RNA–Protein interactions for RNA: ENST00000343735.8

CLDN18-202, Transcript of claudin 18, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CLDN18, Length 3,434 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18-202ENST00000343735 COL1A2P08123 1366 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.72□□□□□ -0.69
CLDN18-202ENST00000343735 SEPT4O43236 478 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 SEC31AO94979 1220 aaKnown RBP10.72□□□□□ -0.69
CLDN18-202ENST00000343735 STBD1O95210 358 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 FGFR1OPO95684 399 aaKnown RBP10.72□□□□□ -0.69
CLDN18-202ENST00000343735 LGALS2P05162 132 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 MMP3P08254 477 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 POLGP54098 1239 aaPredicted RBP10.72□□□□□ -0.69
CLDN18-202ENST00000343735 PRAMEF19Q5SWL8 479 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 PPFIBP1Q86W92 1011 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 MYOCDQ8IZQ8 938 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 GLIS3Q8NEA6 775 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 MNS1Q8NEH6 495 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 TCP11Q8WWU5 503 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 PCYT2Q99447 389 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 TSG101Q99816 390 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 KATNAL1Q9BW62 490 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 PCDHB13Q9Y5F0 798 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 UBE4BO95155 1302 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 PPP1R3GB7ZBB8 358 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 ENC1O14682 589 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 ZBTB39O15060 712 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 MSCO60682 206 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 USO1O60763 962 aaKnown RBP10.72□□□□□ -0.69
CLDN18-202ENST00000343735 CASP14P31944 242 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 HNRNPH2P55795 449 aaKnown RBP10.72□□□□□ -0.69
CLDN18-202ENST00000343735 RNASE9P60153 205 aaKnown RBP10.72□□□□□ -0.69
CLDN18-202ENST00000343735 CAPZA3Q96KX2 299 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 IFT74Q96LB3 600 aa10.72□□□□□ -0.69
CLDN18-202ENST00000343735 HIP1RO75146 1068 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 RARBP10826 455 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 PRCPP42785 496 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 GABPB1Q06547 395 aaPredicted RBP10.71□□□□□ -0.69
CLDN18-202ENST00000343735 PPP2R5AQ15172 486 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 MTERF2Q49AM1 385 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 CCDC155Q8N6L0 562 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 PPP1R13BQ96KQ4 1090 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 MRPL44Q9H9J2 332 aaKnown RBP10.71□□□□□ -0.69
CLDN18-202ENST00000343735 INTS13Q9NVM9 706 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 TRPC6Q9Y210 931 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 PHLPP2Q6ZVD8 1323 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 EIF3DO15371 548 aaKnown RBP eCLIP10.71□□□□□ -0.69
CLDN18-202ENST00000343735 MAGEB2O15479 319 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 PLS3P13797 630 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 MATR3P43243 847 aaKnown RBP eCLIP10.71□□□□□ -0.69
CLDN18-202ENST00000343735 PMS1P54277 932 aaKnown RBP10.71□□□□□ -0.69
CLDN18-202ENST00000343735 APBA1Q02410 837 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 UBXN1Q04323 297 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 RBL2Q08999 1139 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 STK4Q13043 487 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 PLCB4Q15147 1175 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 ODR4Q5SWX8 454 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 SPATA1Q5VX52 437 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 PLA2G4FQ68DD2 849 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 FAM178BQ8IXR5 827 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 RETREG2Q8NC44 543 aa10.71□□□□□ -0.69
CLDN18-202ENST00000343735 SYNRGQ9UMZ2 1314 aa10.71□□□□□ -0.7
CLDN18-202ENST00000343735 MCM3APO60318 1980 aa10.71□□□□□ -0.7
CLDN18-202ENST00000343735 NPHP3-ACAD11A0A0J9YXS1 232 aa10.71□□□□□ -0.7
CLDN18-202ENST00000343735 RRN3P2A6NIE6 340 aa10.71□□□□□ -0.7
CLDN18-202ENST00000343735 SFI1A8K8P3 1242 aa10.71□□□□□ -0.7
CLDN18-202ENST00000343735 H3BRB1 525 aa10.71□□□□□ -0.7
CLDN18-202ENST00000343735 ATP4AP20648 1035 aa10.71□□□□□ -0.7
CLDN18-202ENST00000343735 CNGA1P29973 690 aa10.71□□□□□ -0.7
CLDN18-202ENST00000343735 DNM2P50570 870 aa10.71□□□□□ -0.7
CLDN18-202ENST00000343735 NPEPPSP55786 919 aa10.71□□□□□ -0.7
CLDN18-202ENST00000343735 NKX3-2P78367 333 aa10.71□□□□□ -0.7
CLDN18-202ENST00000343735 TBC1D8BQ0IIM8 1120 aa10.71□□□□□ -0.7
CLDN18-202ENST00000343735 TARBP2Q15633 366 aaKnown RBP10.71□□□□□ -0.7
CLDN18-202ENST00000343735 FAM102BQ5T8I3 360 aa10.71□□□□□ -0.7
CLDN18-202ENST00000343735 PPP4R3CPQ6ZMV5 832 aa10.71□□□□□ -0.7
CLDN18-202ENST00000343735 NELFBQ8WX92 580 aa10.71□□□□□ -0.7
CLDN18-202ENST00000343735 SRRTQ9BXP5 876 aaKnown RBP10.71□□□□□ -0.7
CLDN18-202ENST00000343735 TUT1Q9H6E5 874 aaKnown RBP10.71□□□□□ -0.7
CLDN18-202ENST00000343735 DHX33Q9H6R0 707 aaKnown RBP10.71□□□□□ -0.7
CLDN18-202ENST00000343735 WBP1LQ9NX94 342 aa10.71□□□□□ -0.7
CLDN18-202ENST00000343735 GUCA1BQ9UMX6 200 aa10.71□□□□□ -0.7
CLDN18-202ENST00000343735 MAFO75444 373 aaPredicted RBP10.7□□□□□ -0.7
CLDN18-202ENST00000343735 CCNE1P24864 410 aa10.7□□□□□ -0.7
CLDN18-202ENST00000343735 NAP1L1P55209 391 aaKnown RBP10.7□□□□□ -0.7
CLDN18-202ENST00000343735 GJA9P57773 515 aa10.7□□□□□ -0.7
CLDN18-202ENST00000343735 LRRC63Q05C16 580 aa10.7□□□□□ -0.7
CLDN18-202ENST00000343735 CACNB2Q08289 660 aaPredicted RBP10.7□□□□□ -0.7
CLDN18-202ENST00000343735 DMP1Q13316 513 aaPredicted RBP10.7□□□□□ -0.7
CLDN18-202ENST00000343735 TAF3Q5VWG9 929 aa10.7□□□□□ -0.7
CLDN18-202ENST00000343735 SFR1Q86XK3 245 aa10.7□□□□□ -0.7
CLDN18-202ENST00000343735 ANKRD20A12PQ8NF67 263 aa10.7□□□□□ -0.7
CLDN18-202ENST00000343735 HVCN1Q96D96 273 aa10.7□□□□□ -0.7
CLDN18-202ENST00000343735 WDR24Q96S15 920 aa10.7□□□□□ -0.7
CLDN18-202ENST00000343735 PDLIM7Q9NR12 457 aa10.7□□□□□ -0.7
CLDN18-202ENST00000343735 ZNF446Q9NWS9 450 aa10.7□□□□□ -0.7
CLDN18-202ENST00000343735 RNF225M0QZC1 329 aaPredicted RBP10.7□□□□□ -0.7
CLDN18-202ENST00000343735 ZMYND10O75800 440 aa10.7□□□□□ -0.7
CLDN18-202ENST00000343735 EMC2Q15006 297 aa10.7□□□□□ -0.7
CLDN18-202ENST00000343735 IER5Q5VY09 327 aa10.7□□□□□ -0.7
CLDN18-202ENST00000343735 SPIRE2Q8WWL2 714 aa10.7□□□□□ -0.7
CLDN18-202ENST00000343735 P2RX5Q93086 422 aa10.7□□□□□ -0.7
CLDN18-202ENST00000343735 BAG1Q99933 345 aaPredicted RBP10.7□□□□□ -0.7
CLDN18-202ENST00000343735 UPF3AQ9H1J1 476 aaKnown RBP10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms