RNA–Protein interactions for RNA: ENST00000354071.7

BRCA1-202, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 4,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-202ENST00000354071 LINC00116Q8NCU8 138 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 NEDD1Q8NHV4 660 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 UNKQ9C0B0 810 aaKnown RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 CPNE7Q9UBL6 633 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 DUSP13Q9UII6 198 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 KCNH3Q9ULD8 1083 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 A0A087WV62 115 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 POM121BA6NF01 834 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 FAM155AB1AL88 458 aaPredicted RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 FAM227AF5H4B4 570 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 TYRP1P17643 537 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 CASP5P51878 434 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 ADKP55263 362 aaKnown RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 RAB1AP62820 205 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 PPP3CAQ08209 521 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 MUM1Q2TAK8 710 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 PRAMEF9Q5VWM5 478 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 FRMD7Q6ZUT3 714 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 TXNRD3Q86VQ6 643 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 HHIPL1Q96JK4 782 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 FAM193BQ96PV7 902 aaPredicted RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 PPP1R16BQ96T49 567 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 HERPUD2Q9BSE4 406 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 SORBS1Q9BX66 1292 aaKnown RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 GPR62Q9BZJ7 368 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 TMEM60Q9H2L4 133 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 LRRC4CQ9HCJ2 640 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 PRDM7Q9NQW5 492 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 SMC4Q9NTJ3 1288 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 TRMT13Q9NUP7 481 aaKnown RBP2.01□□□□□ -2.09
BRCA1-202ENST00000354071 USP18Q9UMW8 372 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 WASF3Q9UPY6 502 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 TBC1D30Q9Y2I9 924 aa2.01□□□□□ -2.09
BRCA1-202ENST00000354071 NOTOA8MTQ0 251 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 H3BML4 177 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 TSHRP16473 764 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 CNTFP26441 200 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 HNRNPUQ00839 825 aaKnown RBP eCLIP2□□□□□ -2.09
BRCA1-202ENST00000354071 DSC2Q02487 901 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 TRIM28Q13263 835 aaKnown RBP2□□□□□ -2.09
BRCA1-202ENST00000354071 SEPT2Q15019 361 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 KCTD1Q719H9 257 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 GAREM2Q75VX8 874 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 HEATR4Q86WZ0 1026 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 CREG2Q8IUH2 290 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 NGDNQ8NEJ9 315 aaKnown RBP2□□□□□ -2.09
BRCA1-202ENST00000354071 CCT6BQ92526 530 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 VRK1Q99986 396 aaPredicted RBP2□□□□□ -2.09
BRCA1-202ENST00000354071 FDXACB1Q9BRP7 624 aaPredicted RBP2□□□□□ -2.09
BRCA1-202ENST00000354071 G6PC3Q9BUM1 346 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 ZHX3Q9H4I2 956 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 FAM204AQ9H8W3 233 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 PRR13Q9NZ81 148 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 BCCIPQ9P287 314 aaKnown RBP eCLIP2□□□□□ -2.09
BRCA1-202ENST00000354071 CAMTA1Q9Y6Y1 1673 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 A6NCN8 305 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 TRIM38O00635 465 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 MYO1BO43795 1136 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 HIP1RO75146 1068 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 PRPF6O94906 941 aaKnown RBP2□□□□□ -2.09
BRCA1-202ENST00000354071 F13BP05160 661 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 SYN1P17600 705 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 OXCT1P55809 520 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 PCBP3P57721 371 aaKnown RBP2□□□□□ -2.09
BRCA1-202ENST00000354071 EGR3Q06889 387 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 BIRC3Q13489 604 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 TIGD5Q53EQ6 642 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 RALGPS1Q5JS13 557 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 MAATS1Q7Z4T9 603 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 MARCH10Q8NA82 808 aaPredicted RBP2□□□□□ -2.09
BRCA1-202ENST00000354071 TBC1D20Q96BZ9 403 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 MTA3Q9BTC8 594 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 IFT122Q9HBG6 1241 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 C19orf73Q9NVV2 129 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 IMPACTQ9P2X3 320 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 SNX13Q9Y5W8 968 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 FAM234BA2RU67 622 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 AQP12BA6NM10 295 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 RHPN2P1A8MT19 583 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 HARSP12081 509 aaKnown RBP2□□□□□ -2.09
BRCA1-202ENST00000354071 ATP1A3P13637 1013 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 NOP2P46087 812 aaKnown RBP2□□□□□ -2.09
BRCA1-202ENST00000354071 AGFG1P52594 562 aaKnown RBP2□□□□□ -2.09
BRCA1-202ENST00000354071 ADAM9Q13443 819 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 NOLC1Q14978 699 aaKnown RBP eCLIP2□□□□□ -2.09
BRCA1-202ENST00000354071 ANO6Q4KMQ2 910 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 FIGNQ5HY92 759 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 JMJD6Q6NYC1 403 aaPredicted RBP2□□□□□ -2.09
BRCA1-202ENST00000354071 SESTD1Q86VW0 696 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 ZNF354CQ86Y25 554 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 ZZZ3Q8IYH5 903 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 CCDC33Q8N5R6 958 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 ATG16L2Q8NAA4 619 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 OR10H5Q8NGA6 315 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 KLHDC4Q8TBB5 520 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 LRTOMTQ8WZ04 291 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 PGBD4Q96DM1 585 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 GBP4Q96PP9 640 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 SLC39A2Q9NP94 309 aa2□□□□□ -2.09
BRCA1-202ENST00000354071 KCNH7Q9NS40 1196 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms