RNA–Protein interactions for RNA: ENST00000365563.1

RNU6-54P-201, Transcript of RNA, U6 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU6-54P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-54P-201ENST00000365563 ELOVL5Q9NYP7 299 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 ZNF214Q9UL59 606 aaPredicted RBP0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 AKT3Q9Y243 479 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 CTDP1Q9Y5B0 961 aaPredicted RBP0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 SLC12A7Q9Y666 1083 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 MUC19Q7Z5P9 8384 aa0.73□□□□□ -2.29
RNU6-54P-201ENST00000365563 POLR2AP24928 1970 aaKnown RBP0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 UNC119BA6NIH7 251 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 LINC01548A6NM66 108 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 ERI2A8K979 691 aaKnown RBP0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 AHRRA9YTQ3 701 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 B4E1Z4 1266 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 NOP56O00567 594 aaKnown RBP0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 PRPF40AO75400 957 aaKnown RBP0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 KCNH1O95259 989 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 FOSP01100 380 aaPredicted RBP0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 IGKV3-20P01619 116 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 ITGAVP06756 1048 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 T-ENOLP0DO92 83 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 EGR2P11161 476 aaPredicted RBP0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 HK1P19367 917 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 WT1P19544 449 aaPredicted RBP0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 PTGS1P23219 599 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 CERS1P27544 350 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 LTBRP36941 435 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 NR4A2P43354 598 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 THBS3P49746 956 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 STAT5BP51692 787 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 ADCY7P51828 1080 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 SOX10P56693 466 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 BPIFB4P59827 614 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 ST5P78524 1137 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 ATP2C1P98194 919 aaPredicted RBP0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 HOXA4Q00056 320 aaPredicted RBP0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 EXOSC10Q01780 885 aaKnown RBP0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 DDR1Q08345 913 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 TCIRG1Q13488 830 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 COL9A2Q14055 689 aaPredicted RBP0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 SEZ6Q53EL9 994 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 OTUD3Q5T2D3 398 aaPredicted RBP0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 ACBD5Q5T8D3 534 aaPredicted RBP0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 FCRLBQ6BAA4 426 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 GRAMD4Q6IC98 578 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 Q6ZNX1 250 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 NEK8Q86SG6 692 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 TMPRSS12Q86WS5 348 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 ANKRD53Q8N9V6 530 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 ASB10Q8WXI3 467 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 DPF1Q92782 380 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 BCANQ96GW7 911 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 WNK4Q96J92 1243 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 RPL10LQ96L21 214 aaKnown RBP0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 PDCD2LQ9BRP1 358 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 TMEM79Q9BSE2 394 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 NDC1Q9BTX1 674 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 BTBD2Q9BX70 525 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 PHAXQ9H814 394 aaKnown RBP0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 CYP26B1Q9NR63 512 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 GALNT8Q9NY28 637 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 TUBA8Q9NY65 449 aaPredicted RBP0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 SERPINA10Q9UK55 444 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 CLCA2Q9UQC9 943 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 EFR3BQ9Y2G0 817 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 PCDHA2Q9Y5H9 948 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 WNT6Q9Y6F9 365 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 NOTCH4Q99466 2003 aa0.72□□□□□ -2.29
RNU6-54P-201ENST00000365563 MINDY4BA8MYZ0 360 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 MGST3O14880 152 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 LINC01565O15544 149 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 SMAD6O43541 496 aaKnown RBP0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 LTFP02788 710 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 JUNP05412 331 aaKnown RBP0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 EPHX1P07099 455 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 GNAT1P11488 350 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 GARTP22102 1010 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 GUCY2CP25092 1073 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 EPHB2P29323 1055 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 ITGAEP38570 1179 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 STAT3P40763 770 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 WASP42768 502 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 NOVP48745 357 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 EPHA5P54756 1037 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 FAM189BP81408 668 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 RHDQ02161 417 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 APOBRQ0VD83 1088 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 ADAM15Q13444 863 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 TP53BP2Q13625 1128 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 MOGSQ13724 837 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 SPIDRQ14159 915 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 TESK1Q15569 626 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 NPY5RQ15761 445 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 GNPTABQ3T906 1256 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 SUMO4Q6EEV6 95 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 GTF2IRD2BQ6EKJ0 949 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 UNC5AQ6ZN44 842 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 KCTD1Q719H9 257 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 OTOP3Q7RTS5 596 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 GTF2IRD2Q86UP8 949 aa0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 DCP1BQ8IZD4 617 aaKnown RBP0.71□□□□□ -2.3
RNU6-54P-201ENST00000365563 ZNF513Q8N8E2 541 aaPredicted RBP0.71□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms