 274 aaKnown RBP21.21■□□□□ 0.99
TRIM58-201ENST00000366481 ZC2HC1CQ53FD0 456 aaPredicted RBP21.21■□□□□ 0.99
TRIM58-201ENST00000366481 APOBEC3HQ6NTF7 200 aaKnown RBP21.21■□□□□ 0.99
TRIM58-201ENST00000366481 SCFD2Q8WU76 684 aa21.21■□□□□ 0.99
TRIM58-201ENST00000366481 GLG1Q92896 1179 aa21.21■□□□□ 0.99
TRIM58-201ENST00000366481 ARMCX3Q9UH62 379 aaPredicted RBP21.21■□□□□ 0.99
TRIM58-201ENST00000366481 BBOX1O75936 387 aa21.21■□□□□ 0.99
TRIM58-201ENST00000366481 CLSTN1O94985 981 aa21.21■□□□□ 0.99
TRIM58-201ENST00000366481 ABCB4P21439 1286 aa21.21■□□□□ 0.99
TRIM58-201ENST00000366481 SMARCA1P28370 1054 aa21.21■□□□□ 0.99
TRIM58-201ENST00000366481 COBLL1Q53SF7 1204 aa21.21■□□□□ 0.99
TRIM58-201ENST00000366481 RBM46Q8TBY0 533 aaKnown RBP21.21■□□□□ 0.99
TRIM58-201ENST00000366481 RUSC1Q9BVN2 902 aa21.21■□□□□ 0.99
TRIM58-201ENST00000366481 MTFR1LQ9H019 292 aa21.21■□□□□ 0.99
TRIM58-201ENST00000366481 PKD2L1Q9P0L9 805 aa21.21■□□□□ 0.99
TRIM58-201ENST00000366481 CCDC188H7C350 402 aa21.21■□□□□ 0.99
TRIM58-201ENST00000366481 HOXD13P35453 343 aa21.21■□□□□ 0.99
TRIM58-201ENST00000366481 PCK1P35558 622 aa21.21■□□□□ 0.99
TRIM58-201ENST00000366481 ZNF76P36508 570 aa21.21■□□□□ 0.99
TRIM58-201ENST00000366481 EIF3BP55884 814 aaKnown RBP21.21■□□□□ 0.99
TRIM58-201ENST00000366481 ERICH1Q86X53 443 aa21.21■□□□□ 0.99
TRIM58-201ENST00000366481 U2AF1L4Q8WU68 220 aaKnown RBP21.21■□□□□ 0.99
TRIM58-201ENST00000366481 NT5C3AQ9H0P0 336 aa21.21■□□□□ 0.99
TRIM58-201ENST00000366481 CHORDC1Q9UHD1 332 aaPredicted RBP21.21■□□□□ 0.99
TRIM58-201ENST00000366481 MEIS2O14770 477 aa21.2■□□□□ 0.98
TRIM58-201ENST00000366481 UCHL3P15374 230 aa21.2■□□□□ 0.98
TRIM58-201ENST00000366481 ZNF211Q13398 564 aaPredicted RBP21.2■□□□□ 0.98
TRIM58-201ENST00000366481 MAB21L3Q8N8X9 362 aa21.2■□□□□ 0.98
TRIM58-201ENST00000366481 LRRC27Q9C0I9 530 aa21.2■□□□□ 0.98
TRIM58-201ENST00000366481 RAB17Q9H0T7 212 aa21.2■□□□□ 0.98
TRIM58-201ENST00000366481 EBF2Q9HAK2 575 aa21.2■□□□□ 0.98
TRIM58-201ENST00000366481 FRMD4AQ9P2Q2 1039 aaPredicted RBP21.2■□□□□ 0.98
TRIM58-201ENST00000366481 DBR1Q9UK59 544 aaKnown RBP21.2■□□□□ 0.98
TRIM58-201ENST00000366481 DAAM1Q9Y4D1 1078 aa21.2■□□□□ 0.98
TRIM58-201ENST00000366481 PMS2P54278 862 aa21.2■□□□□ 0.98
TRIM58-201ENST00000366481 SLC12A3P55017 1021 aa21.2■□□□□ 0.98
TRIM58-201ENST00000366481 ADCY1Q08828 1119 aa21.2■□□□□ 0.98
TRIM58-201ENST00000366481 SLC29A2Q14542 456 aa21.2■□□□□ 0.98
TRIM58-201ENST00000366481 COG2Q14746 738 aa21.2■□□□□ 0.98
TRIM58-201ENST00000366481 RBBP5Q15291 538 aaKnown RBP21.2■□□□□ 0.98
TRIM58-201ENST00000366481 VPS36Q86VN1 386 aa21.2■□□□□ 0.98
TRIM58-201ENST00000366481 PROM2Q8N271 834 aa21.2■□□□□ 0.98
TRIM58-201ENST00000366481 ZNF570Q96NI8 536 aa21.2■□□□□ 0.98
TRIM58-201ENST00000366481 WNK3Q9BYP7 1800 aa21.2■□□□□ 0.98
TRIM58-201ENST00000366481 GFPT2O94808 682 aa21.19■□□□□ 0.98
TRIM58-201ENST00000366481 NMT1P30419 496 aaKnown RBP21.19■□□□□ 0.98
TRIM58-201ENST00000366481 GIT2Q14161 759 aa21.19■□□□□ 0.98
TRIM58-201ENST00000366481 ZYXQ15942 572 aaKnown RBP21.19■□□□□ 0.98
TRIM58-201ENST00000366481 EXOC3L4Q17RC7 722 aa21.19■□□□□ 0.98
TRIM58-201ENST00000366481 CERKLQ49MI3 558 aaPredicted RBP21.19■□□□□ 0.98
TRIM58-201ENST00000366481 NUGGCQ68CJ6 796 aa21.19■□□□□ 0.98
TRIM58-201ENST00000366481 SH2D3AQ9BRG2 576 aa21.19■□□□□ 0.98
TRIM58-201ENST00000366481 FGFR1OP2Q9NVK5 253 aa21.19■□□□□ 0.98
TRIM58-201ENST00000366481 EML1O00423 815 aa21.19■□□□□ 0.98
TRIM58-201ENST00000366481 PAEPP09466 180 aa21.19■□□□□ 0.98
TRIM58-201ENST00000366481 DR1Q01658 176 aa21.19■□□□□ 0.98
TRIM58-201ENST00000366481 SEMA3FQ13275 785 aa21.19■□□□□ 0.98
TRIM58-201ENST00000366481 GPATCH4Q5T3I0 446 aaKnown RBP21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms