RNA–Protein interactions for RNA: ENST00000360982.2

NCKAP1-201, Transcript of NCK associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene NCKAP1, Length 4,989 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-201ENST00000360982 MID2Q9UJV3 735 aa22.02■■□□□ 1.12
NCKAP1-201ENST00000360982 NTSR2O95665 410 aa22.02■■□□□ 1.12
NCKAP1-201ENST00000360982 NDUFB10O96000 172 aa22.02■■□□□ 1.12
NCKAP1-201ENST00000360982 COASYQ13057 564 aa22.02■■□□□ 1.12
NCKAP1-201ENST00000360982 PDIK1LQ8N165 341 aa22.02■■□□□ 1.12
NCKAP1-201ENST00000360982 MCUQ8NE86 351 aa22.02■■□□□ 1.12
NCKAP1-201ENST00000360982 CALR3Q96L12 384 aaKnown RBP22.02■■□□□ 1.12
NCKAP1-201ENST00000360982 KCNF1Q9H3M0 494 aa22.02■■□□□ 1.12
NCKAP1-201ENST00000360982 FAM8A1Q9UBU6 413 aa22.02■■□□□ 1.12
NCKAP1-201ENST00000360982 SETBP1Q9Y6X0 1596 aa22.02■■□□□ 1.11
NCKAP1-201ENST00000360982 KIAA0391O15091 583 aaKnown RBP22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 GCLMP48507 274 aa22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 COG7P83436 770 aa22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 SATB1Q01826 763 aa22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 SMYD2Q9NRG4 433 aa22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 GINM1Q9NU53 330 aa22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 IRX4P78413 519 aa22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 TSGA10IPQ3SY00 556 aa22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 VCPKMTQ9H867 229 aa22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 USP42Q9H9J4 1324 aaKnown RBP22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 NNMTP40261 264 aa22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 OR6J1Q8NGC5 347 aa22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 SAAL1Q96ER3 474 aa22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 GJB4Q9NTQ9 266 aa22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 ZBTB12Q9Y330 459 aaPredicted RBP22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 SLC4A1P02730 911 aa22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 MSH2P43246 934 aa22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 GMPSP49915 693 aaPredicted RBP22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 HDLBPQ00341 1268 aaKnown RBP22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 SNX1Q13596 522 aa22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 ZNF394Q53GI3 561 aa22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 XKR3Q5GH77 459 aa22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 VPS39Q96JC1 886 aa22.01■■□□□ 1.11
NCKAP1-201ENST00000360982 MIF4GDA9UHW6 222 aaKnown RBP22■■□□□ 1.11
NCKAP1-201ENST00000360982 VEPH1Q14D04 833 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 PHLDB3Q6NSJ2 640 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 RWDD4Q6NW29 188 aaKnown RBP22■■□□□ 1.11
NCKAP1-201ENST00000360982 CDC42EP5Q6NZY7 148 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 ENOSF1Q7L5Y1 443 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 GUF1Q8N442 669 aaKnown RBP22■■□□□ 1.11
NCKAP1-201ENST00000360982 TRIM62Q9BVG3 475 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 ASNSD1Q9NWL6 643 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 POTEFA5A3E0 1075 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 BNIP3LO60238 219 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 POTEIP0CG38 1075 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 NNTQ13423 1086 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 POTEGQ6S5H5 508 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 POTEEQ6S8J3 1075 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 TTC13Q8NBP0 860 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 ALDH8A1Q9H2A2 487 aaPredicted RBP22■■□□□ 1.11
NCKAP1-201ENST00000360982 CEP72Q9P209 647 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 TXNDC9O14530 226 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 TRAPPC3O43617 180 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 IL9RQ01113 521 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 ANKRD13AQ8IZ07 590 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 RBM41Q96IZ5 413 aaKnown RBP22■■□□□ 1.11
NCKAP1-201ENST00000360982 TTC25Q96NG3 672 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 TUFT1Q9NNX1 390 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 HMGB1P1B2RPK0 211 aaPredicted RBP22■■□□□ 1.11
NCKAP1-201ENST00000360982 CETPP11597 493 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 CDC27P30260 824 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 PLTPP55058 493 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 SLMAPQ14BN4 828 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 NAALADL2Q58DX5 795 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 KRT39Q6A163 491 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 OXER1Q8TDS5 423 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 EIF2AK1Q9BQI3 630 aaKnown RBP22■■□□□ 1.11
NCKAP1-201ENST00000360982 PIDD1Q9HB75 910 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 PCDHA13Q9Y5I0 950 aa22■■□□□ 1.11
NCKAP1-201ENST00000360982 KBTBD13C9JR72 458 aa21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 PFDN1O60925 122 aa21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 DPEP1P16444 411 aa21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 PMLP29590 882 aa21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 ITPK1Q13572 414 aa21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 JADE1Q6IE81 842 aa21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 DHX38Q92620 1227 aaKnown RBP21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 GPBP1L1Q9HC44 474 aaPredicted RBP21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 PDIA5Q14554 519 aa21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 EPC1Q9H2F5 836 aa21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 LAMC1P11047 1609 aa21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 CASQ2O14958 399 aaPredicted RBP21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 VAMP7P51809 220 aa21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 HUNKP57058 714 aa21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 CDO1Q16878 200 aa21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 CYP4F22Q6NT55 531 aa21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 TMEM270Q6UE05 265 aa21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 SEPT1Q8WYJ6 367 aa21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 ACAP3Q96P50 834 aa21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 TDP2O95551 362 aa21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 FTCDO95954 541 aa21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 BAATQ14032 418 aaPredicted RBP21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 SMARCAD1Q9H4L7 1026 aa21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 CNOT8Q9UFF9 292 aaKnown RBP21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 HPCAL4Q9UM19 191 aa21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 SUFUQ9UMX1 484 aa21.99■■□□□ 1.11
NCKAP1-201ENST00000360982 DGAT1O75907 488 aa21.98■■□□□ 1.11
NCKAP1-201ENST00000360982 TJP3O95049 919 aa21.98■■□□□ 1.11
NCKAP1-201ENST00000360982 EYA4O95677 639 aa21.98■■□□□ 1.11
NCKAP1-201ENST00000360982 DUOXA2Q1HG44 320 aa21.98■■□□□ 1.11
NCKAP1-201ENST00000360982 DLC1Q96QB1 1528 aa21.98■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms